Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 1.1e-262 909.4 448 100.0
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 1.1e-224 783.1 447 87.0
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 5.9e-213 744.2 484 78.9
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 5.5e-203 711.1 459 76.5
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 2.3e-201 705.7 446 77.4
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 4.1e-198 694.9 436 78.4
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 1.2e-194 683.3 471 74.3
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 8.2e-191 670.6 403 80.9
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 7.5e-184 647.5 516 65.7
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 9.8e-184 647.1 491 67.6
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 7.5e-176 620.9 410 74.4
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 1.3e-175 620.2 392 75.5
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 3.1e-174 615.5 397 73.0
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 3.5e-173 612.1 398 72.6
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 4.5e-173 611.7 393 74.0
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 2.3e-172 609.4 413 70.9
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 5.0e-172 608.2 411 71.0
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 1.1e-171 607.1 391 73.1
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 4.3e-171 605.1 392 74.2
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 2.3e-169 599.4 422 69.2
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 2.3e-169 599.4 391 72.6
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 6.8e-169 597.8 393 71.8
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 8.9e-169 597.4 402 69.4
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 8.9e-169 597.4 413 70.0
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 2.6e-168 595.9 401 71.3
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 4.4e-168 595.1 419 67.8
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 4.4e-168 595.1 410 70.2
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 7.5e-168 594.3 392 72.7
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 3.2e-166 589.0 392 71.7
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 9.2e-166 587.4 407 69.8
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 2.0e-165 586.3 391 72.9
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 2.0e-165 586.3 415 69.9
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 1.3e-164 583.6 407 69.8
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 1.7e-164 583.2 411 68.4
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 2.3e-164 582.8 390 70.8
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 1.1e-163 580.5 394 72.1
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 1.5e-163 580.1 454 65.9
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 1.5e-163 580.1 419 66.3
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 1.6e-162 576.6 408 68.1
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 8.0e-162 574.3 403 69.2
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 1.1e-161 573.9 394 69.0
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 1.4e-161 573.5 391 70.6
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 3.1e-161 572.4 408 67.6
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 6.8e-161 571.2 393 69.5
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 6.8e-161 571.2 420 65.5
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 8.9e-161 570.9 392 68.4
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 8.9e-161 570.9 401 68.1
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 1.2e-160 570.5 390 70.3
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 4.4e-160 568.5 401 67.8
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 5.8e-160 568.2 438 64.8
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 9.8e-160 567.4 401 67.6
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 9.8e-160 567.4 392 70.9
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 4.9e-159 565.1 419 65.6
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.1e-158 563.9 404 67.8
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 1.1e-158 563.9 408 67.6
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 4.1e-158 562.0 390 68.5
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.6e-157 560.1 390 68.2
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 3.5e-157 558.9 410 66.6
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 6.0e-157 558.1 415 66.0
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 8.6e-156 554.3 408 64.7
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 1.1e-155 553.9 426 65.3
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 3.3e-155 552.4 392 66.8
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 4.3e-155 552.0 424 63.0
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 2.3e-153 546.2 376 69.1
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 3.1e-153 545.8 396 67.9
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 6.8e-153 544.7 394 68.5
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.0e-152 543.1 428 63.3
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 2.6e-152 542.7 397 66.0
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 4.4e-152 542.0 428 63.8
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 4.4e-152 542.0 414 63.8
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 1.7e-151 540.0 394 67.0
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 2.9e-151 539.3 409 63.6
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 4.9e-151 538.5 422 62.6
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 1.1e-150 537.3 394 67.0
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 2.4e-150 536.2 412 65.0
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 9.2e-150 534.3 394 66.5
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 7.8e-149 531.2 394 66.8
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 7.8e-149 531.2 394 66.8
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 1.7e-148 530.0 443 59.1
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 5.6e-147 525.0 393 65.6
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 5.6e-147 525.0 392 65.6
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 2.8e-146 522.7 431 61.5
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 6.2e-146 521.5 358 70.9
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 8.4e-143 511.1 390 65.9
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 2.5e-139 499.6 394 63.5
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 9.6e-139 497.7 328 70.7
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 5.4e-134 481.9 358 66.8
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 1.5e-128 463.8 330 66.4
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 7.6e-128 461.5 328 66.8
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 3.8e-127 459.1 329 63.8
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 6.4e-127 458.4 303 71.6
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 6.0e-125 451.8 398 55.5
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 3.9e-124 449.1 328 66.2
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 2.5e-123 446.4 392 57.4
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 2.2e-119 433.3 387 54.5
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 2.7e-117 426.4 341 63.6
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 7.9e-117 424.9 446 54.3
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 3.7e-114 416.0 279 69.5
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.9e-110 403.7 418 50.7
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 7.9e-109 398.3 323 61.9
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 2.8e-106 389.8 381 52.0
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 5.3e-105 385.6 305 63.3
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 3.8e-103 379.4 283 65.0
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 7.9e-101 371.7 283 64.3
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 7.9e-101 371.7 283 64.3
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 2.2e-98 363.6 213 80.3
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 2.6e-91 340.1 241 67.2
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 5.5e-86 322.4 251 63.7
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 6.1e-85 318.9 237 66.7
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.8e-84 317.4 439 42.6
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 1.1e-73 281.6 347 45.8
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.0e-72 277.3 188 70.2
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 1.7e-66 257.7 148 86.5
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 1.5e-59 234.6 179 66.5
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 3.3e-54 216.9 395 36.7
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 1.8e-52 211.1 169 61.5
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 4.9e-50 203.0 159 63.5
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 8.3e-50 202.2 145 65.5
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 3.2e-49 200.3 243 45.3
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 7.0e-49 199.1 166 59.0
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 3.3e-38 163.7 154 55.8
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 5.6e-38 162.9 428 29.2
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 7.3e-38 162.5 435 30.3
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 4.4e-35 153.3 443 28.9
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 1.6e-32 144.8 442 26.9
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 2.1e-32 144.4 415 28.0
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 3.8e-26 123.6 78 69.2
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 4.9e-26 123.2 87 65.5
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 1.9e-25 121.3 80 70.0
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 1.7e-23 114.8 235 35.7
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 1.1e-22 112.1 107 49.5
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 1.3e-21 108.6 396 27.3
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 1.1e-20 105.5 64 81.2
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.4e-20 104.4 82 67.1
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 1.0e-15 89.0 66 68.2
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 9.6e-14 82.4 79 54.4
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 1.3e-13 82.0 72 56.9
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 1.8e-07 61.6 37 75.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (6 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (4 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (3 genes)

Program Settings