Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 9.8e-181 636.7 332 100.0
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 2.7e-170 602.1 326 96.0
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.9e-169 598.2 332 93.7
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 8.6e-169 597.0 332 93.4
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 8.6e-169 597.0 332 94.3
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.3e-168 594.7 332 93.1
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.1e-167 592.4 326 92.0
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.1e-167 592.4 332 91.3
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 2.8e-167 592.0 335 90.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 3.6e-167 591.7 332 91.6
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 4.7e-167 591.3 329 92.1
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 8.0e-167 590.5 332 91.3
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 4.0e-166 588.2 332 90.7
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 4.0e-166 588.2 325 92.3
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 6.8e-166 587.4 326 92.0
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 6.8e-166 587.4 326 91.1
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.2e-165 586.6 332 90.4
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.5e-165 586.3 330 90.9
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 5.8e-165 584.3 329 90.6
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 4.9e-164 581.3 326 90.8
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.9e-164 581.3 329 90.6
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 8.3e-164 580.5 332 89.8
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 8.3e-164 580.5 329 90.6
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.9e-163 579.3 335 90.1
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.9e-163 579.3 335 90.1
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.4e-163 578.9 332 88.3
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 4.1e-163 578.2 329 89.1
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 4.1e-163 578.2 330 89.1
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.4e-163 577.8 332 88.3
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.2e-162 576.6 326 89.6
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.0e-161 573.5 332 87.0
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.3e-161 573.2 332 87.0
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-161 572.8 332 87.7
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.3e-161 572.4 332 86.7
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 3.9e-161 571.6 332 88.9
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 8.6e-161 570.5 332 86.7
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.1e-160 570.1 359 82.5
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.5e-160 569.7 331 89.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 1.9e-160 569.3 328 86.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.9e-160 569.3 326 88.7
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.5e-160 568.9 332 88.6
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 7.3e-160 567.4 332 88.3
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.3e-160 567.4 326 88.7
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 9.5e-160 567.0 326 89.6
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 9.5e-160 567.0 332 88.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 9.5e-160 567.0 331 88.8
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.1e-159 565.8 326 88.0
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.1e-159 565.8 326 88.0
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.1e-159 565.8 332 85.8
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 2.8e-159 565.5 332 87.3
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 3.6e-159 565.1 327 87.5
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 4.7e-159 564.7 338 87.3
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 4.7e-159 564.7 332 85.8
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.7e-159 564.7 326 87.7
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.2e-159 564.3 332 85.5
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 8.1e-159 563.9 332 85.5
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 1.4e-158 563.1 326 88.7
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.8e-158 562.8 325 86.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.1e-158 562.0 325 86.8
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 3.1e-158 562.0 332 87.7
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 3.1e-158 562.0 332 87.7
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 3.1e-158 562.0 325 86.8
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.0e-158 561.6 331 87.9
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.9e-158 560.5 331 87.9
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 8.9e-158 560.5 325 87.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 1.2e-157 560.1 332 86.1
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.6e-157 558.9 333 85.0
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 2.6e-157 558.9 386 78.0
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 4.4e-157 558.1 326 87.4
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 9.9e-157 557.0 373 80.7
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.3e-156 556.6 326 86.2
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-156 556.2 332 85.2
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.7e-156 555.1 333 84.7
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 6.4e-156 554.3 332 87.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 6.4e-156 554.3 326 86.8
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 86.8
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 86.5
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 86.5
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.9e-155 552.7 326 86.5
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.4e-155 552.4 326 86.2
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 2.4e-155 552.4 324 88.0
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.4e-155 552.4 325 87.1
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.2
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.5
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.5
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.5
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.5
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.6e-154 549.7 455 67.7
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 2.1e-154 549.3 326 85.6
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 5.1e-153 544.7 331 84.0
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 8.6e-153 543.9 332 88.9
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.5e-152 543.1 331 83.7
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 4.0e-150 535.0 314 86.3
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 9.9e-149 530.4 331 84.6
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 9.9e-149 530.4 325 83.4
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 2.2e-148 529.3 326 83.1
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.9e-148 528.9 303 88.4
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-145 520.4 327 83.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 8.6e-145 517.3 300 86.3
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.1e-144 516.9 330 81.8
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.1e-142 510.4 326 80.4
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.0e-142 508.4 377 74.5
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.2e-141 506.9 327 80.4
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.6e-141 505.8 302 85.8
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.3e-137 493.4 330 75.8
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 3.0e-137 492.3 333 76.3
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 1.6e-135 486.5 332 78.3
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.0e-133 479.6 327 74.3
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.4e-133 478.8 326 77.3
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.5e-130 468.8 329 76.0
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.3e-129 466.1 335 75.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.3e-128 462.2 279 83.2
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 7.1e-115 417.9 323 69.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 5.7e-112 408.3 234 88.9
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.1e-110 404.1 330 60.3
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.8e-110 403.3 233 86.7
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 9.0e-110 401.0 330 63.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 5.9e-109 398.3 318 63.2
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 5.7e-104 381.7 318 66.4
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 4.8e-103 378.6 271 73.8
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.3e-97 359.8 332 66.3
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.0e-97 359.4 197 95.4
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.2e-92 343.2 223 78.9
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.4e-91 340.5 239 70.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 7.2e-91 338.2 332 60.5
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 3.0e-89 332.8 220 82.7
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-87 327.0 220 80.9
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.8e-81 307.0 220 78.2
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 9.7e-80 301.2 167 89.8
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.2e-74 284.3 165 88.5
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.6e-74 283.9 333 46.2
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 8.0e-74 281.6 165 85.5
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 4.5e-69 265.8 326 52.5
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 4.7e-66 255.8 267 55.8
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 3.4e-64 249.6 135 91.9
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-58 230.3 135 88.9
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.9e-47 192.6 102 93.1
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.6e-45 187.6 159 65.4
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.6e-42 177.6 150 62.7
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.5e-40 171.0 92 96.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 4.4e-40 169.5 103 85.4
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.0e-36 158.3 89 87.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.7e-36 157.5 189 52.4
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.6e-32 143.7 69 97.1
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.6e-32 143.7 77 93.5
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.7e-31 141.0 91 82.4
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.4e-30 137.1 88 77.3
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.2e-30 136.7 82 82.9
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.9e-27 127.5 74 85.1
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 4.3e-27 126.3 91 72.5
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.8e-25 120.9 67 95.5
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.0e-25 119.8 75 77.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 3.4e-24 116.7 151 46.4
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 4.9e-23 112.8 69 82.6
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.3e-20 104.8 65 84.6
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.7e-10 70.1 85 51.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings