Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 1.3e-41 173.3 81 100.0
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 3.8e-33 145.2 80 75.0
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 2.7e-31 139.0 80 70.0
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 3.6e-31 138.7 80 68.8
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 1.3e-30 136.7 80 70.0
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 2.3e-30 136.0 80 67.5
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 5.1e-30 134.8 80 67.5
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 6.7e-30 134.4 80 68.8
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 1.1e-29 133.7 80 67.5
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.5e-29 133.3 80 66.2
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.5e-29 133.3 80 66.2
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.5e-29 133.3 80 66.2
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 1.9e-29 132.9 78 71.8
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 5.7e-29 131.3 80 63.8
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 5.7e-29 131.3 80 63.8
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 9.7e-29 130.6 80 66.2
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 9.7e-29 130.6 80 65.0
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 9.7e-29 130.6 80 65.0
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 9.7e-29 130.6 80 63.8
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 1.3e-28 130.2 80 67.5
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 2.8e-28 129.0 80 62.5
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 3.7e-28 128.6 80 66.2
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 4.8e-28 128.3 80 66.2
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 4.8e-28 128.3 80 66.2
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 4.8e-28 128.3 80 66.2
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 4.8e-28 128.3 80 62.5
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 4.8e-28 128.3 80 66.2
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 6.3e-28 127.9 79 62.0
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 6.3e-28 127.9 80 65.0
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 6.3e-28 127.9 80 63.8
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 8.2e-28 127.5 80 66.2
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 1.1e-27 127.1 80 63.8
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 1.8e-27 126.3 80 65.0
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.8e-27 126.3 80 63.8
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 2.4e-27 125.9 80 66.2
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 2.4e-27 125.9 80 58.8
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 3.1e-27 125.6 80 58.8
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 4.1e-27 125.2 80 62.5
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 6.9e-27 124.4 80 63.8
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 6.9e-27 124.4 80 63.8
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 6.9e-27 124.4 80 60.0
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 1.5e-26 123.2 80 62.5
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 1.5e-26 123.2 80 57.5
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 1.5e-26 123.2 79 63.3
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 2.0e-26 122.9 80 63.8
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 2.0e-26 122.9 80 58.8
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 4.5e-26 121.7 80 62.5
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 4.5e-26 121.7 80 58.8
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 4.5e-26 121.7 80 57.5
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 4.5e-26 121.7 92 55.4
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 7.7e-26 120.9 80 62.5
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 1.0e-25 120.6 80 62.5
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 1.0e-25 120.6 80 62.5
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 1.0e-25 120.6 80 62.5
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 1.0e-25 120.6 80 60.0
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 1.3e-25 120.2 80 62.5
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.3e-25 120.2 80 62.5
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 1.3e-25 120.2 80 56.2
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 1.7e-25 119.8 80 61.2
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 1.7e-25 119.8 80 61.2
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 2.9e-25 119.0 80 63.8
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.9e-25 119.0 80 61.2
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 3.8e-25 118.6 79 62.0
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 6.5e-25 117.9 80 60.0
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 8.5e-25 117.5 80 60.0
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 1.1e-24 117.1 80 60.0
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 1.1e-24 117.1 80 58.8
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 1.9e-24 116.3 80 60.0
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 1.9e-24 116.3 79 58.2
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 3.2e-24 115.5 79 59.5
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 3.2e-24 115.5 79 59.5
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 9.4e-24 114.0 81 58.0
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 1.2e-23 113.6 80 58.8
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 1.6e-23 113.2 80 58.8
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 2.1e-23 112.8 80 60.0
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 6.1e-23 111.3 80 57.5
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.5e-21 106.7 80 53.8
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 1.8e-19 99.8 63 61.9
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.8e-19 99.8 65 61.5
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 9.1e-19 97.4 59 62.7
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 8.5e-17 90.9 80 51.2
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 2.5e-16 89.4 65 58.5
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 1.8e-14 83.2 47 63.8
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 3.9e-14 82.0 67 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 3.7e-12 75.5 68 50.0
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 1.4e-11 73.6 51 62.7
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.6e-10 70.1 80 43.8
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 2.0e-10 69.7 101 40.6
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 3.6e-07 58.9 37 67.6
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 1.0e-06 57.4 37 56.8
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.0e-06 55.5 80 37.5

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (0 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings