Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0513900 Oryza sativa ssp. japonica HOM05D004384 ORTHO05D005797 0.0e+00 2097.4 1032 100.0
Os11g0518900 Oryza sativa ssp. japonica HOM05D004384 ORTHO05D005797 1.6e-160 571.2 921 36.2
Os11g0513500 Oryza sativa ssp. japonica HOM05D004384 ORTHO05D294786 2.3e-103 381.3 208 88.5
Os11g0519500 Oryza sativa ssp. japonica HOM05D004384 ORTHO05D300109 1.3e-74 285.8 774 28.6
Os01g0363900 Oryza sativa ssp. japonica HOM05D004384 ORTHO05D005797 1.5e-57 229.2 471 31.6
Prupe.6G336100 Prunus persica HOM05D004384 ORTHO05D005797 8.0e-56 223.4 480 31.9
Nn3g21301 Nelumbo nucifera HOM05D004384 ORTHO05D005797 2.3e-55 221.9 482 33.0
Zm00001eb341370 Zea mays HOM05D004384 ORTHO05D005797 2.3e-55 221.9 475 32.0
Cpa.g.sc117.32 Carica papaya HOM05D004384 ORTHO05D005797 1.5e-54 219.2 452 33.0
MD04G1216400 Malus domestica HOM05D004384 ORTHO05D005797 3.4e-54 218.0 508 30.7
TAR362G1140 Trochodendron aralioides HOM05D004384 ORTHO05D005797 3.4e-54 218.0 479 32.6
MD12G1232900 Malus domestica HOM05D004384 ORTHO05D005797 4.4e-54 217.6 508 30.5
FAN05G1088 Fragaria x ananassa HOM05D004384 ORTHO05D005797 1.3e-53 216.1 461 32.1
FAN14G1587 Fragaria x ananassa HOM05D004384 ORTHO05D005797 1.3e-53 216.1 461 32.1
Sed0012875 Sechium edule HOM05D004384 ORTHO05D005797 2.2e-53 215.3 479 31.7
FAN05G3638 Fragaria x ananassa HOM05D004384 ORTHO05D005797 2.9e-53 214.9 461 32.1
FAN02G3203 Fragaria x ananassa HOM05D004384 ORTHO05D005797 3.7e-53 214.5 461 32.1
arahy.Tifrunner.gnm1.ann1.KAQB8D Arachis hypogaea HOM05D004384 ORTHO05D005797 4.9e-53 214.2 480 31.7
FAN09G2428 Fragaria x ananassa HOM05D004384 ORTHO05D005797 4.9e-53 214.2 461 32.1
FAN09G2922 Fragaria x ananassa HOM05D004384 ORTHO05D005797 4.9e-53 214.2 461 32.1
FvH4_6g04110 Fragaria vesca HOM05D004384 ORTHO05D005797 6.4e-53 213.8 461 31.9
VMungo0540G2235 Vigna mungo HOM05D004384 ORTHO05D005797 6.4e-53 213.8 456 31.4
CANSAT54G2523 Cannabis sativa HOM05D004384 ORTHO05D005797 8.3e-53 213.4 460 32.6
PSO170G1333 Papaver somniferum HOM05D004384 ORTHO05D005797 8.3e-53 213.4 466 32.2
Glyma.03G243400 Glycine max HOM05D004384 ORTHO05D005797 1.4e-52 212.6 464 32.1
Psat3g008440 Pisum sativum HOM05D004384 ORTHO05D005797 1.4e-52 212.6 454 32.2
ClCG02G016280 Citrullus lanatus HOM05D004384 ORTHO05D005797 5.4e-52 210.7 483 32.1
Aa31LG11G8890 Aethionema arabicum HOM05D004384 ORTHO05D005797 9.2e-52 209.9 479 30.5
CiPaw.07G010400 Carya illinoinensis HOM05D004384 ORTHO05D005797 1.2e-51 209.5 508 29.9
Dinv04274 Davidia involucrata HOM05D004384 ORTHO05D005797 1.6e-51 209.1 460 32.2
THA.LOC104821698 Tarenaya hassleriana HOM05D004384 ORTHO05D005797 1.6e-51 209.1 476 31.5
CARHR185780 Cardamine hirsuta HOM05D004384 ORTHO05D005797 2.0e-51 208.8 503 29.6
Nitab4.5_0010351g0010 Nicotiana tabacum HOM05D004384 ORTHO05D005797 2.0e-51 208.8 510 30.4
Sp2g20420 Schrenkiella parvula HOM05D004384 ORTHO05D005797 2.0e-51 208.8 479 31.1
TWI56G1253 Tripterygium wilfordii HOM05D004384 ORTHO05D005797 2.0e-51 208.8 477 29.8
AUR62005028 Chenopodium quinoa HOM05D004384 ORTHO05D005797 2.7e-51 208.4 503 29.6
RcHm_v2.0_Chr3g0452661 Rosa chinensis HOM05D004384 ORTHO05D005797 2.7e-51 208.4 461 31.7
Solyc01g098170.3 Solanum lycopersicum HOM05D004384 ORTHO05D005797 3.5e-51 208.0 510 30.2
Lj1g0011638 Lotus japonicus HOM05D004384 ORTHO05D005797 4.6e-51 207.6 481 30.8
HPP92_011308 Vanilla planifolia HOM05D004384 ORTHO05D005797 4.6e-51 207.6 475 30.9
C07p40520 Brassica napus HOM05D004384 ORTHO05D005797 7.8e-51 206.8 479 30.1
Duzib177G1205 Durio zibethinus HOM05D004384 ORTHO05D005797 7.8e-51 206.8 510 30.8
Cc02_g32190 Coffea canephora HOM05D004384 ORTHO05D005797 1.0e-50 206.5 503 29.6
GSVIVG01021908001 Vitis vinifera HOM05D004384 ORTHO05D005797 1.0e-50 206.5 506 30.0
Aqoxy179s001 Aquilegia oxysepala HOM05D004384 ORTHO05D005797 1.3e-50 206.1 484 30.2
Aqoxy2G03095 Aquilegia oxysepala HOM05D004384 ORTHO05D005797 1.3e-50 206.1 484 30.2
AL3G15430 Arabidopsis lyrata HOM05D004384 ORTHO05D005797 1.3e-50 206.1 506 30.2
AT3G05040 Arabidopsis thaliana HOM05D004384 ORTHO05D005797 1.3e-50 206.1 507 29.8
A06p37710 Brassica napus HOM05D004384 ORTHO05D005797 1.3e-50 206.1 477 30.2
MELO3C004347.2 Cucumis melo HOM05D004384 ORTHO05D005797 1.3e-50 206.1 479 31.7
Nitab4.5_0000245g0070 Nicotiana tabacum HOM05D004384 ORTHO05D005797 1.3e-50 206.1 510 30.8
BolC7t44588H Brassica oleracea HOM05D004384 ORTHO05D005797 1.7e-50 205.7 479 29.9
BraA06t26690Z Brassica rapa HOM05D004384 ORTHO05D005797 1.7e-50 205.7 477 30.0
AUR62000939 Chenopodium quinoa HOM05D004384 ORTHO05D005797 1.7e-50 205.7 497 30.0
CsaV3_2G004460 Cucumis sativus L. HOM05D004384 ORTHO05D005797 1.7e-50 205.7 479 31.5
Sabra13G0030800 Salix brachista HOM05D004384 ORTHO05D005797 1.7e-50 205.7 507 29.8
SalBow8G4829 Salvia bowleyana HOM05D004384 ORTHO05D005797 1.7e-50 205.7 462 30.5
Gorai.013G122800 Gossypium raimondii HOM05D004384 ORTHO05D005797 2.3e-50 205.3 506 29.4
Thecc.05G292400 Theobroma cacao HOM05D004384 ORTHO05D005797 3.0e-50 204.9 459 31.8
Gohir.D13G109200 Gossypium hirsutum HOM05D004384 ORTHO05D005797 6.6e-50 203.8 459 30.9
Ca_09392_v3 Cicer arietinum L. HOM05D004384 ORTHO05D005797 8.6e-50 203.4 454 31.3
Ciclev10000072m.g Citrus clementina HOM05D004384 ORTHO05D005797 8.6e-50 203.4 509 29.1
Thhalv10022131m.g Eutrema salsugineum HOM05D004384 ORTHO05D005797 8.6e-50 203.4 503 30.2
Glyma.19G240700 Glycine max HOM05D004384 ORTHO05D005797 8.6e-50 203.4 477 30.6
Eucgr.H04418 Eucalyptus grandis HOM05D004384 ORTHO05D005797 1.1e-49 203.0 461 31.2
Cfa006495 Carpinus fangiana HOM05D004384 ORTHO05D005797 1.5e-49 202.6 483 30.6
TPR.G6955 Trifolium pratense HOM05D004384 ORTHO05D005797 1.5e-49 202.6 454 31.7
CAN.G134.202 Capsicum annuum HOM05D004384 ORTHO05D005797 1.9e-49 202.2 508 30.1
Thhalv10003536m.g Eutrema salsugineum HOM05D004384 ORTHO05D005797 1.9e-49 202.2 479 29.9
HPP92_011286 Vanilla planifolia HOM05D004384 ORTHO05D005797 1.9e-49 202.2 438 31.7
Potri.013G032100 Populus trichocarpa HOM05D004384 ORTHO05D005797 2.5e-49 201.8 507 30.0
Rhsim10G0110700 Rhododendron simsii HOM05D004384 ORTHO05D005797 2.5e-49 201.8 464 32.5
Actinidia05750 Actinidia chinensis HOM05D004384 ORTHO05D005797 3.3e-49 201.4 472 31.4
EL10Ac4g09231 Beta vulgaris HOM05D004384 ORTHO05D005797 4.3e-49 201.1 456 30.3
COL.COLO4_13624 Corchorus olitorius HOM05D004384 ORTHO05D005797 4.3e-49 201.1 459 31.4
Carub.0003s0429 Capsella rubella HOM05D004384 ORTHO05D005797 5.6e-49 200.7 509 29.9
Haze_04294 Corylus avellana HOM05D004384 ORTHO05D005797 5.6e-49 200.7 485 29.9
PGR004G0471 Punica granatum HOM05D004384 ORTHO05D005797 5.6e-49 200.7 477 30.8
ECA238G0831 Erigeron canadensis HOM05D004384 ORTHO05D005797 7.3e-49 200.3 467 30.8
Migut.B01068 Erythranthe guttata HOM05D004384 ORTHO05D005797 7.3e-49 200.3 487 30.2
Manes.09G159100 Manihot esculenta HOM05D004384 ORTHO05D005797 9.5e-49 199.9 459 32.2
Ah.06g192860 Amaranthus hybridus HOM05D004384 ORTHO05D005797 1.2e-48 199.5 455 30.5
arahy.Tifrunner.gnm1.ann1.RD3H93 Arachis hypogaea HOM05D004384 ORTHO05D005797 1.2e-48 199.5 435 32.9
Peaxi162Scf00225g00421 Petunia axillaris HOM05D004384 ORTHO05D005797 1.6e-48 199.1 463 31.3
Medtr7g114260 Medicago truncatula HOM05D004384 ORTHO05D005797 2.1e-48 198.7 501 29.3
DCAR_022275 Daucus carota HOM05D004384 ORTHO05D005797 2.8e-48 198.4 481 29.9
Gohir.A13G171600 Gossypium hirsutum HOM05D004384 ORTHO05D005797 4.7e-48 197.6 511 29.7
QL03p001130 Quercus lobata HOM05D004384 ORTHO05D005797 1.4e-47 196.1 467 32.1
Sp3g03870 Schrenkiella parvula HOM05D004384 ORTHO05D005797 1.4e-47 196.1 511 31.3
CDE01G0361 Ceratophyllum demersum HOM05D004384 ORTHO05D005797 1.8e-47 195.7 483 29.4
Lalb_Chr04g0261021 Lupinus albus HOM05D004384 ORTHO05D005797 1.8e-47 195.7 461 30.4
ATR0618G249 Amborella trichopoda HOM05D004384 ORTHO05D005797 2.3e-47 195.3 486 29.2
MSTRG.20437 Avicennia marina HOM05D004384 ORTHO05D005797 4.0e-47 194.5 457 30.9
Sc06g0003540 Simmondsia chinensis HOM05D004384 ORTHO05D005797 6.8e-47 193.7 478 30.1
Lsat_1_v5_gn_2_64920 Lactuca sativa HOM05D004384 ORTHO05D005797 2.0e-46 192.2 448 30.1
Hund07007 Selenicereus undatus HOM05D004384 ORTHO05D005797 2.0e-46 192.2 506 29.4
HanXRQChr14g0446631 Helianthus annuus HOM05D004384 ORTHO05D005797 5.8e-46 190.7 489 29.2
Carub.0006s2534 Capsella rubella HOM05D004384 ORTHO05D005797 3.7e-45 188.0 507 28.0
Phvul.006G097400 Phaseolus vulgaris HOM05D004384 ORTHO05D005797 6.0e-43 180.6 369 32.2
SGA_v2.0_scaffold36G14404 Striga asiatica HOM05D004384 ORTHO05D005797 3.0e-42 178.3 522 28.0
Oeu053262.1 Olea europaea HOM05D004384 ORTHO05D005797 6.6e-42 177.2 472 29.0
vmacro05244 Vaccinium macrocarpon HOM05D004384 ORTHO05D005797 1.2e-40 172.9 338 32.5
Lj7A481G46 Lonicera japonica HOM05D004384 ORTHO05D005797 6.2e-40 170.6 415 30.4
CSS0010917 Camellia sinensis var. sinensis HOM05D004384 ORTHO05D005797 8.1e-40 170.2 455 30.1
Gohir.A13G106433 Gossypium hirsutum HOM05D004384 ORTHO05D005797 1.1e-39 169.9 340 32.1
unitig_0.g2222 Utricularia gibba HOM05D004384 ORTHO05D005797 1.0e-34 153.3 346 28.9
Gorai.013G202700 Gossypium raimondii HOM05D004384 ORTHO05D005797 1.7e-34 152.5 464 29.1
Gohir.D13G177400 Gossypium hirsutum HOM05D004384 ORTHO05D005797 1.1e-33 149.8 451 29.0
Atru.chr2.639 Acer truncatum HOM05D004384 ORTHO05D005797 7.3e-33 147.1 314 29.9
BcaNung04267 Brassica carinata HOM05D004384 ORTHO05D005797 2.1e-32 145.6 313 30.0
BcaB04g21343 Brassica carinata HOM05D004384 ORTHO05D005797 1.8e-31 142.5 446 27.6
Medtr1g063040 Medicago truncatula HOM05D004384 ORTHO05D005797 1.5e-30 139.4 255 32.9
BolC1t05723H Brassica oleracea HOM05D004384 ORTHO05D005797 4.4e-30 137.9 445 26.3
SEGI_23591 Sequoiadendron giganteum HOM05D004384 ORTHO05D005797 1.7e-29 136.0 255 33.7
BcaC05g29989 Brassica carinata HOM05D004384 ORTHO05D005797 5.4e-28 131.0 239 33.9
PGSC0003DMG400022491 Solanum tuberosum HOM05D004384 ORTHO05D005797 1.2e-27 129.8 224 35.3
BNapus_Darmor_BZH_scaffold_78p01040 Brassica napus HOM05D004384 ORTHO05D005797 1.3e-26 126.3 448 26.8
BraA01t04501Z Brassica rapa HOM05D004384 ORTHO05D005797 3.0e-26 125.2 446 26.5
Pp3c11_26800 Physcomitrium patens HOM05D004384 ORTHO05D005797 1.9e-25 122.5 505 23.4
Pp3c7_3740 Physcomitrium patens HOM05D004384 ORTHO05D005797 3.3e-25 121.7 405 25.4
Mapoly0015s0189 Marchantia polymorpha HOM05D004384 ORTHO05D005797 6.9e-23 114.0 375 26.7
Sopen00g006590 Solanum pennellii HOM05D004384 ORTHO05D005797 1.0e-18 100.1 200 34.0
Sopen01g041750 Solanum pennellii HOM05D004384 ORTHO05D005797 1.0e-18 100.1 200 34.0
SMO145G0253 Selaginella moellendorffii HOM05D004384 ORTHO05D005797 1.6e-16 92.8 353 24.9
AagrBONN_evm.TU.Sc2ySwM_340.422 Anthoceros agrestis HOM05D004384 ORTHO05D005797 4.8e-16 91.3 325 24.0
CARHR079360 Cardamine hirsuta HOM05D004384 ORTHO05D005797 5.3e-15 87.8 252 28.2
Os11g0517800 Oryza sativa ssp. japonica HOM05D004384 ORTHO05D299849 2.0e-06 59.3 68 42.6

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (6 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings