Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05185 Striga asiatica HOM05D000001 ORTHO05D022897 8.4e-82 307.0 158 100.0
SGA_v2.0_scaffold10G05189 Striga asiatica HOM05D000001 ORTHO05D022897 3.3e-78 295.0 155 97.4
SGA_v2.0_scaffold10G05186 Striga asiatica HOM05D000001 ORTHO05D022897 1.3e-74 283.1 157 93.6
SGA_v2.0_scaffold12G06307 Striga asiatica HOM05D000001 ORTHO05D000003 2.3e-55 219.2 150 79.3
SGA_v2.0_scaffold10G05181 Striga asiatica HOM05D000001 ORTHO05D022897 2.1e-48 196.1 115 89.6
Migut.H02526 Erythranthe guttata HOM05D000001 ORTHO05D000003 1.3e-26 123.6 104 61.5
CSS0009634 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 1.7e-18 96.7 104 50.0
Haze_15061 Corylus avellana HOM05D000001 ORTHO05D000003 6.6e-18 94.7 104 49.0
FvH4_1g12800 Fragaria vesca HOM05D000001 ORTHO05D000003 4.3e-17 92.0 94 45.7
Dinv39141 Davidia involucrata HOM05D000001 ORTHO05D000003 7.3e-17 91.3 104 49.0
QL06p047118 Quercus lobata HOM05D000001 ORTHO05D000003 9.5e-17 90.9 105 46.7
FAN19G2060 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.2e-16 90.5 94 44.7
Cc07_g09860 Coffea canephora HOM05D000001 ORTHO05D000003 2.8e-16 89.4 104 48.1
Dinv13497 Davidia involucrata HOM05D000001 ORTHO05D000003 1.1e-15 87.4 94 50.0
HanXRQChr07g0191641 Helianthus annuus HOM05D000001 ORTHO05D000003 4.0e-15 85.5 104 46.2
CiPaw.01G044600 Carya illinoinensis HOM05D000001 ORTHO05D000003 5.2e-15 85.1 106 44.3
RcHm_v2.0_Chr2g0100941 Rosa chinensis HOM05D000001 ORTHO05D000003 5.2e-15 85.1 104 44.2
Cfa004340 Carpinus fangiana HOM05D000001 ORTHO05D000003 1.2e-14 84.0 104 47.1
ClCG07G001640 Citrullus lanatus HOM05D000001 ORTHO05D000003 1.2e-14 84.0 104 42.3
Lsat_1_v5_gn_2_79280 Lactuca sativa HOM05D000001 ORTHO05D000003 1.2e-14 84.0 104 48.1
SalBow1G0226 Salvia bowleyana HOM05D000001 ORTHO05D000003 1.2e-14 84.0 55 67.3
FvH4_1g12840 Fragaria vesca HOM05D000001 ORTHO05D012013 1.5e-14 83.6 105 41.9
MD02G1143600 Malus domestica HOM05D000001 ORTHO05D000003 2.6e-14 82.8 104 43.3
MELO3C030763.2 Cucumis melo HOM05D000001 ORTHO05D000003 4.4e-14 82.0 104 42.3
PGSC0003DMG400010442 Solanum tuberosum HOM05D000001 ORTHO05D000003 5.8e-14 81.6 94 44.7
Atru.BG.113.p Acer truncatum HOM05D000001 ORTHO05D000003 1.3e-13 80.5 68 55.9
Manes.01G138200 Manihot esculenta HOM05D000001 ORTHO05D000003 1.3e-13 80.5 104 46.2
Gohir.A11G182750 Gossypium hirsutum HOM05D000001 ORTHO05D000003 2.2e-13 79.7 62 59.7
Nitab4.5_0006282g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000003 6.4e-13 78.2 94 43.6
CsaV3_4G027330 Cucumis sativus L. HOM05D000001 ORTHO05D000003 8.3e-13 77.8 110 41.8
Lalb_Chr07g0195431 Lupinus albus HOM05D000001 ORTHO05D000003 8.3e-13 77.8 79 49.4
Sabra07G0018800 Salix brachista HOM05D000001 ORTHO05D000003 8.3e-13 77.8 103 44.7
Sopen02g017800 Solanum pennellii HOM05D000001 ORTHO05D000003 8.3e-13 77.8 102 43.1
Eucgr.I02411 Eucalyptus grandis HOM05D000001 ORTHO05D000003 1.1e-12 77.4 98 44.9
Prupe.7G158100 Prunus persica HOM05D000001 ORTHO05D000003 1.4e-12 77.0 55 61.8
Thecc.01G031400 Theobroma cacao HOM05D000001 ORTHO05D000003 1.4e-12 77.0 104 42.3
Duzib187G1962 Durio zibethinus HOM05D000001 ORTHO05D000003 3.2e-12 75.9 105 40.0
Glyma.18G151600 Glycine max HOM05D000001 ORTHO05D000003 3.2e-12 75.9 70 55.7
GSVIVG01018922001 Vitis vinifera HOM05D000001 ORTHO05D000003 3.2e-12 75.9 97 42.3
Lsat_1_v5_gn_2_77520 Lactuca sativa HOM05D000001 ORTHO05D000003 4.1e-12 75.5 55 61.8
Cpa.g.sc6.154 Carica papaya HOM05D000001 ORTHO05D000003 5.4e-12 75.1 67 46.3
arahy.Tifrunner.gnm1.ann1.7QDM7Z Arachis hypogaea HOM05D000001 ORTHO05D000003 7.1e-12 74.7 56 60.7
Gohir.D11G189350 Gossypium hirsutum HOM05D000001 ORTHO05D000003 7.1e-12 74.7 117 41.0
Gorai.007G201600 Gossypium raimondii HOM05D000001 ORTHO05D000003 7.1e-12 74.7 117 41.0
SHI08638 Sapria himalayana HOM05D000001 ORTHO05D000003 7.1e-12 74.7 57 57.9
Actinidia19198 Actinidia chinensis HOM05D000001 ORTHO05D000003 9.2e-12 74.3 108 43.5
Ciclev10025033m.g Citrus clementina HOM05D000001 ORTHO05D000003 9.2e-12 74.3 53 64.2
Glyma.03G081800 Glycine max HOM05D000001 ORTHO05D000003 9.2e-12 74.3 59 61.0
Solyc02g068630.1 Solanum lycopersicum HOM05D000001 ORTHO05D000003 9.2e-12 74.3 94 42.6
HPP92_006257 Vanilla planifolia HOM05D000001 ORTHO05D000003 9.2e-12 74.3 53 62.3
Oeu023338.1 Olea europaea HOM05D000001 ORTHO05D000003 1.2e-11 73.9 55 56.4
Sed0004420 Sechium edule HOM05D000001 ORTHO05D000003 1.2e-11 73.9 109 42.2
Lj4g0019707 Lotus japonicus HOM05D000001 ORTHO05D000003 1.6e-11 73.6 55 58.2
Nitab4.5_0003379g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.6e-11 73.6 58 55.2
Rhsim08G0074500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.6e-11 73.6 96 41.7
Sc16g0002580 Simmondsia chinensis HOM05D000001 ORTHO05D000003 1.6e-11 73.6 55 58.2
arahy.Tifrunner.gnm1.ann1.57MQ1T Arachis hypogaea HOM05D000001 ORTHO05D000003 2.1e-11 73.2 56 60.7
HPP92_006194 Vanilla planifolia HOM05D000001 ORTHO05D000003 2.1e-11 73.2 53 62.3
VMungo0331G1884 Vigna mungo HOM05D000001 ORTHO05D000003 3.5e-11 72.4 59 55.9
Potri.007G021700 Populus trichocarpa HOM05D000001 ORTHO05D000003 4.6e-11 72.0 104 40.4
EL10Ac9g21485 Beta vulgaris HOM05D000001 ORTHO05D000003 7.8e-11 71.2 56 53.6
PSO063G6068 Papaver somniferum HOM05D000001 ORTHO05D000003 7.8e-11 71.2 72 48.6
Psat7g252960 Pisum sativum HOM05D000001 ORTHO05D000003 7.8e-11 71.2 56 60.7
Ca_20397_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 1.3e-10 70.5 56 60.7
arahy.Tifrunner.gnm1.ann1.ZJ2Y1P Arachis hypogaea HOM05D000001 ORTHO05D000003 1.7e-10 70.1 56 57.1
CAN.G149.21 Capsicum annuum HOM05D000001 ORTHO05D000003 1.7e-10 70.1 65 47.7
PGR119G0230 Punica granatum HOM05D000001 ORTHO05D000003 1.7e-10 70.1 105 41.0
Aqoxy6G01162 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 2.3e-10 69.7 55 54.5
Eucgr.A02405 Eucalyptus grandis HOM05D000001 ORTHO05D000003 2.3e-10 69.7 60 50.0
Nn7g38027 Nelumbo nucifera HOM05D000001 ORTHO05D000003 3.0e-10 69.3 104 41.3
Phvul.006G162500 Phaseolus vulgaris HOM05D000001 ORTHO05D000003 3.0e-10 69.3 56 55.4
RcHm_v2.0_Chr3g0479601 Rosa chinensis HOM05D011771 ORTHO05D012013 3.0e-10 69.3 77 46.8
PSO832G1561 Papaver somniferum HOM05D000001 ORTHO05D000003 3.9e-10 68.9 57 49.1
Psat7g031160 Pisum sativum HOM05D000001 ORTHO05D023426 3.9e-10 68.9 56 57.1
DCAR_019056 Daucus carota HOM05D000001 ORTHO05D000003 5.1e-10 68.6 55 56.4
Psat7g031200 Pisum sativum HOM05D000001 ORTHO05D023426 6.6e-10 68.2 56 55.4
TAR381G0071 Trochodendron aralioides HOM05D000001 ORTHO05D000003 6.6e-10 68.2 73 41.1
TPR.G24194 Trifolium pratense HOM05D000001 ORTHO05D022897 8.6e-10 67.8 56 57.1
TPR.G29127 Trifolium pratense HOM05D000001 ORTHO05D000003 8.6e-10 67.8 56 57.1
BcaB02g10028 Brassica carinata HOM05D000001 ORTHO05D000003 3.3e-09 65.9 68 45.6
COL.COLO4_22037 Corchorus olitorius HOM05D000001 ORTHO05D000003 3.3e-09 65.9 55 52.7
Medtr4g014050 Medicago truncatula HOM05D000001 ORTHO05D000003 3.3e-09 65.9 56 55.4
FAN15G1754 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.3e-09 65.5 53 54.7
ClCG01G019740 Citrullus lanatus HOM05D000001 ORTHO05D000003 1.6e-08 63.5 64 39.1
Ah.01g009720 Amaranthus hybridus HOM05D000001 ORTHO05D000003 2.1e-08 63.2 96 32.3
CANSAT01G0165 Cannabis sativa HOM05D000001 ORTHO05D000003 2.8e-08 62.8 68 44.1
Peaxi162Scf00149g00011 Petunia axillaris HOM05D000001 ORTHO05D000003 2.8e-08 62.8 55 50.9
A09p09980 Brassica napus HOM05D000001 ORTHO05D000003 3.6e-08 62.4 73 38.4
CARHR156560 Cardamine hirsuta HOM05D000001 ORTHO05D000003 4.7e-08 62.0 68 38.2
THA.LOC104819201 Tarenaya hassleriana HOM05D000001 ORTHO05D000003 8.1e-08 61.2 80 33.8
BraA09t36644Z Brassica rapa HOM05D000001 ORTHO05D000424 1.1e-07 60.8 73 37.0
AUR62013136 Chenopodium quinoa HOM05D000001 ORTHO05D000003 1.1e-07 60.8 63 38.1
Aa31LG1G14980 Aethionema arabicum HOM05D000001 ORTHO05D000003 1.4e-07 60.5 73 37.0
MBI17_g12505_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 1.4e-07 60.5 53 50.9
A07p17500 Brassica napus HOM05D000001 ORTHO05D000003 3.1e-07 59.3 53 50.9
RcHm_v2.0_Chr7g0193871 Rosa chinensis HOM05D000001 ORTHO05D023426 3.1e-07 59.3 55 52.7
ATR0824G028 Amborella trichopoda HOM05D000001 ORTHO05D000003 5.2e-07 58.5 59 44.1
C07p25430 Brassica napus HOM05D000001 ORTHO05D000424 5.2e-07 58.5 53 50.9
BolC7t43066H Brassica oleracea HOM05D000001 ORTHO05D000003 5.2e-07 58.5 53 50.9
TPR.G22350 Trifolium pratense HOM05D000001 ORTHO05D009862 5.2e-07 58.5 65 40.0
Carub.0005s1398 Capsella rubella HOM05D000001 ORTHO05D000003 8.9e-07 57.8 60 38.3
Psat1g155120 Pisum sativum HOM05D000001 ORTHO05D009862 1.2e-06 57.4 60 40.0
C09p11840 Brassica napus HOM05D000001 ORTHO05D000424 2.0e-06 56.6 73 37.0
Sc07g0001490 Simmondsia chinensis HOM05D000001 ORTHO05D009295 2.6e-06 56.2 59 44.1
BcaC04g23128 Brassica carinata HOM05D000001 ORTHO05D000003 3.4e-06 55.8 73 35.6
BolC9t54074H Brassica oleracea HOM05D000001 ORTHO05D000424 3.4e-06 55.8 73 35.6
AL5G27160 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 4.4e-06 55.5 53 41.5
BcaNung05719 Brassica carinata HOM05D000001 ORTHO05D000003 4.4e-06 55.5 73 35.6
Sp2g30270 Schrenkiella parvula HOM05D000001 ORTHO05D000003 5.8e-06 55.1 60 40.0
Sed0002783 Sechium edule HOM05D000001 ORTHO05D000003 5.8e-06 55.1 65 44.6
MELO3C020045.2 Cucumis melo HOM05D000001 ORTHO05D000003 7.6e-06 54.7 65 38.5
Lj6g0009472 Lotus japonicus HOM05D000001 ORTHO05D000003 7.6e-06 54.7 51 49.0
Ciclev10005013m.g Citrus clementina HOM05D000001 ORTHO05D009340 9.9e-06 54.3 43 53.5
Manes.12G142900 Manihot esculenta HOM05D000001 ORTHO05D000003 9.9e-06 54.3 61 44.3
PGR142G3401 Punica granatum HOM05D000001 ORTHO05D009834 9.9e-06 54.3 56 42.9

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (3 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (2 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (4 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (3 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (5 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings