Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.1e-192 676.4 334 100.0
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.5e-141 506.5 303 82.8
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.4e-110 403.7 309 63.1
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 7.7e-109 397.9 315 62.2
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.0e-108 397.5 309 60.2
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 5.0e-108 395.2 320 58.1
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 6.5e-108 394.8 321 58.9
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 6.5e-108 394.8 320 57.5
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.5e-107 393.7 309 59.2
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 4.2e-107 392.1 319 58.6
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 4.2e-107 392.1 309 58.9
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 2.1e-106 389.8 320 57.2
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 6.1e-106 388.3 318 57.5
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 6.1e-106 388.3 318 57.5
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 1.0e-105 387.5 320 56.9
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.4e-105 387.1 323 58.2
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 3.0e-105 386.0 320 56.6
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 3.0e-105 386.0 306 58.5
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 4.0e-105 385.6 311 58.8
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 5.2e-105 385.2 326 57.7
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 8.8e-105 384.4 326 57.1
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 2.6e-104 382.9 322 57.5
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.7e-103 380.2 322 57.1
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 2.8e-103 379.4 311 59.5
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 2.8e-103 379.4 309 58.6
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.8e-103 379.4 309 57.9
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 4.8e-103 378.6 310 57.7
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 6.3e-103 378.3 320 58.4
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.8e-102 376.7 318 56.0
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.4e-102 376.3 309 57.9
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 3.1e-102 375.9 309 58.3
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.1e-102 375.9 310 57.7
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 4.1e-102 375.6 326 55.2
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.6e-101 373.6 309 57.3
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.0e-101 373.2 318 56.9
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.7e-101 372.9 308 58.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 3.5e-101 372.5 309 57.9
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 4.5e-101 372.1 309 57.0
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.0e-100 370.9 322 56.8
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.0e-100 370.9 309 57.3
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.8e-100 369.0 339 55.5
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 5.0e-100 368.6 309 55.7
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 8.5e-100 367.9 297 58.6
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 1.1e-99 367.5 309 55.7
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 1.9e-99 366.7 309 56.3
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 5.5e-99 365.2 319 55.8
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 7.2e-99 364.8 315 54.6
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 7.2e-99 364.8 309 55.3
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 9.4e-99 364.4 309 55.3
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 9.4e-99 364.4 332 52.4
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.6e-98 363.6 309 55.3
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.6e-98 363.6 331 53.5
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 2.7e-98 362.8 306 55.6
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 3.6e-98 362.5 336 52.7
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.0e-97 360.9 310 55.5
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.0e-97 360.9 310 55.5
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.4e-97 360.5 310 55.5
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 3.0e-97 359.4 309 56.0
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 3.0e-97 359.4 321 55.8
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 3.0e-97 359.4 306 54.9
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 4.0e-97 359.0 342 52.3
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 4.0e-97 359.0 309 56.6
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.5e-96 357.1 313 56.5
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.3e-95 354.0 309 53.1
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.3e-95 354.0 294 56.8
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.7e-95 353.6 311 56.9
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 4.8e-95 352.1 320 52.5
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 3.1e-94 349.4 266 61.3
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 4.1e-94 349.0 289 57.4
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.0e-92 344.4 310 51.0
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.2e-92 343.2 337 49.0
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.9e-91 340.1 317 53.3
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 5.5e-91 338.6 284 58.8
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.6e-90 337.0 309 52.1
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 1.6e-90 337.0 317 52.7
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 6.1e-90 335.1 317 52.7
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 5.2e-89 332.0 319 52.4
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.5e-88 330.5 309 53.1
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 9.8e-88 327.8 277 56.3
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.3e-87 327.4 310 49.4
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.7e-87 327.0 310 50.0
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 2.8e-87 326.2 321 50.5
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 4.9e-87 325.5 317 50.8
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 6.3e-87 325.1 312 49.0
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 3.1e-86 322.8 320 49.7
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 9.2e-86 321.2 309 51.5
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 4.5e-85 318.9 311 48.2
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 5.6e-83 312.0 253 58.1
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 8.9e-81 304.7 307 47.2
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 8.9e-81 304.7 307 47.2
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.4e-78 296.6 306 46.4
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 4.1e-78 295.8 234 59.0
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.7e-77 293.1 235 60.0
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.9e-77 292.0 318 45.9
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.0e-76 291.2 306 47.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 2.3e-76 290.0 315 47.6
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.3e-76 290.0 307 45.3
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 3.0e-76 289.7 310 47.7
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 6.6e-76 288.5 331 47.4
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 4.3e-75 285.8 259 53.7
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.1e-74 283.5 307 46.3
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.8e-72 275.4 319 43.9
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 6.0e-61 238.8 321 40.8
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.3e-55 221.1 213 51.6
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.1e-54 218.0 309 39.8
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 5.4e-54 215.7 220 45.5
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.3e-52 211.1 336 35.7
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 5.6e-43 179.1 309 35.9
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.1e-25 121.7 139 43.2
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 2.6e-24 117.1 141 47.5
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.2e-13 81.6 73 45.2

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (6 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings