Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 3.2e-187 658.3 335 100.0
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 3.5e-186 654.8 335 99.4
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.0e-161 573.5 329 88.1
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 6.7e-161 570.9 332 87.3
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.7e-161 570.9 329 87.5
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 1.4e-155 553.1 329 84.2
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 3.2e-155 552.0 331 84.0
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 4.2e-155 551.6 329 84.2
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 4.2e-155 551.6 333 82.9
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.2e-154 550.1 329 83.3
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.6e-154 549.7 331 83.7
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 2.1e-154 549.3 330 82.7
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 2.7e-154 548.9 331 83.7
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 2.7e-154 548.9 331 83.7
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 6.0e-154 547.7 330 82.7
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 1.3e-153 546.6 329 83.9
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.8e-153 546.2 331 83.7
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.3e-153 545.8 331 82.5
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 3.0e-153 545.4 331 82.8
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 3.9e-153 545.0 331 82.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 5.1e-153 544.7 331 81.3
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 6.7e-153 544.3 330 82.4
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 1.5e-152 543.1 330 82.7
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 3.3e-152 542.0 328 82.9
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 5.6e-152 541.2 327 83.2
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 5.6e-152 541.2 328 82.9
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.6e-151 539.7 329 82.4
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.6e-151 539.7 329 82.4
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.6e-151 539.7 331 81.6
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.1e-151 539.3 331 82.2
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.1e-151 539.3 331 81.3
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 2.8e-151 538.9 330 81.2
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.7e-151 538.5 329 82.1
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 4.8e-151 538.1 330 80.9
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 4.8e-151 538.1 331 81.9
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 4.8e-151 538.1 358 77.4
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 8.1e-151 537.3 327 83.2
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 8.1e-151 537.3 327 83.2
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 8.1e-151 537.3 331 80.4
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.1e-150 537.0 331 81.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.1e-150 537.0 329 82.4
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 1.4e-150 536.6 330 80.3
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.4e-150 536.6 331 81.9
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 1.8e-150 536.2 331 81.0
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 2.4e-150 535.8 331 80.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 4.0e-150 535.0 328 81.7
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.0e-150 535.0 331 81.6
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 4.0e-150 535.0 330 80.3
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.3e-150 534.6 331 81.9
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 6.9e-150 534.3 329 80.9
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 9.0e-150 533.9 330 80.6
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-149 533.5 331 82.8
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.2e-149 533.5 327 81.3
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.2e-149 533.5 331 80.4
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.2e-149 533.5 331 81.6
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.0e-149 532.7 331 81.0
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 2.6e-149 532.3 331 80.7
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 5.8e-149 531.2 330 79.7
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 5.8e-149 531.2 331 80.4
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 7.6e-149 530.8 331 80.7
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 7.6e-149 530.8 329 81.2
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.3e-148 530.0 329 80.2
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 1.7e-148 529.6 331 80.7
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 2.9e-148 528.9 333 79.9
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 3.8e-148 528.5 331 80.4
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 3.8e-148 528.5 331 80.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.8e-148 528.5 306 86.9
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 4.9e-148 528.1 330 79.7
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 3.2e-147 525.4 331 78.9
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 4.2e-147 525.0 337 79.2
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 4.2e-147 525.0 334 78.1
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 4.2e-147 525.0 331 79.2
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.6e-146 523.1 331 78.2
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 7.9e-146 520.8 327 79.8
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.0e-145 520.4 384 71.9
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.8e-145 519.6 331 80.4
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.1e-144 516.9 328 80.8
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.1e-144 516.9 331 79.2
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 4.3e-144 515.0 365 74.2
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 4.3e-144 515.0 331 77.6
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 5.7e-144 514.6 331 77.6
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.4e-144 514.2 331 78.9
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 9.6e-144 513.8 329 80.9
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.3e-143 513.5 331 77.3
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 4.8e-143 511.5 331 77.0
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 6.3e-143 511.1 331 76.7
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 6.3e-143 511.1 331 76.7
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 6.3e-143 511.1 331 76.7
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 6.3e-143 511.1 331 76.7
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 2.4e-142 509.2 331 76.4
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 4.1e-142 508.4 331 76.4
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 4.1e-142 508.4 331 76.7
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.9e-142 507.7 331 77.6
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 3.4e-141 505.4 455 61.5
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 7.2e-139 497.7 329 75.1
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 2.1e-138 496.1 331 74.9
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 6.1e-138 494.6 327 75.8
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.8e-137 493.0 333 74.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.3e-137 492.7 316 78.2
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 3.3e-136 488.8 287 83.6
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 9.7e-136 487.3 331 76.4
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.2e-135 486.1 333 74.8
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 3.7e-135 485.3 331 77.3
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.1e-134 483.8 328 73.8
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 2.4e-134 482.6 332 74.4
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 2.6e-133 479.2 281 85.4
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.1e-128 463.8 328 73.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.4e-128 461.1 377 66.6
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.8e-127 459.1 331 72.2
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.8e-127 458.4 301 78.1
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.8e-124 448.7 331 71.3
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 4.8e-119 431.8 334 68.9
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.2e-114 417.2 324 62.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 4.7e-114 415.2 320 64.4
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 6.1e-114 414.8 330 63.9
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 8.0e-114 414.5 325 68.3
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.6e-106 389.0 234 81.6
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.8e-103 379.4 233 80.7
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 2.0e-93 346.7 323 57.9
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.7e-93 346.3 237 72.6
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 6.6e-92 341.7 273 64.8
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.6e-90 337.0 200 85.5
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 5.2e-89 332.0 336 58.6
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 5.4e-86 322.0 226 73.0
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.3e-84 316.6 220 76.4
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-82 310.8 220 75.0
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 9.8e-80 301.2 167 88.0
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.7e-79 300.4 337 52.8
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 2.0e-77 293.5 220 72.7
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 3.5e-77 292.7 333 46.5
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 6.8e-65 251.9 267 54.7
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 7.6e-64 248.4 163 76.1
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.9e-63 246.5 164 76.2
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 2.1e-58 230.3 331 44.1
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.9e-55 219.9 135 80.0
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 3.1e-49 199.9 132 75.8
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.0e-41 171.8 103 80.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.9e-38 164.1 186 52.2
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 5.5e-38 162.5 152 58.6
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 5.6e-35 152.5 164 51.2
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 1.6e-34 151.0 103 73.8
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 3.1e-33 146.7 91 81.3
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 4.5e-32 142.9 89 77.5
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.9e-31 140.2 88 76.1
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.3e-28 130.6 90 76.7
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 1.5e-27 127.9 69 85.5
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.5e-27 127.9 74 82.4
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 9.7e-27 125.2 79 81.0
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 8.2e-26 122.1 82 72.0
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 1.0e-23 115.2 84 69.0
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.9e-22 110.9 75 70.7
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.8e-20 104.4 72 70.8
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 3.9e-20 103.2 63 79.4
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 4.8e-18 96.3 66 74.2
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-14 85.1 65 69.2
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 1.2e-08 65.1 46 67.4
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 4.5e-08 63.2 33 87.9
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.3e-07 61.6 85 45.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings