Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014712 Solanum tuberosum HOM05D004368 ORTHO05D004990 1.0e-34 149.4 73 100.0
Sopen06g002970 Solanum pennellii HOM05D004368 ORTHO05D004990 9.1e-31 136.3 68 98.5
CAN.G941.28 Capsicum annuum HOM05D004368 ORTHO05D004990 1.6e-30 135.6 68 98.5
Solyc06g008160.4 Solanum lycopersicum HOM05D004368 ORTHO05D004990 4.5e-30 134.0 68 97.1
Nitab4.5_0006980g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 1.7e-29 132.1 68 92.6
Peaxi162Scf00043g02929 Petunia axillaris HOM05D004368 ORTHO05D004990 4.2e-28 127.5 68 88.2
Nitab4.5_0000845g0110 Nicotiana tabacum HOM05D004368 ORTHO05D004990 4.7e-27 124.0 68 83.8
Nitab4.5_0003342g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 4.7e-27 124.0 68 83.8
Cc06_g01580 Coffea canephora HOM05D004368 ORTHO05D004990 6.1e-27 123.6 68 86.8
SalBow5G3644 Salvia bowleyana HOM05D004368 ORTHO05D004990 6.1e-27 123.6 68 85.3
CAN.G1487.1 Capsicum annuum HOM05D004368 ORTHO05D004990 8.0e-27 123.2 68 83.8
BcaC05g29122 Brassica carinata HOM05D004368 ORTHO05D004990 1.8e-26 122.1 68 86.8
C05p53530 Brassica napus HOM05D004368 ORTHO05D004990 1.8e-26 122.1 68 86.8
BolC5t34030H Brassica oleracea HOM05D004368 ORTHO05D004990 1.8e-26 122.1 68 86.8
Thecc.06G124200 Theobroma cacao HOM05D004368 ORTHO05D004990 1.8e-26 122.1 68 85.3
Actinidia32205 Actinidia chinensis HOM05D004368 ORTHO05D004990 2.3e-26 121.7 68 85.3
SalBow5G0362 Salvia bowleyana HOM05D004368 ORTHO05D004990 3.0e-26 121.3 68 83.8
TWI14G0995 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 3.0e-26 121.3 68 83.8
Haze_16075 Corylus avellana HOM05D004368 ORTHO05D004990 4.0e-26 120.9 68 83.8
Actinidia21803 Actinidia chinensis HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 85.3
Duzib160G0466 Durio zibethinus HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 83.8
Duzib235G0527 Durio zibethinus HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 83.8
Manes.11G016500 Manihot esculenta HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 85.3
Sabra01G0127300 Salix brachista HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 86.8
Solyc09g072880.3 Solanum lycopersicum HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 80.9
Sopen09g028680 Solanum pennellii HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 80.9
Sopen09g028700 Solanum pennellii HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 80.9
PGSC0003DMG400003792 Solanum tuberosum HOM05D004368 ORTHO05D004990 5.2e-26 120.6 68 80.9
ATR0568G120 Amborella trichopoda HOM05D004368 ORTHO05D004990 6.8e-26 120.2 68 85.3
A05p35340 Brassica napus HOM05D004368 ORTHO05D004990 6.8e-26 120.2 68 83.8
BraA05t22344Z Brassica rapa HOM05D004368 ORTHO05D004990 6.8e-26 120.2 68 83.8
TWI23G0003 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 6.8e-26 120.2 68 83.8
Cpa.g.sc25.148 Carica papaya HOM05D004368 ORTHO05D004990 8.8e-26 119.8 68 82.4
CiPaw.01G216100 Carya illinoinensis HOM05D004368 ORTHO05D004990 8.8e-26 119.8 68 83.8
Lj9C535T4 Lonicera japonica HOM05D004368 ORTHO05D004990 8.8e-26 119.8 68 83.8
Peaxi162Scf01157g00111 Petunia axillaris HOM05D004368 ORTHO05D004990 8.8e-26 119.8 62 90.3
Sc15g0000580 Simmondsia chinensis HOM05D004368 ORTHO05D004990 8.8e-26 119.8 68 83.8
CSS0030612 Camellia sinensis var. sinensis HOM05D004368 ORTHO05D004990 1.2e-25 119.4 68 82.4
GSVIVG01016719001 Vitis vinifera HOM05D004368 ORTHO05D004990 1.2e-25 119.4 68 83.8
BcaC01g03958 Brassica carinata HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 83.8
A03p38620 Brassica napus HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 83.8
C03p46730 Brassica napus HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 83.8
BolC3t16938H Brassica oleracea HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 83.8
BraA03t13009Z Brassica rapa HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 83.8
Thhalv10021156m.g Eutrema salsugineum HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 83.8
Potri.001G166000 Populus trichocarpa HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 83.8
Sp3g12370 Schrenkiella parvula HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 83.8
TAR626G1097 Trochodendron aralioides HOM05D004368 ORTHO05D004990 1.5e-25 119.0 68 85.3
Ciclev10026090m.g Citrus clementina HOM05D004368 ORTHO05D004990 2.0e-25 118.6 68 82.4
COL.COLO4_30792 Corchorus olitorius HOM05D004368 ORTHO05D004990 2.0e-25 118.6 68 83.8
unitig_27.g24839 Utricularia gibba HOM05D004368 ORTHO05D004990 2.0e-25 118.6 67 82.1
unitig_699.g19383 Utricularia gibba HOM05D004368 ORTHO05D004990 2.0e-25 118.6 67 83.6
CANSAT56G3889 Cannabis sativa HOM05D004368 ORTHO05D004990 2.6e-25 118.2 68 83.8
DCAR_022662 Daucus carota HOM05D004368 ORTHO05D004990 2.6e-25 118.2 68 85.3
Eucgr.F02457 Eucalyptus grandis HOM05D004368 ORTHO05D004990 2.6e-25 118.2 68 82.4
Medtr8g022040 Medicago truncatula HOM05D004368 ORTHO05D004990 2.6e-25 118.2 68 80.9
Nitab4.5_0000326g0270 Nicotiana tabacum HOM05D004368 ORTHO05D004990 2.6e-25 118.2 62 90.3
Psat4g167320 Pisum sativum HOM05D004368 ORTHO05D004990 2.6e-25 118.2 68 80.9
TPR.G29997 Trifolium pratense HOM05D004368 ORTHO05D004990 2.6e-25 118.2 68 80.9
Carub.0003s1372 Capsella rubella HOM05D004368 ORTHO05D004990 3.4e-25 117.9 68 82.4
CARHR088970 Cardamine hirsuta HOM05D004368 ORTHO05D004990 3.4e-25 117.9 68 82.4
FvH4_6g35160 Fragaria vesca HOM05D004368 ORTHO05D004990 3.4e-25 117.9 68 82.4
FAN09G0342 Fragaria x ananassa HOM05D004368 ORTHO05D004990 3.4e-25 117.9 68 82.4
FAN14G3095 Fragaria x ananassa HOM05D004368 ORTHO05D004990 3.4e-25 117.9 68 82.4
MBI02_g13231_MAGBIO Magnolia biondii HOM05D004368 ORTHO05D004990 3.4e-25 117.9 68 79.4
QL05p003761 Quercus lobata HOM05D004368 ORTHO05D004990 3.4e-25 117.9 67 82.1
HPP92_003012 Vanilla planifolia HOM05D004368 ORTHO05D004990 3.4e-25 117.9 68 83.8
BcaB04g18818 Brassica carinata HOM05D004368 ORTHO05D004990 4.4e-25 117.5 68 82.4
Lsat_1_v5_gn_4_91400 Lactuca sativa HOM05D004368 ORTHO05D004990 4.4e-25 117.5 68 80.9
MD17G1148400 Malus domestica HOM05D004368 ORTHO05D004990 4.4e-25 117.5 68 80.9
Oeu064511.1 Olea europaea HOM05D004368 ORTHO05D004990 4.4e-25 117.5 63 87.3
unitig_27.g24862 Utricularia gibba HOM05D004368 ORTHO05D004990 4.4e-25 117.5 67 80.6
MELO3C022680.2 Cucumis melo HOM05D004368 ORTHO05D004990 5.7e-25 117.1 68 82.4
CsaV3_3G030850 Cucumis sativus L. HOM05D000945 ORTHO05D000919 5.7e-25 117.1 68 82.4
Gohir.A05G138800 Gossypium hirsutum HOM05D004368 ORTHO05D004990 5.7e-25 117.1 68 82.4
ClCG07G014470 Citrullus lanatus HOM05D004368 ORTHO05D004990 7.5e-25 116.7 68 82.4
ECA248G3608 Erigeron canadensis HOM05D004368 ORTHO05D004990 7.5e-25 116.7 68 80.9
Hund18675 Selenicereus undatus HOM05D004368 ORTHO05D004990 7.5e-25 116.7 68 82.4
Aqoxy7G01007 Aquilegia oxysepala HOM05D004368 ORTHO05D004990 9.8e-25 116.3 68 82.4
AT3G14110 Arabidopsis thaliana HOM05D004368 ORTHO05D004990 9.8e-25 116.3 68 82.4
Ca_23409_v3 Cicer arietinum L. HOM05D004368 ORTHO05D004990 9.8e-25 116.3 68 80.9
PGR119G1615 Punica granatum HOM05D004368 ORTHO05D004990 9.8e-25 116.3 68 80.9
RcHm_v2.0_Chr2g0146421 Rosa chinensis HOM05D004368 ORTHO05D004990 9.8e-25 116.3 68 80.9
Atru.chr1.4073 Acer truncatum HOM05D004368 ORTHO05D004990 1.3e-24 115.9 68 82.4
Aa31LG8G1340 Aethionema arabicum HOM05D004368 ORTHO05D004990 1.3e-24 115.9 68 80.9
DCAR_016106 Daucus carota HOM05D004368 ORTHO05D004990 1.3e-24 115.9 68 83.8
Hma1.2p1_0414F.1_g147650 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 1.3e-24 115.9 68 82.4
Nn6g35672 Nelumbo nucifera HOM05D004368 ORTHO05D004990 1.3e-24 115.9 68 79.4
Gohir.D05G141000 Gossypium hirsutum HOM05D004368 ORTHO05D004990 1.7e-24 115.5 68 80.9
Gorai.009G145200 Gossypium raimondii HOM05D004368 ORTHO05D004990 1.7e-24 115.5 68 80.9
Nn8g38578 Nelumbo nucifera HOM05D004368 ORTHO05D004990 1.7e-24 115.5 68 80.9
AL3G26340 Arabidopsis lyrata HOM05D004368 ORTHO05D004990 2.2e-24 115.2 68 80.9
arahy.Tifrunner.gnm1.ann1.26KYL2 Arachis hypogaea HOM05D004368 ORTHO05D004990 2.2e-24 115.2 68 77.9
arahy.Tifrunner.gnm1.ann1.AFL61P Arachis hypogaea HOM05D004368 ORTHO05D004990 2.2e-24 115.2 68 77.9
Glyma.07G041700 Glycine max HOM05D004368 ORTHO05D004990 2.2e-24 115.2 68 79.4
Sed0018133 Sechium edule HOM05D004368 ORTHO05D004990 2.2e-24 115.2 68 80.9
FAN02G3674 Fragaria x ananassa HOM05D004368 ORTHO05D004990 2.8e-24 114.8 68 79.4
FAN05G4100 Fragaria x ananassa HOM05D004368 ORTHO05D004990 2.8e-24 114.8 68 79.4
Glyma.16G010200 Glycine max HOM05D004368 ORTHO05D004990 2.8e-24 114.8 68 79.4
HanXRQChr09g0277121 Helianthus annuus HOM05D004368 ORTHO05D004990 2.8e-24 114.8 68 77.9
Lj5A32G57 Lonicera japonica HOM05D004368 ORTHO05D004990 2.8e-24 114.8 68 79.4
CDE05G2024 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 3.7e-24 114.4 68 77.9
Migut.L01998 Erythranthe guttata HOM05D004368 ORTHO05D004990 3.7e-24 114.4 68 77.9
THA.LOC104822665 Tarenaya hassleriana HOM05D004368 ORTHO05D004990 3.7e-24 114.4 68 80.9
HanXRQChr15g0497161 Helianthus annuus HOM05D004368 ORTHO05D004990 4.9e-24 114.0 68 77.9
MD09G1178400 Malus domestica HOM05D004368 ORTHO05D004990 4.9e-24 114.0 68 79.4
VMungo0540G1553 Vigna mungo HOM05D004368 ORTHO05D004990 4.9e-24 114.0 68 77.9
Gohir.A06G193900 Gossypium hirsutum HOM05D004368 ORTHO05D004990 6.3e-24 113.6 68 79.4
Gorai.010G235500 Gossypium raimondii HOM05D004368 ORTHO05D004990 6.3e-24 113.6 68 79.4
Lj3g0026199 Lotus japonicus HOM05D004368 ORTHO05D004990 6.3e-24 113.6 68 77.9
ECA247G3177 Erigeron canadensis HOM05D004368 ORTHO05D004990 1.1e-23 112.8 68 76.5
Hma1.2p1_0311F.1_g121230 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 1.1e-23 112.8 68 79.4
TAR468G0014 Trochodendron aralioides HOM05D004368 ORTHO05D004990 1.4e-23 112.5 68 79.4
Os01g0510600 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 1.8e-23 112.1 68 77.9
Phvul.006G206500 Phaseolus vulgaris HOM05D004368 ORTHO05D004990 1.8e-23 112.1 68 77.9
AUR62001444 Chenopodium quinoa HOM05D004368 ORTHO05D004990 2.4e-23 111.7 65 81.5
Gohir.D08G096333 Gossypium hirsutum HOM05D004368 ORTHO05D004990 2.4e-23 111.7 68 79.4
Gorai.004G102400 Gossypium raimondii HOM05D004368 ORTHO05D004990 2.4e-23 111.7 68 79.4
Gohir.D06G201700 Gossypium hirsutum HOM05D004368 ORTHO05D004990 3.1e-23 111.3 68 77.9
EL10Ac7g16443 Beta vulgaris HOM05D004368 ORTHO05D004990 4.1e-23 110.9 65 80.0
AUR62009921 Chenopodium quinoa HOM05D004368 ORTHO05D004990 5.4e-23 110.5 65 80.0
Lalb_Chr17g0343461 Lupinus albus HOM05D004368 ORTHO05D004990 5.4e-23 110.5 68 76.5
Rhsim08G0241200 Rhododendron simsii HOM05D004368 ORTHO05D004990 5.4e-23 110.5 68 76.5
AagrBONN_evm.TU.Sc2ySwM_228.3011 Anthoceros agrestis HOM05D004368 ORTHO05D004990 1.2e-22 109.4 67 79.1
Ah.15g095150 Amaranthus hybridus HOM05D004368 ORTHO05D004990 1.6e-22 109.0 65 78.5
CDE04G0878 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 2.0e-22 108.6 65 76.9
Zm00001eb308830 Zea mays HOM05D004368 ORTHO05D004990 2.7e-22 108.2 68 75.0
vmacro06407 Vaccinium macrocarpon HOM05D004368 ORTHO05D004990 3.5e-22 107.8 68 75.0
Gohir.D07G090325 Gossypium hirsutum HOM05D004368 ORTHO05D004990 4.5e-22 107.5 67 77.6
PSO386G0078 Papaver somniferum HOM05D004368 ORTHO05D004990 4.5e-22 107.5 65 76.9
PSO724G0024 Papaver somniferum HOM05D004368 ORTHO05D004990 4.5e-22 107.5 65 76.9
Lalb_Chr04g0253731 Lupinus albus HOM05D004368 ORTHO05D004990 7.7e-22 106.7 68 73.5
SMO141G0180 Selaginella moellendorffii HOM05D004368 ORTHO05D004990 9.5e-20 99.8 67 71.6
Mapoly0108s0002 Marchantia polymorpha HOM05D004368 ORTHO05D004990 1.2e-19 99.4 67 70.1
Mapoly0110s0050 Marchantia polymorpha HOM05D004368 ORTHO05D004990 1.2e-19 99.4 67 70.1
Os02g0586800 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 1.6e-19 99.0 65 75.4
Gorai.001G096600 Gossypium raimondii HOM05D004368 ORTHO05D004990 2.1e-19 98.6 68 72.1
Pp3c11_3130 Physcomitrium patens HOM05D004368 ORTHO05D004990 6.8e-18 93.6 67 62.7
CBR_g39266 Chara braunii HOM05D004368 ORTHO05D004990 6.3e-16 87.0 64 62.5
SGA_v2.0_scaffold110G31269 Striga asiatica HOM05D004368 ORTHO05D004990 7.0e-15 83.6 60 70.0
SGA_v2.0_scaffold382G50397 Striga asiatica HOM05D004368 ORTHO05D004990 4.7e-11 70.9 41 75.6
Cre10.g460050 Chlamydomonas reinhardtii HOM05D004368 ORTHO05D004990 6.1e-11 70.5 66 48.5
MCO11G340 Micromonas commoda HOM05D004368 ORTHO05D004990 6.8e-10 67.0 67 46.3
Rhsim03G0211800 Rhododendron simsii HOM05D004368 ORTHO05D004990 1.9e-07 58.9 78 42.3
MCO14G328 Micromonas commoda HOM05D004368 ORTHO05D004990 1.6e-06 55.8 66 42.4
PRCOL_00003238 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 2.7e-06 55.1 63 44.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (0 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (4 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (1 genes)
Micromonas commoda (2 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (3 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (3 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings