Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 9.5e-47 190.3 130 100.0
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 2.2e-35 152.5 133 67.7
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 6.2e-22 107.8 114 51.8
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 8.1e-22 107.5 71 70.4
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.1e-21 107.1 85 65.9
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.1e-21 107.1 115 51.3
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.1e-21 107.1 130 53.1
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 1.1e-21 107.1 66 74.2
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.4e-21 106.7 69 69.6
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.4e-21 106.7 115 52.2
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 1.4e-21 106.7 115 51.3
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 1.4e-21 106.7 114 51.8
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.8e-21 106.3 115 51.3
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 1.8e-21 106.3 115 51.3
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 2.4e-21 105.9 66 74.2
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 2.4e-21 105.9 65 70.8
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 2.4e-21 105.9 87 63.2
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 6.8e-21 104.4 84 65.5
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 6.8e-21 104.4 84 65.5
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 6.8e-21 104.4 111 52.3
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 1.2e-20 103.6 85 64.7
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.6e-20 102.4 76 65.8
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 3.4e-20 102.1 128 49.2
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.4e-20 102.1 74 66.2
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.4e-20 102.1 74 66.2
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.4e-20 102.1 74 66.2
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 3.4e-20 102.1 76 65.8
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 3.4e-20 102.1 58 79.3
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 4.4e-20 101.7 84 63.1
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 4.4e-20 101.7 128 48.4
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 4.4e-20 101.7 71 67.6
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 5.8e-20 101.3 58 79.3
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 5.8e-20 101.3 128 47.7
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 7.6e-20 100.9 74 66.2
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 1.3e-19 100.1 68 69.1
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.3e-19 100.1 115 49.6
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.7e-19 99.8 115 48.7
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 1.7e-19 99.8 76 65.8
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 1.7e-19 99.8 77 58.4
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 2.2e-19 99.4 70 62.9
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 2.2e-19 99.4 67 68.7
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 2.9e-19 99.0 68 70.6
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 3.8e-19 98.6 61 72.1
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 4.9e-19 98.2 66 72.7
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 4.9e-19 98.2 68 70.6
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 4.9e-19 98.2 121 47.1
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 6.4e-19 97.8 67 70.1
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 6.4e-19 97.8 60 73.3
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 6.4e-19 97.8 72 68.1
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 8.4e-19 97.4 61 70.5
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 8.4e-19 97.4 63 73.0
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.1e-18 97.1 68 70.6
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.4e-18 96.7 57 73.7
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 1.4e-18 96.7 115 49.6
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 1.4e-18 96.7 115 49.6
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.9e-18 96.3 61 72.1
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.9e-18 96.3 115 49.6
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.9e-18 96.3 64 70.3
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.4e-18 95.9 63 71.4
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.4e-18 95.9 67 70.1
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.2e-18 95.5 60 71.7
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.2e-18 95.5 63 71.4
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 4.2e-18 95.1 115 47.8
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 4.2e-18 95.1 113 47.8
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 5.4e-18 94.7 71 64.8
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 5.4e-18 94.7 113 48.7
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 9.2e-18 94.0 56 75.0
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.6e-17 93.2 55 74.5
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.1e-17 92.8 70 65.7
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.1e-17 92.8 66 66.7
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 2.7e-17 92.4 71 62.0
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 4.6e-17 91.7 76 61.8
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.6e-17 91.7 54 75.9
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 6.0e-17 91.3 53 75.5
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 6.0e-17 91.3 64 70.3
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 7.8e-17 90.9 84 52.4
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 7.8e-17 90.9 71 60.6
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.0e-16 90.5 75 57.3
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.3e-16 90.1 55 72.7
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.3e-16 90.1 58 69.0
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.3e-16 89.4 60 66.7
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 2.3e-16 89.4 74 62.2
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 3.0e-16 89.0 74 62.2
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 3.9e-16 88.6 76 57.9
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 3.9e-16 88.6 152 41.4
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 3.9e-16 88.6 66 62.1
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 8.7e-16 87.4 51 76.5
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 8.7e-16 87.4 55 69.1
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.5e-15 86.7 76 56.6
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.5e-15 86.7 74 62.2
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 1.5e-15 86.7 74 62.2
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.5e-15 86.7 59 64.4
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.9e-15 86.3 75 57.3
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 3.3e-15 85.5 60 63.3
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 5.6e-15 84.7 68 58.8
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 7.3e-15 84.3 66 62.1
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 2.8e-14 82.4 71 57.7
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 3.6e-14 82.0 72 59.7
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.2e-14 81.3 79 55.7
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.1e-13 80.5 61 62.3
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.4e-13 80.1 79 54.4
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 6.9e-13 77.8 66 59.1
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.2e-11 72.8 52 67.3
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 8.4e-11 70.9 115 39.1
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 8.4e-11 70.9 115 40.9
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.1e-10 70.5 85 48.2
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 3.2e-10 68.9 115 39.1
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 3.2e-10 68.9 115 40.9
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 2.1e-09 66.2 69 52.2
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.9e-07 59.7 83 44.6
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 7.3e-07 57.8 67 50.7
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 1.3e-06 57.0 40 67.5
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 1.6e-06 56.6 47 57.4
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 1.6e-06 56.6 47 57.4
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 2.1e-06 56.2 73 45.2
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 6.2e-06 54.7 39 64.1

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (3 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings