Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 3.6e-183 644.8 332 100.0
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.1e-163 580.1 328 91.5
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 7.6e-141 504.2 327 79.2
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.2e-140 502.7 327 78.0
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 4.9e-140 501.5 330 77.3
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 6.4e-140 501.1 331 76.1
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.4e-140 501.1 327 77.4
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.4e-139 500.0 329 76.3
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 2.4e-139 499.2 331 76.7
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.4e-139 499.2 327 77.4
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 3.2e-139 498.8 330 76.7
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 9.3e-139 497.3 327 75.8
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 9.3e-139 497.3 331 75.8
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 1.6e-138 496.5 327 76.5
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 2.1e-138 496.1 329 76.0
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.1e-138 496.1 327 75.8
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.7e-138 495.7 330 75.8
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.7e-138 495.7 327 75.8
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 3.5e-138 495.4 327 75.8
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 3.5e-138 495.4 327 75.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.6e-138 495.0 327 75.5
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 1.0e-137 493.8 327 76.1
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.0e-137 493.8 331 75.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.7e-137 493.0 327 75.8
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 1.7e-137 493.0 329 75.4
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 3.0e-137 492.3 325 76.3
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 3.0e-137 492.3 330 75.8
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 3.9e-137 491.9 326 76.1
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 3.9e-137 491.9 329 75.7
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 5.1e-137 491.5 329 75.1
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.6e-137 491.1 330 75.5
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 6.6e-137 491.1 327 74.9
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 8.7e-137 490.7 331 74.3
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.1e-136 490.3 327 76.1
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.5e-136 490.0 327 76.1
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.5e-136 490.0 327 76.1
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.5e-136 489.2 329 75.1
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.5e-136 489.2 329 75.1
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.3e-136 488.8 327 75.8
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 5.6e-136 488.0 326 75.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 5.6e-136 488.0 327 74.6
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 7.3e-136 487.6 335 74.3
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.6e-136 487.3 327 75.2
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 9.6e-136 487.3 326 74.8
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 9.6e-136 487.3 331 74.3
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.6e-135 486.5 326 75.5
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.1e-135 486.1 327 74.9
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 2.8e-135 485.7 329 74.8
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 2.8e-135 485.7 329 74.8
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.6e-135 485.3 327 74.3
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.6e-135 485.3 332 74.1
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 6.2e-135 484.6 325 75.4
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 6.2e-135 484.6 330 73.3
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.2e-135 484.6 330 73.3
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 8.1e-135 484.2 333 74.8
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 8.1e-135 484.2 333 74.8
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.1e-134 483.8 327 74.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.1e-134 483.8 327 75.2
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 1.8e-134 483.0 330 73.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.8e-134 483.0 329 73.6
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.8e-134 483.0 329 74.2
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.8e-134 483.0 329 73.9
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 2.4e-134 482.6 327 73.7
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.1e-134 482.3 330 72.7
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 4.0e-134 481.9 326 74.2
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 4.0e-134 481.9 327 73.4
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.9e-134 481.1 330 73.6
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 6.9e-134 481.1 330 75.5
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 9.0e-134 480.7 329 73.3
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.5e-133 479.9 329 75.1
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.6e-133 479.2 329 72.6
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 5.8e-133 478.0 328 73.5
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 7.6e-133 477.6 330 74.5
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 7.6e-133 477.6 325 73.5
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 3.8e-132 475.3 329 72.3
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 4.9e-132 474.9 329 72.3
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 4.9e-132 474.9 329 72.3
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 4.9e-132 474.9 329 72.3
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 4.9e-132 474.9 329 72.3
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.1e-131 473.8 329 72.0
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.9e-131 473.0 330 74.2
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 2.4e-131 472.6 328 72.6
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 3.2e-131 472.2 324 73.1
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 3.2e-131 472.2 357 68.1
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.2e-131 471.9 330 73.9
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 9.3e-131 470.7 333 71.2
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.2e-130 470.3 329 71.7
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 6.0e-130 468.0 329 71.4
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 7.9e-130 467.6 329 71.1
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 7.9e-130 467.6 329 71.4
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 7.9e-130 467.6 330 73.6
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 8.7e-129 464.2 371 67.1
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 7.4e-128 461.1 330 71.5
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.4e-128 461.1 304 76.3
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 9.6e-128 460.7 329 71.4
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 6.2e-127 458.0 381 65.4
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 5.3e-126 454.9 329 69.6
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 7.6e-125 451.1 327 71.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.3e-124 450.3 315 71.4
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.2e-124 449.5 328 71.6
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 2.9e-124 449.1 330 70.6
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 3.8e-124 448.7 454 55.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 4.9e-124 448.4 285 76.8
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 3.2e-123 445.7 325 68.9
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 5.6e-120 434.9 330 70.3
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.9e-116 421.8 376 62.8
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.4e-116 421.0 300 72.3
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 2.1e-114 416.4 279 74.9
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.1e-114 416.4 329 67.2
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 2.7e-114 416.0 328 67.7
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.8e-113 413.3 332 65.4
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 5.1e-113 411.8 324 62.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.2e-106 390.6 317 60.6
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 1.3e-105 387.1 335 63.0
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.3e-103 380.6 324 60.8
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 2.6e-101 372.9 323 61.6
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 2.3e-97 359.8 240 74.6
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 9.7e-96 354.4 234 74.8
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.8e-94 350.1 233 73.4
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 8.5e-84 314.7 274 60.2
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.1e-83 314.3 321 54.2
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 8.8e-81 304.7 197 77.2
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.5e-80 301.6 332 54.8
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 1.6e-77 293.9 220 69.5
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 8.5e-76 288.1 220 68.2
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.9e-75 287.0 226 65.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 3.0e-73 279.6 167 80.8
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 5.2e-73 278.9 220 67.7
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 2.0e-72 276.9 333 44.4
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.1e-70 271.2 335 50.4
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.5e-59 234.2 267 50.2
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 9.2e-54 214.9 163 69.3
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.0e-52 211.5 160 67.5
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 3.1e-49 199.9 329 41.3
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.6e-48 196.8 131 75.6
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-44 184.1 128 73.4
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.5e-35 154.5 102 78.4
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 2.1e-34 150.6 229 45.0
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 8.1e-34 148.7 149 54.4
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 2.9e-31 140.2 103 67.0
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 3.9e-28 129.8 90 76.7
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.9e-27 127.5 81 74.1
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.2e-26 124.8 162 46.3
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 1.4e-25 121.3 67 83.6
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.4e-25 121.3 88 65.9
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 4.0e-25 119.8 88 71.6
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 9.0e-25 118.6 73 79.5
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 7.6e-24 115.5 65 83.1
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 1.7e-23 114.4 72 73.6
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.8e-23 113.2 110 56.4
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.2e-22 109.8 77 75.3
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.3e-20 104.8 64 78.1
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 3.9e-20 103.2 77 67.5
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 3.2e-14 83.6 65 70.8
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 2.8e-10 70.5 61 63.9
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 7.6e-08 62.4 46 63.0
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 1.4e-06 58.2 33 81.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings