Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09144 Striga asiatica HOM05D002238 ORTHO05D007272 7.6e-258 893.3 435 100.0
Migut.A00055 Erythranthe guttata HOM05D002238 ORTHO05D007272 1.9e-139 500.0 411 60.8
Oeu034743.2 Olea europaea HOM05D002238 ORTHO05D007272 2.4e-134 483.0 438 58.7
Cc08_g00970 Coffea canephora HOM05D002238 ORTHO05D007272 2.5e-128 463.0 432 53.7
unitig_32.g11479 Utricularia gibba HOM05D002238 ORTHO05D007272 7.9e-122 441.4 382 56.3
Dinv30168 Davidia involucrata HOM05D002238 ORTHO05D007272 1.0e-121 441.0 436 54.1
Peaxi162Scf00327g00039 Petunia axillaris HOM05D002238 ORTHO05D007272 6.3e-119 431.8 434 50.9
Nitab4.5_0004440g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.1e-118 431.0 388 55.2
Rhsim09G0014000 Rhododendron simsii HOM05D002238 ORTHO05D007272 5.9e-117 425.2 435 51.5
Nitab4.5_0009247g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.5e-115 419.9 368 56.0
PGSC0003DMG400020787 Solanum tuberosum HOM05D002238 ORTHO05D007272 7.2e-115 418.3 385 54.0
Haze_00046 Corylus avellana HOM05D002238 ORTHO05D007272 9.4e-115 417.9 437 49.7
Duzib168G0728 Durio zibethinus HOM05D002238 ORTHO05D007272 1.6e-114 417.2 434 51.6
CSS0032500 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D007272 2.7e-114 416.4 437 50.8
Rhsim02G0195500 Rhododendron simsii HOM05D002238 ORTHO05D007272 4.6e-114 415.6 437 50.6
Lj8C25T21 Lonicera japonica HOM05D002238 ORTHO05D007272 6.7e-113 411.8 435 50.1
TWI32G0967 Tripterygium wilfordii HOM05D002238 ORTHO05D007272 1.5e-112 410.6 436 49.3
Manes.16G120100 Manihot esculenta HOM05D002238 ORTHO05D007272 2.0e-112 410.2 428 50.5
Prupe.1G474900 Prunus persica HOM05D002238 ORTHO05D007272 7.4e-112 408.3 438 46.8
QL09p012798 Quercus lobata HOM05D002238 ORTHO05D007272 1.3e-111 407.5 435 49.0
Rhsim02G0198300 Rhododendron simsii HOM05D002238 ORTHO05D007272 1.3e-111 407.5 437 49.7
Ciclev10010344m.g Citrus clementina HOM05D002238 ORTHO05D007272 2.2e-111 406.8 436 49.5
Sopen08g016790 Solanum pennellii HOM05D002238 ORTHO05D007272 3.7e-111 406.0 385 53.0
Solyc08g061450.3 Solanum lycopersicum HOM05D002238 ORTHO05D007272 4.8e-111 405.6 385 52.7
Actinidia13250 Actinidia chinensis HOM05D002238 ORTHO05D007272 8.2e-111 404.8 389 53.0
Gohir.A09G019700 Gossypium hirsutum HOM05D002238 ORTHO05D007272 1.4e-110 404.1 434 49.3
Sc11g0007780 Simmondsia chinensis HOM05D002238 ORTHO05D007272 2.4e-110 403.3 432 48.4
COL.COLO4_00195 Corchorus olitorius HOM05D002238 ORTHO05D007272 5.3e-110 402.1 434 48.4
Peaxi162Scf00108g00063 Petunia axillaris HOM05D002238 ORTHO05D007272 5.3e-110 402.1 433 49.0
TAR625G0243 Trochodendron aralioides HOM05D002238 ORTHO05D007272 1.5e-109 400.6 420 49.0
Gohir.1Z049673 Gossypium hirsutum HOM05D002238 ORTHO05D007272 2.0e-109 400.2 434 49.3
Gohir.D09G019000 Gossypium hirsutum HOM05D002238 ORTHO05D007272 2.0e-109 400.2 434 49.3
Gorai.006G022700 Gossypium raimondii HOM05D002238 ORTHO05D007272 2.0e-109 400.2 434 49.5
FAN24G3345 Fragaria x ananassa HOM05D002238 ORTHO05D007272 2.6e-109 399.8 416 49.3
FvH4_2g29530 Fragaria vesca HOM05D002238 ORTHO05D007272 1.3e-108 397.5 430 47.7
Thecc.09G149800 Theobroma cacao HOM05D002238 ORTHO05D007272 2.2e-108 396.7 374 52.1
RcHm_v2.0_Chr6g0298391 Rosa chinensis HOM05D002238 ORTHO05D007272 3.8e-108 396.0 427 48.0
MD08G1146200 Malus domestica HOM05D002238 ORTHO05D007272 5.0e-108 395.6 438 46.8
FAN27G0629 Fragaria x ananassa HOM05D002238 ORTHO05D007272 8.5e-108 394.8 430 47.4
FAN20G0928 Fragaria x ananassa HOM05D002238 ORTHO05D007272 1.4e-107 394.0 430 47.4
Nn2g11964 Nelumbo nucifera HOM05D002238 ORTHO05D007272 3.2e-107 392.9 393 50.6
CiPaw.05G262300 Carya illinoinensis HOM05D002238 ORTHO05D007272 2.7e-106 389.8 438 47.5
ClCG05G017070 Citrullus lanatus HOM05D002238 ORTHO05D007272 2.7e-106 389.8 420 47.6
MBI04_g24206_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D007272 3.6e-106 389.4 392 50.3
Aqoxy3G03159 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 4.7e-106 389.0 436 45.9
Glyma.05G173000 Glycine max HOM05D002238 ORTHO05D007272 6.1e-106 388.7 390 50.0
VMungo1215G1712 Vigna mungo HOM05D002238 ORTHO05D007272 1.4e-105 387.5 387 49.1
Lalb_Chr25g0279781 Lupinus albus HOM05D002238 ORTHO05D007272 1.8e-105 387.1 388 52.3
Potri.006G251400 Populus trichocarpa HOM05D002238 ORTHO05D007272 5.1e-105 385.6 438 46.8
PGR042G2797 Punica granatum HOM05D002238 ORTHO05D007272 5.1e-105 385.6 391 50.1
Sed0000756 Sechium edule HOM05D002238 ORTHO05D007272 5.1e-105 385.6 439 46.7
Lj5g0011751 Lotus japonicus HOM05D002238 ORTHO05D007272 6.7e-105 385.2 382 50.0
Eucgr.C01786 Eucalyptus grandis HOM05D002238 ORTHO05D007272 2.6e-104 383.3 390 50.5
DCAR_006233 Daucus carota HOM05D002238 ORTHO05D007272 4.4e-104 382.5 365 53.7
Medtr1g031820 Medicago truncatula HOM05D002238 ORTHO05D001984 7.4e-104 381.7 382 50.0
Peaxi162Scf00002g00372 Petunia axillaris HOM05D002238 ORTHO05D003453 9.7e-104 381.3 371 53.4
CANSAT54G2252 Cannabis sativa HOM05D002238 ORTHO05D007272 6.3e-103 378.6 436 47.7
Ca_12577_v3 Cicer arietinum L. HOM05D002238 ORTHO05D007272 7.0e-102 375.2 387 48.1
TPR.G36878 Trifolium pratense HOM05D002238 ORTHO05D001984 2.6e-101 373.2 380 48.9
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 7.7e-101 371.7 393 48.9
EL10Ac2g04715 Beta vulgaris HOM05D002238 ORTHO05D007272 2.2e-100 370.2 440 47.3
Cpa.g.sc533.2 Carica papaya HOM05D002238 ORTHO05D007272 6.5e-100 368.6 387 49.4
CsaV3_3G046550 Cucumis sativus L. HOM05D002238 ORTHO05D007272 6.5e-100 368.6 391 47.6
AUR62040710 Chenopodium quinoa HOM05D002238 ORTHO05D007272 1.5e-99 367.5 440 46.8
MELO3C003684.2 Cucumis melo HOM05D002238 ORTHO05D007272 2.5e-99 366.7 400 47.0
Ah.16g102520 Amaranthus hybridus HOM05D002238 ORTHO05D007272 7.2e-99 365.2 420 47.9
AUR62012126 Chenopodium quinoa HOM05D002238 ORTHO05D007272 1.2e-98 364.4 387 50.4
PSO349G0250 Papaver somniferum HOM05D002238 ORTHO05D007272 8.8e-97 358.2 393 48.6
Sabra06G0196500 Salix brachista HOM05D002238 ORTHO05D007272 8.8e-97 358.2 436 45.6
Lsat_1_v5_gn_5_105001 Lactuca sativa HOM05D002238 ORTHO05D007272 1.5e-96 357.5 439 46.7
arahy.Tifrunner.gnm1.ann1.U1RD55 Arachis hypogaea HOM05D002238 ORTHO05D007272 2.6e-96 356.7 359 50.7
Psat6g044800 Pisum sativum HOM05D002238 ORTHO05D001984 5.7e-96 355.5 411 44.5
PSO017G3814 Papaver somniferum HOM05D002238 ORTHO05D007272 1.3e-95 354.4 394 48.2
Phvul.003G021200 Phaseolus vulgaris HOM05D002238 ORTHO05D007272 4.8e-95 352.4 367 47.7
Peaxi162Scf00108g00056 Petunia axillaris HOM05D002238 ORTHO05D007272 4.1e-94 349.4 392 47.4
arahy.Tifrunner.gnm1.ann1.TBR9XZ Arachis hypogaea HOM05D002238 ORTHO05D007272 2.9e-92 343.2 353 49.3
arahy.Tifrunner.gnm1.ann1.V2KEMD Arachis hypogaea HOM05D002238 ORTHO05D007272 6.5e-92 342.0 360 49.4
arahy.Tifrunner.gnm1.ann1.BAI8MS Arachis hypogaea HOM05D002238 ORTHO05D007272 9.4e-91 338.2 351 49.9
arahy.Tifrunner.gnm1.ann1.H3G4DQ Arachis hypogaea HOM05D002238 ORTHO05D007272 9.4e-91 338.2 352 50.0
arahy.Tifrunner.gnm1.ann1.NZP3ZD Arachis hypogaea HOM05D002238 ORTHO05D007272 2.7e-90 336.7 348 50.3
Aa31LG11G4600 Aethionema arabicum HOM05D002238 ORTHO05D007272 4.7e-90 335.9 438 43.4
HanXRQChr13g0402681 Helianthus annuus HOM05D002238 ORTHO05D007272 6.1e-90 335.5 384 47.7
AL6G37300 Arabidopsis lyrata HOM05D002238 ORTHO05D007272 6.8e-89 332.0 390 45.4
Carub.0006s2336 Capsella rubella HOM05D002238 ORTHO05D007272 2.6e-88 330.1 435 42.5
AT5G25500 Arabidopsis thaliana HOM05D002238 ORTHO05D007272 5.7e-88 328.9 390 45.6
HPP92_000893 Vanilla planifolia HOM05D002238 ORTHO05D007272 2.2e-87 327.0 387 45.0
C07p42320 Brassica napus HOM05D002238 ORTHO05D007272 3.7e-87 326.2 393 45.8
Sp2g22030 Schrenkiella parvula HOM05D002238 ORTHO05D007272 3.7e-87 326.2 438 42.7
arahy.Tifrunner.gnm1.ann1.Z0G856 Arachis hypogaea HOM05D002238 ORTHO05D007272 4.8e-87 325.9 402 45.3
BolC7t44761H Brassica oleracea HOM05D002238 ORTHO05D007272 6.3e-87 325.5 393 45.8
Thhalv10005310m.g Eutrema salsugineum HOM05D002238 ORTHO05D007272 8.3e-87 325.1 393 45.3
THA.LOC104810431 Tarenaya hassleriana HOM05D002238 ORTHO05D007272 2.4e-86 323.6 393 44.3
CARHR187880 Cardamine hirsuta HOM05D002238 ORTHO05D007272 4.1e-86 322.8 388 45.1
C02p59480 Brassica napus HOM05D002238 ORTHO05D007272 1.2e-85 321.2 389 44.7
Nitab4.5_0009119g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.6e-85 320.9 324 50.6
BolC2t12011H Brassica oleracea HOM05D002238 ORTHO05D007272 2.7e-85 320.1 389 45.5
A02p39700 Brassica napus HOM05D002238 ORTHO05D007272 5.0e-84 315.8 389 44.2
BraA02t08935Z Brassica rapa HOM05D002238 ORTHO05D007272 1.9e-83 313.9 389 43.7
GSVIVG01035523001 Vitis vinifera HOM05D002238 ORTHO05D007272 4.2e-83 312.8 439 43.1
SHI18572 Sapria himalayana HOM05D002238 ORTHO05D007272 5.7e-80 302.4 394 41.6
Nitab4.5_0017994g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.5e-77 293.1 295 51.5
BraA06t26543Z Brassica rapa HOM05D002238 ORTHO05D007272 3.3e-75 286.6 302 50.3
QL01p053808 Quercus lobata HOM05D002238 ORTHO05D007272 3.6e-74 283.1 257 56.4
Peaxi162Scf00365g00022 Petunia axillaris HOM05D002238 ORTHO05D007272 2.6e-72 276.9 419 41.3
Zm00001eb090760 Zea mays HOM05D002238 ORTHO05D007272 3.6e-66 256.5 426 37.1
Glyma.09G122801 Glycine max HOM05D002238 ORTHO05D007272 8.9e-65 251.9 196 59.7
ECA233G3411 Erigeron canadensis HOM05D002238 ORTHO05D007272 2.6e-64 250.4 227 52.4
ATR1156G046 Amborella trichopoda HOM05D002238 ORTHO05D007272 7.0e-62 242.3 268 47.0
Atru.chr7.2387 Acer truncatum HOM05D002238 ORTHO05D007272 3.0e-60 236.9 174 66.1
MD15G1119600 Malus domestica HOM05D002238 ORTHO05D007272 3.0e-60 236.9 232 53.4
Os11g0207300 Oryza sativa ssp. japonica HOM05D002238 ORTHO05D007272 8.6e-60 235.3 316 42.1
Duzib187G0736 Durio zibethinus HOM05D002238 ORTHO05D007272 2.8e-58 230.3 208 54.8
Nitab4.5_0004440g0040 Nicotiana tabacum HOM05D002238 ORTHO05D007272 8.9e-57 225.3 171 63.2
SalBow7G3196 Salvia bowleyana HOM05D002238 ORTHO05D007272 8.3e-55 218.8 429 34.7
Aqoxy5G03332 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 4.1e-54 216.5 296 37.8
SalBow6G2105 Salvia bowleyana HOM05D002238 ORTHO05D007272 1.3e-52 211.5 432 33.6
QL10p065634 Quercus lobata HOM05D002238 ORTHO05D007272 5.8e-48 196.1 246 43.5
SEGI_41370 Sequoiadendron giganteum HOM05D002238 ORTHO05D007272 5.8e-48 196.1 375 31.2
MD15G1122300 Malus domestica HOM05D002238 ORTHO05D007272 1.4e-46 191.4 274 41.6
BcaNung07110 Brassica carinata HOM05D002238 ORTHO05D007272 6.0e-45 186.0 178 51.1
Peaxi162Scf00108g00048 Petunia axillaris HOM05D002238 ORTHO05D007272 2.3e-44 184.1 195 50.8
Nitab4.5_0013543g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.6e-42 176.8 135 61.5
Nitab4.5_0011728g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.9e-38 164.5 323 33.1
Peaxi162Scf00015g02010 Petunia axillaris HOM05D002238 ORTHO05D004044 2.4e-38 164.1 192 46.9
Nitab4.5_0012587g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.1e-33 147.1 278 33.5
Atru.chr7.2264 Acer truncatum HOM05D002238 ORTHO05D007272 1.5e-32 144.8 185 40.5
BcaB07g29994 Brassica carinata HOM05D002238 ORTHO05D007272 2.1e-29 134.4 178 42.1
MD15G1118500 Malus domestica HOM05D002238 ORTHO05D007272 2.1e-29 134.4 115 56.5
Nitab4.5_0011591g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.5e-29 133.7 110 60.0
Nitab4.5_0002007g0110 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.9e-28 130.2 111 58.6
A06p36210 Brassica napus HOM05D002238 ORTHO05D007272 1.9e-27 127.9 162 46.9
Nitab4.5_0002007g0090 Nicotiana tabacum HOM05D002238 ORTHO05D007272 9.0e-25 119.0 103 58.3
QL10p065406 Quercus lobata HOM05D002238 ORTHO05D007272 9.0e-25 119.0 245 31.8
Nitab4.5_0011728g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.5e-19 101.7 112 42.9
Nitab4.5_0012587g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.1e-18 97.8 112 41.1
Nitab4.5_0002007g0100 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.9e-11 74.7 87 37.9
Nitab4.5_0011591g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.7e-10 70.5 70 42.9
Peaxi162Scf00015g02018 Petunia axillaris HOM05D002238 ORTHO05D026268 4.2e-06 57.0 52 48.1

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (7 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (4 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (15 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (8 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (4 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings