Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0426400 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D001079 2.6e-46 188.3 94 100.0
Os11g0428800 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D001079 3.0e-18 95.1 63 73.0
PSO832G3906 Papaver somniferum HOM05D000098 ORTHO05D001079 1.1e-12 76.6 59 57.6
TAR362G0573 Trochodendron aralioides HOM05D000098 ORTHO05D001079 2.3e-10 68.9 64 50.0
PSO764G0297 Papaver somniferum HOM05D000098 ORTHO05D001079 3.0e-10 68.6 63 52.4
PSO832G2510 Papaver somniferum HOM05D000098 ORTHO05D001079 3.0e-10 68.6 63 52.4
PSO541G3751 Papaver somniferum HOM05D000098 ORTHO05D001079 6.7e-10 67.4 63 50.8
ATR0736G057 Amborella trichopoda HOM05D000098 ORTHO05D001079 2.0e-09 65.9 63 52.4
PSO675G8997 Papaver somniferum HOM05D000098 ORTHO05D001079 3.3e-09 65.1 63 49.2
PSO675G6732 Papaver somniferum HOM05D000098 ORTHO05D001079 4.3e-09 64.7 63 49.2
PSO170G0524 Papaver somniferum HOM05D000098 ORTHO05D001079 5.7e-09 64.3 78 43.6
PSO063G5016 Papaver somniferum HOM05D000098 ORTHO05D001079 7.4e-09 63.9 78 42.3
PSO541G3811 Papaver somniferum HOM05D000098 ORTHO05D001079 7.4e-09 63.9 63 49.2
Zm00001eb216460 Zea mays HOM05D000098 ORTHO05D001079 1.7e-08 62.8 62 51.6
Zm00001eb054730 Zea mays HOM05D000098 ORTHO05D001079 2.2e-08 62.4 62 50.0
Zm00001eb054710 Zea mays HOM05D000098 ORTHO05D001079 2.8e-08 62.0 59 52.5
THA.LOC104820032 Tarenaya hassleriana HOM05D000098 ORTHO05D001079 3.7e-08 61.6 62 43.5
PSO063G3322 Papaver somniferum HOM05D000098 ORTHO05D001079 4.8e-08 61.2 63 44.4
Os06g0266400 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D001079 6.3e-08 60.8 59 47.5
CSS0001571 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 8.2e-08 60.5 63 47.6
Nitab4.5_0025961g0020 Nicotiana tabacum HOM05D000098 ORTHO05D001079 8.2e-08 60.5 63 46.0
SEGI_10198 Sequoiadendron giganteum HOM05D000098 ORTHO05D001079 1.1e-07 60.1 60 48.3
HPP92_016582 Vanilla planifolia HOM05D000098 ORTHO05D001079 1.1e-07 60.1 60 50.0
ECA236G1230 Erigeron canadensis HOM05D000098 ORTHO05D001079 1.4e-07 59.7 66 42.4
ATR0564G019 Amborella trichopoda HOM05D000098 ORTHO05D001079 1.8e-07 59.3 59 45.8
MD05G1176800 Malus domestica HOM05D000098 ORTHO05D001079 1.8e-07 59.3 62 48.4
Os03g0709300 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D001079 1.8e-07 59.3 59 49.2
CSS0002254 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 2.4e-07 58.9 63 46.0
CSS0013077 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 3.1e-07 58.5 63 46.0
CSS0039195 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 3.1e-07 58.5 63 46.0
MBI02_g10703_MAGBIO Magnolia biondii HOM05D000098 ORTHO05D000523 3.1e-07 58.5 60 50.0
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 3.1e-07 58.5 58 51.7
Sopen01g046840 Solanum pennellii HOM05D000098 ORTHO05D001079 3.1e-07 58.5 79 43.0
Migut.B00672 Erythranthe guttata HOM05D000098 ORTHO05D001079 4.1e-07 58.2 64 48.4
Migut.B00674 Erythranthe guttata HOM05D000098 ORTHO05D001079 4.1e-07 58.2 64 48.4
CDE05G0335 Ceratophyllum demersum HOM05D000098 ORTHO05D001079 5.3e-07 57.8 60 45.0
Lalb_Chr08g0240861 Lupinus albus HOM05D000098 ORTHO05D001079 5.3e-07 57.8 59 47.5
THA.LOC104820480 Tarenaya hassleriana HOM05D000098 ORTHO05D001079 5.3e-07 57.8 60 48.3
Zm00001eb418270 Zea mays HOM05D000098 ORTHO05D001079 5.3e-07 57.8 55 47.3
CSS0036376 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 6.9e-07 57.4 59 47.5
Ciclev10022827m.g Citrus clementina HOM05D000098 ORTHO05D001079 6.9e-07 57.4 64 43.8
Migut.B00670 Erythranthe guttata HOM05D000098 ORTHO05D001079 6.9e-07 57.4 62 46.8
Nitab4.5_0003819g0020 Nicotiana tabacum HOM05D000098 ORTHO05D001079 6.9e-07 57.4 63 46.0
PGR042G2105 Punica granatum HOM05D000098 ORTHO05D001079 6.9e-07 57.4 59 47.5
SGA_v2.0_scaffold110G31295 Striga asiatica HOM05D000098 ORTHO05D001079 6.9e-07 57.4 64 46.9
Zm00001eb423780 Zea mays HOM05D000098 ORTHO05D001079 6.9e-07 57.4 59 44.1
Aqoxy6G00708 Aquilegia oxysepala HOM05D000098 ORTHO05D000523 9.1e-07 57.0 64 45.3
CSS0004169 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 9.1e-07 57.0 62 45.2
Ca_16641_v3 Cicer arietinum L. HOM05D000098 ORTHO05D001079 9.1e-07 57.0 61 45.9
HanXRQChr00c0095g0571661 Helianthus annuus HOM05D000098 ORTHO05D001079 9.1e-07 57.0 63 49.2
HanXRQChr11g0340371 Helianthus annuus HOM05D000098 ORTHO05D001079 9.1e-07 57.0 63 49.2
Peaxi162Scf00011g00016 Petunia axillaris HOM05D000098 ORTHO05D001079 9.1e-07 57.0 64 45.3
Hund26754 Selenicereus undatus HOM05D006798 ORTHO05D001079 9.1e-07 57.0 60 48.3
TPR.G24754 Trifolium pratense HOM05D000098 ORTHO05D001079 9.1e-07 57.0 60 45.0
Zm00001eb061740 Zea mays HOM05D000098 ORTHO05D001077 9.1e-07 57.0 64 46.9
Zm00001eb212510 Zea mays HOM05D000098 ORTHO05D001077 9.1e-07 57.0 64 45.3
Ah.05g167480 Amaranthus hybridus HOM05D000098 ORTHO05D001079 1.2e-06 56.6 59 45.8
EL10Ac2g02843 Beta vulgaris HOM05D014602 ORTHO05D000523 1.2e-06 56.6 60 48.3
MELO3C008424.2 Cucumis melo HOM05D000098 ORTHO05D001079 1.2e-06 56.6 62 46.8
Lj2A644T11 Lonicera japonica HOM05D000098 ORTHO05D001079 1.2e-06 56.6 62 46.8
AUR62014207 Chenopodium quinoa HOM05D000098 ORTHO05D000523 1.5e-06 56.2 61 45.9
FAN13G2786 Fragaria x ananassa HOM05D000098 ORTHO05D001079 1.5e-06 56.2 60 43.3
Gohir.A01G177600 Gossypium hirsutum HOM05D000098 ORTHO05D001079 1.5e-06 56.2 60 46.7
Gohir.D01G168500 Gossypium hirsutum HOM05D000098 ORTHO05D001079 1.5e-06 56.2 60 46.7
Gorai.002G209100 Gossypium raimondii HOM05D000098 ORTHO05D001079 1.5e-06 56.2 60 46.7
Lsat_1_v5_gn_7_77861 Lactuca sativa HOM05D000098 ORTHO05D001079 1.5e-06 56.2 63 44.4
Nitab4.5_0003819g0010 Nicotiana tabacum HOM05D000098 ORTHO05D001079 1.5e-06 56.2 64 45.3
Sed0007016 Sechium edule HOM05D000098 ORTHO05D001079 1.5e-06 56.2 83 37.3
Solyc01g104390.2 Solanum lycopersicum HOM05D000098 ORTHO05D001079 1.5e-06 56.2 64 45.3
Solyc01g104400.3 Solanum lycopersicum HOM05D000098 ORTHO05D001079 1.5e-06 56.2 62 46.8
TPR.G33045 Trifolium pratense HOM05D000098 ORTHO05D001079 1.5e-06 56.2 59 42.4
unitig_578.g16187 Utricularia gibba HOM05D000098 ORTHO05D000523 1.5e-06 56.2 61 49.2
HPP92_009440 Vanilla planifolia HOM05D000098 ORTHO05D001079 1.5e-06 56.2 62 41.9
VMungo1309G3160 Vigna mungo HOM05D000098 ORTHO05D001079 1.5e-06 56.2 59 45.8
CSS0015557 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 2.0e-06 55.8 61 49.2
CSS0023141 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 2.0e-06 55.8 61 49.2
CSS0035356 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 2.0e-06 55.8 59 45.8
CSS0036152 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D001079 2.0e-06 55.8 59 45.8
AUR62041223 Chenopodium quinoa HOM05D000098 ORTHO05D000523 2.0e-06 55.8 59 44.1
FvH4_5g30150 Fragaria vesca HOM05D000098 ORTHO05D001079 2.0e-06 55.8 60 43.3
FAN18G0920 Fragaria x ananassa HOM05D000098 ORTHO05D001079 2.0e-06 55.8 60 43.3
Gohir.A09G085800 Gossypium hirsutum HOM05D000098 ORTHO05D001079 2.0e-06 55.8 61 44.3
Gohir.D09G085900 Gossypium hirsutum HOM05D000098 ORTHO05D001079 2.0e-06 55.8 61 44.3
Gorai.006G102000 Gossypium raimondii HOM05D000098 ORTHO05D001079 2.0e-06 55.8 61 44.3
MD15G1418100 Malus domestica HOM05D000098 ORTHO05D001079 2.0e-06 55.8 62 43.5
Nitab4.5_0011920g0010 Nicotiana tabacum HOM05D000098 ORTHO05D001079 2.0e-06 55.8 66 43.9
Oeu000194.1 Olea europaea HOM05D000098 ORTHO05D001079 2.0e-06 55.8 62 41.9
Os03g0850900 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D001079 2.0e-06 55.8 62 43.5
ATR0564G138 Amborella trichopoda HOM05D000098 ORTHO05D001079 2.6e-06 55.5 59 44.1
A09p42300 Brassica napus HOM05D000098 ORTHO05D000523 2.6e-06 55.5 58 48.3
BraA09t39711Z Brassica rapa HOM05D000098 ORTHO05D000523 2.6e-06 55.5 58 48.3
CANSAT11G1299 Cannabis sativa HOM05D000098 ORTHO05D001079 2.6e-06 55.5 61 45.9
ClCG08G006340 Citrullus lanatus HOM05D000098 ORTHO05D001079 2.6e-06 55.5 60 46.7
Gohir.A02G068204 Gossypium hirsutum HOM05D000098 ORTHO05D001079 2.6e-06 55.5 62 45.2
Gohir.D02G074600 Gossypium hirsutum HOM05D000098 ORTHO05D001079 2.6e-06 55.5 62 45.2
Gorai.005G084000 Gossypium raimondii HOM05D000098 ORTHO05D001079 2.6e-06 55.5 62 45.2
MBI06_g03319_MAGBIO Magnolia biondii HOM05D000098 ORTHO05D000523 2.6e-06 55.5 64 42.2
Os03g0807500 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D001077 2.6e-06 55.5 60 46.7
Prupe.1G562300 Prunus persica HOM05D000098 ORTHO05D001079 2.6e-06 55.5 64 40.6
SEGI_29153 Sequoiadendron giganteum HOM05D000098 ORTHO05D001079 2.6e-06 55.5 61 42.6
TPR.G15152 Trifolium pratense HOM05D000098 ORTHO05D001079 2.6e-06 55.5 62 43.5
arahy.Tifrunner.gnm1.ann1.SHB49X Arachis hypogaea HOM05D000098 ORTHO05D001079 3.4e-06 55.1 62 43.5
BcaC05g26174 Brassica carinata HOM05D000098 ORTHO05D000523 3.4e-06 55.1 58 48.3
C05p21580 Brassica napus HOM05D000098 ORTHO05D000523 3.4e-06 55.1 58 48.3
BolC5t30853H Brassica oleracea HOM05D000098 ORTHO05D000523 3.4e-06 55.1 58 48.3
CAN.G1305.36 Capsicum annuum HOM05D000098 ORTHO05D001079 3.4e-06 55.1 63 42.9
CAN.G1305.37 Capsicum annuum HOM05D000098 ORTHO05D001079 3.4e-06 55.1 64 46.9
ClCG05G009780 Citrullus lanatus HOM05D000098 ORTHO05D001079 3.4e-06 55.1 61 42.6
FAN13G0650 Fragaria x ananassa HOM05D000098 ORTHO05D001079 3.4e-06 55.1 60 46.7
Medtr3g089035 Medicago truncatula HOM05D000098 ORTHO05D001079 3.4e-06 55.1 59 44.1
SEGI_39016 Sequoiadendron giganteum HOM05D000098 ORTHO05D001079 3.4e-06 55.1 59 45.8
Sopen01g046830 Solanum pennellii HOM05D000098 ORTHO05D001079 3.4e-06 55.1 64 45.3
GSVIVG01023002001 Vitis vinifera HOM05D000098 ORTHO05D001079 3.4e-06 55.1 61 44.3
arahy.Tifrunner.gnm1.ann1.6U6MGC Arachis hypogaea HOM05D000098 ORTHO05D001079 4.5e-06 54.7 64 40.6
BcaC03g17172 Brassica carinata HOM05D000098 ORTHO05D001079 4.5e-06 54.7 60 43.3
A02p33140 Brassica napus HOM05D000098 ORTHO05D001079 4.5e-06 54.7 60 43.3
C02p50950 Brassica napus HOM05D000098 ORTHO05D001079 4.5e-06 54.7 60 43.3
BolC2t11186H Brassica oleracea HOM05D000098 ORTHO05D001079 4.5e-06 54.7 60 43.3
BraA02t08337Z Brassica rapa HOM05D000098 ORTHO05D001079 4.5e-06 54.7 60 43.3
CARHR145280 Cardamine hirsuta HOM05D000098 ORTHO05D001079 4.5e-06 54.7 59 44.1
Migut.B00676 Erythranthe guttata HOM05D000098 ORTHO05D001079 4.5e-06 54.7 58 46.6
HanXRQChr11g0340541 Helianthus annuus HOM05D000098 ORTHO05D001079 4.5e-06 54.7 63 42.9
MD08G1224900 Malus domestica HOM05D000098 ORTHO05D001079 4.5e-06 54.7 62 41.9
Os02g0731400 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D001079 4.5e-06 54.7 62 48.4
PSO017G0078 Papaver somniferum HOM05D000098 ORTHO05D001079 4.5e-06 54.7 59 45.8
Peaxi162Scf00915g00110 Petunia axillaris HOM05D000098 ORTHO05D001079 4.5e-06 54.7 61 44.3
Psat5g050400 Pisum sativum HOM05D000098 ORTHO05D000523 4.5e-06 54.7 60 46.7
SalBow5G3549 Salvia bowleyana HOM05D000098 ORTHO05D001079 4.5e-06 54.7 64 42.2
Hund09267 Selenicereus undatus HOM05D000098 ORTHO05D000546 4.5e-06 54.7 62 48.4
GSVIVG01028654001 Vitis vinifera HOM05D000098 ORTHO05D001079 4.5e-06 54.7 61 47.5
arahy.Tifrunner.gnm1.ann1.3J9I9S Arachis hypogaea HOM05D000098 ORTHO05D001079 5.9e-06 54.3 64 40.6
CDE06G1914 Ceratophyllum demersum HOM05D044142 ORTHO05D000523 5.9e-06 54.3 60 45.0
AUR62026803 Chenopodium quinoa HOM05D000098 ORTHO05D001079 5.9e-06 54.3 58 44.8
Dinv25788 Davidia involucrata HOM05D000098 ORTHO05D001079 5.9e-06 54.3 60 46.7
Glyma.05G169900 Glycine max HOM05D000098 ORTHO05D001079 5.9e-06 54.3 81 42.0
PSO541G5979 Papaver somniferum HOM05D000098 ORTHO05D000523 5.9e-06 54.3 60 41.7
THA.LOC104809724 Tarenaya hassleriana HOM05D000098 ORTHO05D000523 5.9e-06 54.3 61 44.3
HPP92_011208 Vanilla planifolia HOM05D000098 ORTHO05D000523 5.9e-06 54.3 60 48.3
arahy.Tifrunner.gnm1.ann1.TZW06C Arachis hypogaea HOM05D000098 ORTHO05D001079 7.7e-06 53.9 59 47.5
arahy.Tifrunner.gnm1.ann1.XVX6ST Arachis hypogaea HOM05D000098 ORTHO05D001079 7.7e-06 53.9 62 41.9
BcaB07g32258 Brassica carinata HOM05D000098 ORTHO05D000523 7.7e-06 53.9 58 46.6
BcaC06g31213 Brassica carinata HOM05D000098 ORTHO05D001079 7.7e-06 53.9 60 41.7
Cfa002563 Carpinus fangiana HOM05D000098 ORTHO05D001079 7.7e-06 53.9 61 44.3
Ca_17817_v3 Cicer arietinum L. HOM05D000098 ORTHO05D001079 7.7e-06 53.9 61 45.9
Glyma.04G242300 Glycine max HOM05D000098 ORTHO05D001079 7.7e-06 53.9 59 44.1
Glyma.06G121100 Glycine max HOM05D000098 ORTHO05D001079 7.7e-06 53.9 59 44.1
Glyma.08G128100 Glycine max HOM05D000098 ORTHO05D001079 7.7e-06 53.9 61 45.9
Lsat_1_v5_gn_1_9501 Lactuca sativa HOM05D000098 ORTHO05D001079 7.7e-06 53.9 60 43.3
Lj5P247T14 Lonicera japonica HOM05D000098 ORTHO05D001079 7.7e-06 53.9 60 48.3
Lj4g0002240 Lotus japonicus HOM05D000098 ORTHO05D001079 7.7e-06 53.9 62 43.5
PSO675G5552 Papaver somniferum HOM05D000098 ORTHO05D000523 7.7e-06 53.9 60 41.7
PGSC0003DMG400023782 Solanum tuberosum HOM05D000098 ORTHO05D001079 7.7e-06 53.9 64 45.3
PGSC0003DMG400023783 Solanum tuberosum HOM05D000098 ORTHO05D001079 7.7e-06 53.9 64 45.3
PGSC0003DMG400023784 Solanum tuberosum HOM05D000098 ORTHO05D001079 7.7e-06 53.9 64 45.3

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (3 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (5 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (10 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (4 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (4 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (3 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (7 genes)
Papaver somniferum (13 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (3 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (3 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (0 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (7 genes)

Program Settings