Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 5.1e-182 641.0 329 100.0
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.8e-163 579.3 332 90.4
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 3.1e-163 578.6 330 90.3
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.7e-159 565.5 332 88.3
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 4.7e-159 564.7 332 87.7
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 8.0e-159 563.9 330 87.9
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.4e-158 563.1 326 88.7
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.8e-158 562.8 335 87.2
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.8e-158 562.8 332 87.7
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 3.0e-158 562.0 325 89.5
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 6.8e-158 560.8 330 87.9
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 2.6e-157 558.9 332 87.0
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 4.4e-157 558.1 326 87.7
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 7.5e-157 557.4 331 85.8
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.3e-156 556.6 327 87.2
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 2.2e-156 555.8 329 87.5
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 3.7e-156 555.1 329 86.6
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 6.3e-156 554.3 335 87.2
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 6.3e-156 554.3 335 87.2
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 8.3e-156 553.9 330 87.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.8e-155 552.7 331 85.5
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 5.4e-155 551.2 329 85.7
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.0e-154 549.3 326 87.1
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 2.7e-154 548.9 331 85.2
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 2.7e-154 548.9 327 86.5
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.5e-154 548.5 332 85.2
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 3.5e-154 548.5 331 84.6
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.5e-154 548.1 330 85.5
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 5.9e-154 547.7 331 84.9
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 7.7e-154 547.4 332 84.9
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 2.3e-153 545.8 326 85.3
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.9e-153 545.4 332 85.8
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.9e-153 545.4 331 84.6
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.8e-153 545.0 332 84.6
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 3.8e-153 545.0 331 84.9
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 5.0e-153 544.7 331 83.7
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 3.2e-152 542.0 337 83.7
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.2e-152 541.6 332 84.3
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 4.2e-152 541.6 329 84.5
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 5.5e-152 541.2 332 85.2
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.2e-151 540.0 331 84.0
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.2e-151 540.0 331 84.0
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.6e-151 539.7 324 85.5
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.6e-151 539.7 327 85.0
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.1e-151 537.7 327 85.0
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.0e-150 537.0 332 81.9
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.4e-150 536.6 332 82.2
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 4.0e-150 535.0 386 75.4
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 5.2e-150 534.6 332 82.2
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 6.8e-150 534.3 332 81.3
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.2e-149 533.5 373 78.3
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 2.0e-149 532.7 330 84.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.0e-149 532.7 332 81.6
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 2.0e-149 532.7 332 81.0
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.6e-149 532.3 332 81.9
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 2.6e-149 532.3 332 81.0
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.4e-149 531.9 332 81.9
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 5.7e-149 531.2 329 82.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 5.7e-149 531.2 333 81.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 9.8e-149 530.4 327 82.0
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.8e-149 530.4 330 82.4
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.8e-149 530.4 330 82.4
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.3e-148 530.0 332 82.2
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.7e-148 529.6 328 82.6
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.2e-148 529.3 329 82.1
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.2e-148 529.3 330 82.1
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 2.8e-148 528.9 331 83.4
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.9e-148 528.1 325 82.5
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 6.3e-148 527.7 329 82.1
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 8.3e-148 527.3 331 81.6
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.8e-147 526.2 331 81.3
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.8e-147 526.2 326 82.5
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.8e-147 526.2 329 81.8
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.1e-147 525.4 333 80.5
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.2
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 5.4e-147 524.6 329 81.5
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 5.4e-147 524.6 325 82.5
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 9.2e-147 523.9 325 82.5
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.2e-146 523.5 359 76.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 2.7e-146 522.3 330 81.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.3e-145 519.2 331 80.7
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.8e-145 518.5 326 81.9
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.0e-145 518.1 331 80.4
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 6.6e-145 517.7 331 80.4
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.1e-144 516.9 331 80.1
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 7.3e-144 514.2 327 80.7
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.8e-143 512.3 455 63.7
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.8e-143 512.3 325 81.5
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 5.2e-142 508.1 329 79.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 5.2e-142 508.1 314 82.5
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.2e-139 497.3 304 84.2
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.3e-137 493.4 324 78.1
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.3e-137 493.4 329 77.8
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.7e-137 493.0 330 78.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 5.0e-137 491.5 290 84.8
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.3e-136 488.4 332 79.5
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.1e-135 486.1 328 76.8
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.8e-134 483.0 331 77.0
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 3.4e-133 478.8 331 76.7
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 6.0e-130 468.0 330 72.7
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.9e-129 465.3 377 67.9
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 3.9e-129 465.3 329 71.4
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.6e-128 461.5 302 80.1
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.8e-126 456.4 326 75.2
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.6e-125 452.6 325 71.1
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 7.8e-122 441.0 331 71.6
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 2.3e-121 439.5 279 80.6
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 8.1e-119 431.0 334 71.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.4e-109 399.1 234 87.2
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 8.4e-108 394.4 322 67.4
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.6e-106 390.2 330 62.1
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 5.1e-105 385.2 324 58.6
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 3.3e-104 382.5 316 62.3
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.6e-103 379.0 233 82.4
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 7.1e-99 364.8 321 62.9
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 3.3e-96 355.9 275 68.7
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 6.0e-90 335.1 197 87.8
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.8e-87 326.2 229 74.7
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.6e-85 319.7 238 67.6
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.0e-84 317.8 331 58.6
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 3.2e-83 312.8 335 56.4
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 7.9e-82 308.1 220 75.9
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-80 304.3 220 75.0
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-77 293.9 220 74.1
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 5.0e-76 288.9 167 87.4
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 3.6e-74 282.7 333 45.6
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 5.9e-69 265.4 165 83.6
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.0e-65 253.1 165 77.6
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 5.3e-62 242.3 329 48.6
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.5e-61 240.7 267 53.9
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 4.7e-58 229.2 135 85.9
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 3.8e-52 209.5 130 83.1
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 8.0e-42 175.3 147 60.5
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 3.4e-40 169.9 162 59.3
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.4e-40 169.9 103 80.6
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 9.1e-38 161.8 103 81.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.3e-36 157.9 181 53.0
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 2.5e-35 153.7 87 85.1
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 5.2e-33 146.0 92 83.7
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.0e-29 134.0 90 78.9
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.0e-29 134.0 69 89.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.3e-28 130.6 88 73.9
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 6.6e-28 129.0 80 80.0
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.6e-26 124.4 77 84.4
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 2.1e-26 124.0 74 82.4
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 4.7e-26 122.9 72 81.9
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-23 114.4 75 73.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 3.2e-22 110.2 72 79.2
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.6e-21 107.8 69 78.3
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 2.1e-18 97.4 67 79.1
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-15 87.8 65 73.8
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.1e-09 68.6 85 50.6
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 9.9e-08 62.0 46 63.0
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 2.2e-07 60.8 33 84.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings