Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00570 Striga asiatica HOM05D005373 ORTHO05D006617 3.0e-154 548.5 288 100.0
SalBow4G0280 Salvia bowleyana HOM05D005373 ORTHO05D006617 7.0e-50 201.8 104 92.3
MSTRG.18297 Avicennia marina HOM05D005373 ORTHO05D006617 1.2e-49 201.1 105 91.4
Migut.D00388 Erythranthe guttata HOM05D005373 ORTHO05D006617 1.2e-49 201.1 104 93.3
SGA_v2.0_scaffold138G35268 Striga asiatica HOM05D005373 ORTHO05D006617 1.2e-49 201.1 104 92.3
Oeu002282.1 Olea europaea HOM05D001069 ORTHO05D001549 5.0e-48 195.7 104 89.4
Cc01_g18740 Coffea canephora HOM05D005373 ORTHO05D006617 4.2e-47 192.6 104 88.5
unitig_26.g10142 Utricularia gibba HOM05D005373 ORTHO05D006617 5.5e-47 192.2 107 85.0
Actinidia21168 Actinidia chinensis HOM05D005373 ORTHO05D006617 2.7e-46 189.9 106 84.0
ClCG07G000650 Citrullus lanatus HOM05D005373 ORTHO05D006617 3.6e-46 189.5 104 85.6
Solyc12g099820.1 Solanum lycopersicum HOM05D005373 ORTHO05D006617 4.7e-46 189.1 104 88.5
Sopen12g034450 Solanum pennellii HOM05D005373 ORTHO05D006617 4.7e-46 189.1 104 88.5
Duzib211G0177 Durio zibethinus HOM05D005373 ORTHO05D006617 6.1e-46 188.7 104 85.6
MELO3C014306.2 Cucumis melo HOM05D005373 ORTHO05D006617 8.0e-46 188.3 104 85.6
CsaV3_2G013670 Cucumis sativus L. HOM05D005373 ORTHO05D006617 8.0e-46 188.3 104 85.6
Rhsim12G0063100 Rhododendron simsii HOM05D005373 ORTHO05D006617 8.0e-46 188.3 104 85.6
Sc02g0003290 Simmondsia chinensis HOM05D005373 ORTHO05D006617 8.0e-46 188.3 104 86.5
THA.LOC104821383 Tarenaya hassleriana HOM05D005373 ORTHO05D006617 8.0e-46 188.3 104 85.6
MSTRG.21508 Avicennia marina HOM05D005373 ORTHO05D006617 1.0e-45 188.0 104 86.5
Cpa.g.sc52.142 Carica papaya HOM05D005373 ORTHO05D006617 1.0e-45 188.0 104 84.6
Sed0003924 Sechium edule HOM05D005373 ORTHO05D006617 1.4e-45 187.6 104 84.6
Thecc.01G266100 Theobroma cacao HOM05D005373 ORTHO05D006617 1.8e-45 187.2 104 83.7
Actinidia24948 Actinidia chinensis HOM05D005373 ORTHO05D006617 2.3e-45 186.8 126 76.2
COL.COLO4_08280 Corchorus olitorius HOM05D005373 ORTHO05D006617 2.3e-45 186.8 104 84.6
COL.COLO4_29457 Corchorus olitorius HOM05D005373 ORTHO05D006617 2.3e-45 186.8 104 84.6
AT3G49100 Arabidopsis thaliana HOM05D005373 ORTHO05D006617 3.0e-45 186.4 104 84.6
CAN.G575.93 Capsicum annuum HOM05D005373 ORTHO05D006617 3.0e-45 186.4 104 87.5
Dinv22468 Davidia involucrata HOM05D005373 ORTHO05D006617 3.0e-45 186.4 104 85.6
CARHR157930 Cardamine hirsuta HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 84.6
AUR62013793 Chenopodium quinoa HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 83.7
AUR62023362 Chenopodium quinoa HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 83.7
DCAR_012520 Daucus carota HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 85.6
Gohir.A08G188600 Gossypium hirsutum HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 83.7
Gohir.D08G207000 Gossypium hirsutum HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 83.7
Gorai.004G219200 Gossypium raimondii HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 83.7
Nitab4.5_0002310g0090 Nicotiana tabacum HOM05D005373 ORTHO05D006617 4.0e-45 186.0 106 85.8
Sp5g12980 Schrenkiella parvula HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 84.6
TAR633G1352 Trochodendron aralioides HOM05D005373 ORTHO05D006617 4.0e-45 186.0 104 83.7
AL5G28610 Arabidopsis lyrata HOM05D005373 ORTHO05D006617 5.2e-45 185.7 104 83.7
EL10Ac1g00710 Beta vulgaris HOM05D005373 ORTHO05D006617 5.2e-45 185.7 104 84.6
QL04p081438 Quercus lobata HOM05D005373 ORTHO05D006617 5.2e-45 185.7 103 83.5
QL12p042863 Quercus lobata HOM05D005373 ORTHO05D006617 6.8e-45 185.3 103 83.5
Hund17126 Selenicereus undatus HOM05D005373 ORTHO05D006617 6.8e-45 185.3 104 83.7
Atru.chr5.1594 Acer truncatum HOM05D005373 ORTHO05D006617 8.8e-45 184.9 104 82.7
CSS0017854 Camellia sinensis var. sinensis HOM05D005373 ORTHO05D006617 8.8e-45 184.9 104 83.7
Carub.0005s1529 Capsella rubella HOM05D005373 ORTHO05D006617 8.8e-45 184.9 104 83.7
Manes.01G200900 Manihot esculenta HOM05D005373 ORTHO05D006617 8.8e-45 184.9 104 83.7
GSVIVG01000751001 Vitis vinifera HOM05D005373 ORTHO05D006617 8.8e-45 184.9 104 83.7
BcaB02g09576 Brassica carinata HOM05D005373 ORTHO05D006617 1.2e-44 184.5 104 82.7
Rhsim01G0268500 Rhododendron simsii HOM05D005373 ORTHO05D006617 1.2e-44 184.5 104 82.7
RcHm_v2.0_Chr6g0289311 Rosa chinensis HOM05D005373 ORTHO05D006617 1.2e-44 184.5 104 83.7
Cfa002338 Carpinus fangiana HOM05D005373 ORTHO05D006617 1.5e-44 184.1 104 83.7
Peaxi162Scf00700g00135 Petunia axillaris HOM05D005373 ORTHO05D006617 1.5e-44 184.1 104 83.7
PGSC0003DMG400004717 Solanum tuberosum HOM05D005373 ORTHO05D006617 1.5e-44 184.1 106 86.8
THA.LOC104818165 Tarenaya hassleriana HOM05D005373 ORTHO05D006617 1.5e-44 184.1 104 83.7
Migut.N02186 Erythranthe guttata HOM05D005373 ORTHO05D006617 2.6e-44 183.3 104 84.6
FvH4_2g22310 Fragaria vesca HOM05D005373 ORTHO05D006617 2.6e-44 183.3 104 82.7
FAN20G0018 Fragaria x ananassa HOM05D005373 ORTHO05D006617 2.6e-44 183.3 104 82.7
FAN24G2777 Fragaria x ananassa HOM05D005373 ORTHO05D006617 2.6e-44 183.3 104 82.7
PGR102G1093 Punica granatum HOM05D005373 ORTHO05D006617 2.6e-44 183.3 104 82.7
Aa31LG4G17560 Aethionema arabicum HOM05D005373 ORTHO05D006617 3.4e-44 183.0 105 84.8
Thhalv10010849m.g Eutrema salsugineum HOM05D005373 ORTHO05D006617 3.4e-44 183.0 104 82.7
Ciclev10023009m.g Citrus clementina HOM05D005373 ORTHO05D006617 4.4e-44 182.6 104 81.7
BcaC07g39386 Brassica carinata HOM05D005373 ORTHO05D006617 5.7e-44 182.2 104 82.7
A06p18650 Brassica napus HOM05D005373 ORTHO05D006617 5.7e-44 182.2 104 82.7
C08p24090 Brassica napus HOM05D005373 ORTHO05D006617 5.7e-44 182.2 104 82.7
BolC8t50030H Brassica oleracea HOM05D005373 ORTHO05D006617 5.7e-44 182.2 104 82.7
BraA06t24943Z Brassica rapa HOM05D005373 ORTHO05D006617 5.7e-44 182.2 104 82.7
CiPaw.02G033000 Carya illinoinensis HOM05D005373 ORTHO05D006617 5.7e-44 182.2 104 82.7
CiPaw.04G182700 Carya illinoinensis HOM05D005373 ORTHO05D006617 5.7e-44 182.2 104 82.7
MBI04_g39243_MAGBIO Magnolia biondii HOM05D005373 ORTHO05D006617 7.5e-44 181.8 104 79.8
MD05G1204500 Malus domestica HOM05D005373 ORTHO05D006617 7.5e-44 181.8 104 82.7
MD10G1191500 Malus domestica HOM05D005373 ORTHO05D006617 7.5e-44 181.8 104 82.7
TAR365G0879 Trochodendron aralioides HOM05D005373 ORTHO05D006617 7.5e-44 181.8 104 80.8
Aqoxy2G03557 Aquilegia oxysepala HOM05D005373 ORTHO05D006617 9.8e-44 181.4 104 80.8
BraA06t25747Z Brassica rapa HOM05D005373 ORTHO05D006617 9.8e-44 181.4 104 80.8
Gorai.007G142700 Gossypium raimondii HOM05D005373 ORTHO05D006617 9.8e-44 181.4 104 83.7
A06p28050 Brassica napus HOM05D005373 ORTHO05D006617 1.3e-43 181.0 104 80.8
Dinv34577 Davidia involucrata HOM05D005373 ORTHO05D006617 1.3e-43 181.0 104 82.7
Nn1g02594 Nelumbo nucifera HOM05D005373 ORTHO05D006617 1.3e-43 181.0 104 80.8
Potri.002G043600 Populus trichocarpa HOM05D005373 ORTHO05D006617 1.7e-43 180.6 104 81.7
Prupe.8G230800 Prunus persica HOM05D005373 ORTHO05D006617 1.7e-43 180.6 104 80.8
BcaB01g00749 Brassica carinata HOM05D005373 ORTHO05D006617 2.8e-43 179.9 104 80.8
CSS0009352 Camellia sinensis var. sinensis HOM05D005373 ORTHO05D006617 2.8e-43 179.9 104 82.7
FAN15G3255 Fragaria x ananassa HOM05D005373 ORTHO05D006617 2.8e-43 179.9 104 81.7
Psat4g197520 Pisum sativum HOM05D005373 ORTHO05D006617 2.8e-43 179.9 104 79.8
TPR.G35732 Trifolium pratense HOM05D005373 ORTHO05D006617 2.8e-43 179.9 104 79.8
vmacro11045 Vaccinium macrocarpon HOM05D005373 ORTHO05D006617 2.8e-43 179.9 104 81.7
arahy.Tifrunner.gnm1.ann1.W8F73Z Arachis hypogaea HOM05D005373 ORTHO05D006617 3.7e-43 179.5 141 64.5
Medtr1g070460 Medicago truncatula HOM05D005373 ORTHO05D006617 3.7e-43 179.5 104 79.8
PSO832G1599 Papaver somniferum HOM05D005373 ORTHO05D006617 3.7e-43 179.5 104 78.8
CANSAT11G1068 Cannabis sativa HOM05D005373 ORTHO05D006617 4.8e-43 179.1 104 79.8
Lj5g0027817 Lotus japonicus HOM05D005373 ORTHO05D006617 4.8e-43 179.1 104 78.8
Eucgr.B01502 Eucalyptus grandis HOM05D005373 ORTHO05D006617 6.3e-43 178.7 104 79.8
TWI18G0681 Tripterygium wilfordii HOM05D005373 ORTHO05D006617 6.3e-43 178.7 104 79.8
BcaC01g02388 Brassica carinata HOM05D005373 ORTHO05D006617 8.3e-43 178.3 104 79.8
BolC3t18839H Brassica oleracea HOM05D005373 ORTHO05D006617 8.3e-43 178.3 104 79.8
Duzib138G0987 Durio zibethinus HOM05D005373 ORTHO05D006617 8.3e-43 178.3 105 82.9
Potri.005G219400 Populus trichocarpa HOM05D005373 ORTHO05D006617 8.3e-43 178.3 104 79.8
Zm00001eb281280 Zea mays HOM05D005373 ORTHO05D006617 1.4e-42 177.6 139 65.5
CANSAT01G0877 Cannabis sativa HOM05D005373 ORTHO05D006617 1.8e-42 177.2 104 78.8
Lalb_Chr19g0125981 Lupinus albus HOM05D005373 ORTHO05D006617 1.8e-42 177.2 104 78.8
Phvul.008G134200 Phaseolus vulgaris HOM05D005373 ORTHO05D006617 1.8e-42 177.2 104 77.9
Glyma.08G346000 Glycine max HOM05D005373 ORTHO05D006617 2.4e-42 176.8 104 77.9
ECA248G2609 Erigeron canadensis HOM05D005373 ORTHO05D006617 3.1e-42 176.4 104 84.6
Glyma.18G156300 Glycine max HOM05D005373 ORTHO05D006617 3.1e-42 176.4 104 77.9
Lalb_Chr03g0041301 Lupinus albus HOM05D005373 ORTHO05D006617 3.1e-42 176.4 104 76.9
Nn3g19526 Nelumbo nucifera HOM05D005373 ORTHO05D006617 3.1e-42 176.4 110 77.3
TPR.G2468 Trifolium pratense HOM05D005373 ORTHO05D006617 3.1e-42 176.4 104 76.9
C03p65820 Brassica napus HOM05D005373 ORTHO05D006617 4.1e-42 176.0 104 78.8
HanXRQChr01g0005311 Helianthus annuus HOM05D005373 ORTHO05D006617 4.1e-42 176.0 104 83.7
HanXRQChr06g0164391 Helianthus annuus HOM05D005373 ORTHO05D006617 4.1e-42 176.0 104 83.7
ATR0665G560 Amborella trichopoda HOM05D005373 ORTHO05D006617 9.1e-42 174.9 104 78.8
Lsat_1_v5_gn_5_186641 Lactuca sativa HOM05D005373 ORTHO05D006617 9.1e-42 174.9 104 83.7
HPP92_008005 Vanilla planifolia HOM05D005373 ORTHO05D006617 2.0e-41 173.7 104 76.0
Glyma.10G032800 Glycine max HOM05D005373 ORTHO05D006617 2.7e-41 173.3 104 76.9
Glyma.02G141101 Glycine max HOM05D005373 ORTHO05D006617 3.5e-41 172.9 104 77.9
Zm00001eb379840 Zea mays HOM05D005373 ORTHO05D006617 2.2e-40 170.2 104 76.9
Haze_24544 Corylus avellana HOM05D005373 ORTHO05D006617 8.5e-40 168.3 130 66.2
arahy.Tifrunner.gnm1.ann1.ZBI3RA Arachis hypogaea HOM05D005373 ORTHO05D006617 1.1e-39 167.9 130 65.4
PSO063G5966 Papaver somniferum HOM05D005373 ORTHO05D006617 1.1e-39 167.9 104 76.9
AagrBONN_evm.TU.Sc2ySwM_344.4653 Anthoceros agrestis HOM05D005373 ORTHO05D006617 3.0e-37 159.8 104 72.1
Ah.05g177620 Amaranthus hybridus HOM05D005373 ORTHO05D006617 4.0e-37 159.5 167 52.7
Mapoly0042s0050 Marchantia polymorpha HOM05D005373 ORTHO05D006617 7.5e-36 155.2 104 70.2
Pp3c14_7880 Physcomitrium patens HOM05D005373 ORTHO05D006617 3.7e-35 152.9 104 70.2
Pp3c2_1790 Physcomitrium patens HOM05D005373 ORTHO05D006617 4.1e-34 149.4 104 67.3
Hma1.2p1_1029F.1_g249680 Hydrangea macrophylla HOM05D005373 ORTHO05D006617 7.0e-34 148.7 78 87.2
CSS0047138 Camellia sinensis var. sinensis HOM05D005373 ORTHO05D006617 1.7e-32 144.1 104 72.1
CDE06G2230 Ceratophyllum demersum HOM05D005373 ORTHO05D006617 3.8e-32 142.9 88 77.3
Sabra02G0035300 Salix brachista HOM05D005373 ORTHO05D006617 8.6e-32 141.7 128 60.2
Gohir.D11G133500 Gossypium hirsutum HOM05D005373 ORTHO05D006617 8.0e-30 135.2 76 86.8
Gohir.A11G127860 Gossypium hirsutum HOM05D005373 ORTHO05D006617 1.2e-28 131.3 76 85.5
CBR_g18652 Chara braunii HOM05D005373 ORTHO05D006617 3.2e-26 123.2 106 58.5
Sed0007692 Sechium edule HOM05D005373 ORTHO05D006617 1.2e-22 111.3 80 70.0
Atru.chr7.944 Acer truncatum HOM05D005373 ORTHO05D006617 2.6e-20 103.6 57 78.9
Gohir.A12G149900 Gossypium hirsutum HOM05D005373 ORTHO05D006617 2.6e-20 103.6 57 86.0
Atru.chr2.3918 Acer truncatum HOM05D005373 ORTHO05D006617 2.2e-19 100.5 58 82.8
PRCOL_00002130 Prasinoderma coloniale HOM05D005373 ORTHO05D006617 1.0e-16 91.7 75 52.0
Cre12.g546250 Chlamydomonas reinhardtii HOM05D005373 ORTHO05D006617 1.7e-16 90.9 75 52.0
CSS0032008 Camellia sinensis var. sinensis HOM05D005373 ORTHO05D006617 2.3e-16 90.5 53 83.0
Gohir.A10G156200 Gossypium hirsutum HOM05D005373 ORTHO05D006617 8.6e-16 88.6 55 80.0
TWI36G0734 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 8.6e-16 88.6 56 76.8
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 3.1e-13 80.1 53 79.2
SGA_v2.0_scaffold36G14430 Striga asiatica HOM05D005373 ORTHO05D403345 1.3e-11 74.7 65 69.2

Acer truncatum (3 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (4 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings