Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 0.0e+00 1186.4 613 100.0
Zm00001eb164010 Zea mays HOM05D040562 ORTHO05D051656 1.9e-60 238.0 306 50.0
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 2.9e-53 214.2 343 37.9
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 3.0e-50 204.1 690 30.0
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 5.1e-50 203.4 406 34.7
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 3.3e-49 200.7 509 33.0
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 4.3e-49 200.3 441 33.8
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 2.1e-48 198.0 323 37.2
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 4.8e-48 196.8 566 30.7
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 6.2e-48 196.4 345 36.2
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 8.1e-48 196.1 319 34.5
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 1.4e-47 195.3 405 32.3
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 1.8e-47 194.9 317 36.6
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 3.1e-47 194.1 405 31.4
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 6.9e-47 193.0 319 35.4
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 1.2e-46 192.2 319 35.1
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 1.5e-46 191.8 514 31.3
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 1.5e-46 191.8 327 34.6
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 4.5e-46 190.3 319 35.1
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 4.5e-46 190.3 405 30.6
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 4.5e-46 190.3 451 31.0
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 1.0e-45 189.1 460 30.7
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 1.7e-45 188.3 533 30.8
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.2e-45 188.0 316 35.1
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 2.2e-45 188.0 531 29.8
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 3.8e-45 187.2 559 29.0
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 3.8e-45 187.2 558 29.6
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 4.9e-45 186.8 567 30.0
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 4.9e-45 186.8 564 29.8
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.4e-45 186.0 350 33.4
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 1.4e-44 185.3 620 28.9
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.9e-44 184.9 351 33.0
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.9e-44 184.9 342 33.9
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 2.5e-44 184.5 420 30.5
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.5e-44 184.5 319 34.5
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.5e-44 184.5 351 33.3
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 2.5e-44 184.5 514 28.4
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 3.2e-44 184.1 351 33.3
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 4.2e-44 183.7 319 33.5
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 1.2e-43 182.2 355 33.0
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.6e-43 181.8 356 34.3
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 1.6e-43 181.8 568 28.0
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 1.6e-43 181.8 313 34.2
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 3.5e-43 180.6 331 34.7
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 6.0e-43 179.9 374 33.2
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 1.0e-42 179.1 515 28.7
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 1.3e-42 178.7 516 28.3
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 2.3e-42 177.9 338 34.0
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 3.0e-42 177.6 407 30.7
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 6.7e-42 176.4 350 33.4
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 8.7e-42 176.0 356 32.0
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 1.9e-41 174.9 351 32.2
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.9e-41 174.9 451 30.6
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 2.5e-41 174.5 484 28.7
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 5.7e-41 173.3 352 31.8
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 5.7e-41 173.3 409 29.1
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 7.4e-41 172.9 726 27.4
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 1.3e-40 172.2 406 29.8
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.3e-40 172.2 557 27.8
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 1.6e-40 171.8 320 34.4
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 2.8e-40 171.0 343 34.4
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 3.7e-40 170.6 343 34.7
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 4.8e-40 170.2 326 31.9
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 4.8e-40 170.2 658 26.6
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 1.1e-39 169.1 320 30.3
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 1.8e-39 168.3 324 30.6
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 2.4e-39 167.9 319 33.9
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 2.4e-39 167.9 323 33.4
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 5.3e-39 166.8 565 27.3
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 6.9e-39 166.4 664 26.2
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 9.0e-39 166.0 603 28.5
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 3.4e-38 164.1 470 28.3
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 1.0e-37 162.5 401 31.7
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 1.0e-37 162.5 350 30.6
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 1.3e-37 162.2 352 31.5
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 2.9e-37 161.0 318 30.8
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 5.0e-37 160.2 338 32.5
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 6.5e-37 159.8 573 28.6
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 8.5e-37 159.5 225 39.1
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 1.4e-36 158.7 604 26.7
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 1.4e-36 158.7 651 27.2
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.4e-36 158.7 321 33.6
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 2.1e-35 154.8 319 33.2
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 2.7e-35 154.5 559 26.1
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 2.7e-35 154.5 578 25.4
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 2.7e-35 154.5 326 31.0
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 3.6e-35 154.1 558 25.8
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 3.6e-35 154.1 558 26.0
Os12g0145632 Oryza sativa ssp. japonica HOM05D040562 ORTHO05D007642 3.6e-35 154.1 123 69.1
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 4.6e-35 153.7 358 29.3
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 6.1e-35 153.3 214 39.3
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 6.1e-35 153.3 214 39.3
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 7.9e-35 152.9 332 29.5
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 2.3e-34 151.4 318 31.4
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.5e-33 148.7 561 26.7
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 7.4e-33 146.4 552 25.7
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 1.3e-32 145.6 568 24.8
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.3e-32 145.6 232 38.4
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 2.2e-32 144.8 568 25.4
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 8.2e-32 142.9 625 26.7
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 1.8e-31 141.7 316 31.3
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 1.2e-30 139.0 532 27.8
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 1.5e-30 138.7 463 27.4
Zm00001eb244210 Zea mays HOM05D040562 ORTHO05D051656 6.5e-29 133.3 149 56.4
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 3.2e-28 131.0 222 33.3
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 3.6e-27 127.5 177 40.1
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 1.2e-22 112.5 180 36.7
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 7.7e-22 109.8 189 33.9
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 1.3e-13 82.4 587 23.3
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 1.3e-13 82.4 655 23.1
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 2.5e-12 78.2 70 50.0
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 3.2e-12 77.8 189 29.1
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 1.4e-10 72.4 331 25.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings