Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 5.0e-146 521.2 279 100.0
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 1.0e-130 470.3 279 84.6
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 4.3e-129 464.9 279 83.9
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 4.6e-99 365.2 259 72.2
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 1.8e-98 363.2 267 70.4
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 5.1e-98 361.7 258 71.3
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.1e-97 360.5 258 71.7
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 7.4e-97 357.8 258 70.5
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 7.4e-97 357.8 258 70.5
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 3.7e-96 355.5 257 68.9
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 3.7e-96 355.5 258 69.8
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 8.1e-96 354.4 265 66.4
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.4e-95 353.6 261 68.2
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.8e-95 353.2 258 70.5
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.5e-94 350.1 263 67.7
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 7.6e-94 347.8 257 67.7
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.0e-93 347.4 254 69.3
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.3e-93 347.1 256 68.0
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 2.9e-93 345.9 261 67.8
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 3.8e-93 345.5 261 67.0
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 3.8e-93 345.5 262 67.9
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 4.9e-93 345.1 268 66.0
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 6.5e-93 344.7 261 66.7
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 8.4e-93 344.4 261 67.8
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 8.4e-93 344.4 261 67.4
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 8.4e-93 344.4 261 67.4
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.1e-92 344.0 267 66.7
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 1.1e-92 344.0 266 67.3
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.1e-92 344.0 266 67.3
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.1e-92 344.0 257 70.8
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 1.4e-92 343.6 261 67.4
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 1.9e-92 343.2 261 67.0
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 2.5e-92 342.8 257 67.3
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 4.2e-92 342.0 268 66.4
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 9.3e-92 340.9 266 66.9
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.2e-91 340.5 264 66.7
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.2e-91 340.5 262 65.6
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 1.6e-91 340.1 261 67.0
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.1e-91 339.7 257 69.3
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 2.7e-91 339.3 257 66.5
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.7e-91 339.3 257 66.5
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.5e-91 339.0 261 66.7
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 3.5e-91 339.0 261 66.7
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 3.5e-91 339.0 261 66.7
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.5e-91 339.0 262 65.6
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 4.6e-91 338.6 261 67.0
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.0e-90 337.4 259 65.3
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.0e-90 337.4 255 68.6
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.0e-90 337.4 262 65.3
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.0e-90 337.4 268 66.0
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.0e-90 337.4 258 65.9
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.3e-90 337.0 257 67.3
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 1.8e-90 336.7 266 65.8
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.0e-90 335.9 276 64.1
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 3.0e-90 335.9 259 65.3
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.9e-90 335.5 259 64.9
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 5.1e-90 335.1 260 66.2
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 5.1e-90 335.1 328 56.7
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 6.7e-90 334.7 254 67.7
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 6.7e-90 334.7 259 66.8
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 8.7e-90 334.3 264 65.5
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 8.7e-90 334.3 256 66.8
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 3.3e-89 332.4 258 65.5
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 9.6e-89 330.9 266 63.2
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.1e-88 329.7 275 65.8
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.1e-88 329.7 275 65.8
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 3.7e-88 328.9 269 65.4
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 3.1e-87 325.9 260 64.6
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 4.1e-87 325.5 261 63.6
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 5.3e-87 325.1 256 64.8
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 5.3e-87 325.1 275 65.1
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 5.3e-87 325.1 250 66.4
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.7e-85 320.1 257 63.8
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 2.2e-85 319.7 266 65.4
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 3.8e-85 318.9 261 63.6
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 6.5e-85 318.2 259 64.9
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.2e-84 315.8 275 63.3
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.2e-83 313.9 263 63.1
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.3e-82 310.5 259 64.5
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 6.7e-82 308.1 259 64.5
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 1.9e-81 306.6 267 61.0
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.9e-81 306.6 259 63.3
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 3.3e-81 305.8 263 61.6
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 9.7e-81 304.3 279 61.3
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 1.3e-80 303.9 279 62.4
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 3.7e-80 302.4 267 60.3
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 4.1e-79 298.9 260 61.5
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 2.7e-75 286.2 261 59.0
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 7.4e-73 278.1 264 57.6
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 3.6e-67 259.2 171 72.5
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 6.1e-67 258.5 195 66.7
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.7e-65 251.9 181 70.2
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 3.2e-60 236.1 172 67.4
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 9.4e-60 234.6 271 47.6
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 4.0e-58 229.2 259 49.4
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 2.4e-55 219.9 136 77.2
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 3.1e-55 219.5 164 68.3
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 2.0e-54 216.9 169 65.7
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.7e-53 213.8 162 67.3
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 5.5e-52 208.8 269 46.5
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 2.6e-49 199.9 279 43.0
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 5.7e-49 198.7 154 64.9
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 2.7e-46 189.9 259 45.6
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.0e-45 188.0 167 59.3
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 7.2e-44 181.8 207 46.4
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 8.0e-35 151.8 264 39.4
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.8e-34 150.6 266 39.1
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 8.0e-27 125.2 129 53.5
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 8.9e-26 121.7 78 73.1
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 2.2e-24 117.1 145 45.5
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 4.6e-22 109.4 87 60.9
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.3e-18 97.1 178 38.8
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.9e-16 90.1 257 32.3
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 8.3e-16 88.6 69 63.8
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.5e-14 83.2 65 63.1
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 3.9e-13 79.7 70 62.9
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.6e-13 79.0 135 36.3
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 6.6e-13 79.0 67 65.7
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 3.8e-08 63.2 70 51.4

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (3 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (3 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (3 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings