Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 4.0e-133 479.6 672 100.0
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 4.4e-63 246.9 176 77.3
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 9.0e-24 116.3 151 41.7
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.5e-23 114.0 152 40.8
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.6e-23 113.2 152 40.8
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 2.2e-22 111.7 167 41.9
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 6.4e-22 110.2 141 42.6
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 5.5e-21 107.1 102 52.0
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 5.5e-21 107.1 102 52.0
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 9.3e-21 106.3 145 41.4
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 2.1e-20 105.1 167 34.1
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 3.5e-20 104.4 148 41.2
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 4.6e-20 104.0 156 37.2
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 6.0e-20 103.6 141 41.1
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 6.0e-20 103.6 144 42.4
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 7.9e-20 103.2 144 42.4
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 1.0e-19 102.8 153 37.9
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 1.3e-19 102.4 153 37.3
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 2.3e-19 101.7 153 37.9
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.3e-19 101.7 131 41.2
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 8.7e-19 99.8 149 38.9
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 8.7e-19 99.8 167 35.9
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 1.1e-18 99.4 159 39.6
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.5e-18 99.0 131 38.9
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.9e-18 98.6 94 48.9
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 4.8e-17 94.0 159 37.7
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 6.2e-17 93.6 166 34.3
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 2.4e-16 91.7 159 36.5
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 9.0e-16 89.7 133 37.6
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 1.5e-15 89.0 97 46.4
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 2.0e-15 88.6 102 40.2
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.0e-15 88.6 99 40.4
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 2.0e-15 88.6 99 45.5
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 2.6e-15 88.2 161 36.0
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 1.3e-14 85.9 92 42.4
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 3.8e-14 84.3 95 44.2
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 3.8e-14 84.3 104 41.3
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 3.8e-14 84.3 93 40.9
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 4.9e-14 84.0 96 44.8
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.9e-14 84.0 127 39.4
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 4.9e-14 84.0 94 43.6
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 6.5e-14 83.6 93 40.9
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 6.5e-14 83.6 97 45.4
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 1.1e-13 82.8 156 34.6
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 1.9e-13 82.0 93 40.9
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 2.5e-13 81.6 93 43.0
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 3.2e-13 81.3 105 42.9
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 5.5e-13 80.5 84 46.4
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.1e-13 80.1 91 44.0
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 7.1e-13 80.1 95 38.9
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 7.1e-13 80.1 105 41.9
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 7.1e-13 80.1 85 45.9
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 9.3e-13 79.7 107 43.0
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 1.6e-12 79.0 94 40.4
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 3.5e-12 77.8 107 39.3
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 6.0e-12 77.0 85 44.7
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 6.0e-12 77.0 134 38.8
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 1.3e-11 75.9 104 39.4
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.3e-11 75.9 89 39.3
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 1.3e-11 75.9 117 38.5
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 1.3e-11 75.9 110 39.1
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 1.3e-11 75.9 110 39.1
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 1.3e-11 75.9 110 41.8
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 2.3e-11 75.1 96 44.8
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 3.0e-11 74.7 102 41.2
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 3.9e-11 74.3 120 37.5
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 1.1e-10 72.8 104 41.3
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.5e-10 72.4 79 44.3
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 1.5e-10 72.4 79 45.6
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 1.9e-10 72.0 83 41.0
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 1.9e-10 72.0 97 36.1
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 1.9e-10 72.0 85 41.2
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.9e-10 72.0 121 38.8
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 2.5e-10 71.6 85 40.0
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 2.5e-10 71.6 94 38.3
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 2.5e-10 71.6 96 41.7
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 4.3e-10 70.9 102 40.2
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 4.3e-10 70.9 103 37.9
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 4.3e-10 70.9 87 41.4
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 4.3e-10 70.9 102 40.2
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 5.7e-10 70.5 109 33.9
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 7.4e-10 70.1 92 38.0
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 7.4e-10 70.1 104 40.4
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 9.7e-10 69.7 105 37.1
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 1.3e-09 69.3 107 36.4
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 1.3e-09 69.3 103 37.9
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 1.6e-09 68.9 102 36.3
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.6e-09 68.9 142 31.7
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 2.2e-09 68.6 102 41.2
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 2.2e-09 68.6 102 41.2
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 2.8e-09 68.2 71 45.1
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 3.7e-09 67.8 100 39.0
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 4.8e-09 67.4 102 39.2
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.8e-09 67.4 102 40.2
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 6.3e-09 67.0 102 39.2
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 6.3e-09 67.0 102 39.2
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 8.2e-09 66.6 94 41.5
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 8.2e-09 66.6 102 40.2
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 1.4e-08 65.9 94 41.5
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 1.4e-08 65.9 94 41.5
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 1.4e-08 65.9 94 41.5
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 1.8e-08 65.5 94 41.5
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 3.1e-08 64.7 94 41.5
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 4.1e-08 64.3 94 40.4
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 4.1e-08 64.3 94 41.5
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 4.1e-08 64.3 129 31.8
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 5.3e-08 63.9 94 40.4
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 6.9e-08 63.5 94 40.4
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 5.0e-06 57.4 78 41.0
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 5.0e-06 57.4 78 41.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (1 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (6 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (3 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings