Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 7.2e-184 647.1 332 100.0
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.2e-172 609.0 332 93.4
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 5.0e-169 597.8 328 91.8
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 6.6e-169 597.4 327 92.0
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 5.6e-168 594.3 328 92.4
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 5.6e-168 594.3 328 91.2
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 7.3e-168 594.0 332 90.7
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 2.8e-167 592.0 332 91.6
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 4.7e-167 591.3 329 91.5
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 4.7e-167 591.3 329 91.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.8e-166 589.3 325 92.3
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.3e-166 589.0 328 90.9
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 6.8e-166 587.4 327 90.8
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.5e-165 586.3 329 90.0
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 2.6e-165 585.5 332 89.5
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 4.4e-165 584.7 327 90.5
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.4e-165 584.7 329 90.9
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.5e-165 583.9 325 92.6
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.5e-165 583.9 325 92.6
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.5e-165 583.9 329 90.6
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.3e-164 583.2 326 90.8
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.7e-164 582.8 329 90.6
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 3.7e-164 581.6 329 89.1
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 5.4e-163 577.8 329 89.1
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.6e-162 576.2 329 88.4
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.0e-162 575.9 327 89.0
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.0e-162 575.9 327 88.7
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 3.5e-162 575.1 329 88.1
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.5e-162 575.1 327 89.0
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 6.0e-162 574.3 329 88.4
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.0e-161 573.5 329 88.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 1.0e-161 573.5 329 88.1
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.7e-161 572.8 329 88.1
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.3e-161 572.4 329 88.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.0e-161 572.0 328 88.1
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 5.0e-161 571.2 329 87.8
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 6.6e-161 570.9 330 88.2
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.1e-160 570.1 328 87.8
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.5e-160 569.7 329 87.2
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.5e-160 569.7 327 87.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 1.9e-160 569.3 329 88.4
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.5e-160 568.9 327 87.5
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.5e-160 568.9 327 87.5
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 3.3e-160 568.5 328 86.6
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 3.3e-160 568.5 329 85.7
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.6e-160 567.8 327 87.2
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 7.3e-160 567.4 329 87.5
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 7.3e-160 567.4 329 87.5
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 7.3e-160 567.4 327 87.2
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.6e-159 566.2 328 86.6
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.1e-159 565.8 325 88.6
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 8.1e-159 563.9 335 86.3
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.4e-158 563.1 326 88.0
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 1.4e-158 563.1 329 85.7
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 2.3e-158 562.4 326 86.5
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.3e-158 562.4 329 85.7
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 4.0e-158 561.6 329 85.1
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 4.0e-158 561.6 329 85.4
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 4.0e-158 561.6 328 85.7
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.8e-158 560.8 329 86.6
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.2e-157 560.1 328 85.7
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.5e-157 559.7 363 82.4
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.6e-157 558.9 328 84.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.4e-157 558.1 327 85.3
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 4.4e-157 558.1 328 85.1
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 7.5e-157 557.4 329 85.4
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 7.5e-157 557.4 327 85.9
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 9.9e-157 557.0 382 77.2
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 2.9e-156 555.4 325 86.2
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 4.9e-156 554.7 329 84.8
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.4e-155 553.1 329 84.5
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.9e-155 552.7 329 84.2
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.9e-155 552.7 356 79.5
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 3.2e-155 552.0 329 84.8
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 84.2
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 84.2
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 84.2
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 84.2
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 4.1e-155 551.6 327 87.5
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 84.8
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 7.1e-155 550.8 329 84.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 7.1e-155 550.8 333 83.2
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 7.1e-155 550.8 329 85.7
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 2.1e-154 549.3 329 84.2
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.1e-154 549.3 333 82.9
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.7e-154 548.9 329 84.2
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 4.6e-154 548.1 329 83.9
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.7e-153 546.2 453 66.9
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 2.3e-153 545.8 329 83.6
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-151 540.0 329 83.0
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.1e-151 539.3 325 84.3
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.7e-151 538.1 329 82.4
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 5.2e-150 534.6 314 85.4
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.5e-149 533.1 329 82.1
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.0e-149 532.7 304 88.2
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 8.4e-148 527.3 329 82.4
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.4e-147 525.8 332 80.7
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.3e-145 520.0 330 81.2
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 3.9e-145 518.5 329 83.0
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.5e-144 516.5 331 78.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 2.5e-144 515.8 300 86.3
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 4.0e-142 508.4 328 79.6
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 2.0e-141 506.1 331 76.1
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 5.4e-139 498.0 329 80.2
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 9.3e-139 497.3 333 75.1
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-135 486.9 375 70.1
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.1e-135 486.1 296 84.8
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.4e-134 482.6 329 73.3
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.7e-132 476.5 326 77.0
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.3e-129 466.8 329 75.1
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 1.5e-128 463.4 279 83.2
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 1.9e-128 463.0 332 74.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.8e-118 429.9 323 70.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.3e-116 423.7 234 91.5
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 3.7e-111 405.6 324 60.5
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 8.2e-111 404.4 318 63.2
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.0e-109 399.8 233 86.7
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 3.2e-107 392.5 330 62.1
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.8e-102 376.7 274 72.3
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 2.0e-101 373.2 321 63.6
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.7e-95 353.6 329 62.6
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 4.8e-95 352.1 197 91.4
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 3.2e-91 339.3 235 71.9
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 5.5e-91 338.6 335 59.4
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 3.6e-90 335.9 220 81.4
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 2.0e-88 330.1 220 79.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.6e-88 329.7 224 75.4
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 6.5e-84 315.1 220 77.7
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.1e-83 314.3 167 94.0
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 2.0e-77 293.5 333 46.5
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.4e-70 270.8 162 84.6
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 3.5e-69 266.2 329 51.4
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 6.5e-68 261.9 161 80.1
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.2e-66 257.7 267 56.2
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 5.4e-62 242.3 133 89.5
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.6e-56 223.4 130 86.2
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 2.5e-43 180.3 162 61.1
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.3e-43 179.5 101 85.1
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 6.2e-42 175.6 150 61.3
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 3.7e-39 166.4 181 55.8
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 3.5e-37 159.8 103 78.6
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.0e-36 158.3 89 88.8
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 6.6e-36 155.6 87 85.1
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 5.8e-32 142.5 88 79.5
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.6e-32 142.1 77 93.5
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 3.2e-30 136.7 69 91.3
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-29 134.8 88 79.5
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-29 134.8 80 81.2
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 4.6e-29 132.9 74 87.8
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 6.6e-28 129.0 91 72.5
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.5e-24 117.9 75 76.0
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 3.8e-23 113.2 151 45.0
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 6.4e-23 112.5 69 81.2
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-21 108.2 64 84.4
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-17 95.1 63 77.8
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 2.1e-10 70.9 85 50.6
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 7.6e-08 62.4 33 87.9


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