Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.5e-186 654.4 333 100.0
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 3.4e-181 638.3 333 97.0
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.7e-180 636.0 333 97.3
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.7e-180 636.0 333 97.3
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 4.9e-180 634.4 333 97.3
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 8.3e-180 633.6 333 97.3
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.6e-178 627.9 326 98.2
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 5.4e-171 604.4 333 91.9
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 6.6e-169 597.4 333 91.3
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.1e-167 592.4 329 91.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.1e-167 592.4 333 90.4
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.2e-164 582.4 328 89.3
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.2e-162 576.6 333 88.3
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.7e-162 575.5 333 88.0
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.9e-161 571.6 333 86.2
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 6.6e-161 570.9 333 85.9
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 2.5e-160 568.9 360 81.1
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 3.3e-160 568.5 328 87.8
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 4.3e-160 568.2 333 86.2
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.2e-159 566.6 333 85.6
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 3.6e-159 565.1 328 86.6
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.7e-159 564.7 329 86.6
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.1e-158 563.5 333 85.0
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 1.4e-158 563.1 333 85.3
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.8e-158 562.8 331 86.4
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.8e-158 562.8 328 86.6
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 3.1e-158 562.0 328 86.3
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.0e-158 561.6 331 86.4
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 4.0e-158 561.6 328 84.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 4.0e-158 561.6 333 84.7
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 5.2e-158 561.2 328 84.8
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 6.8e-158 560.8 329 86.9
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 6.8e-158 560.8 331 84.3
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.2e-157 560.1 331 86.1
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.2e-157 560.1 331 86.1
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.6e-157 558.9 328 84.5
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 4.4e-157 558.1 331 85.5
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 4.4e-157 558.1 331 85.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 7.6e-157 557.4 328 84.5
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 7.6e-157 557.4 328 84.8
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 2.9e-156 555.4 333 84.1
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 6.4e-156 554.3 329 84.8
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 6.4e-156 554.3 328 84.1
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.4e-156 553.9 333 83.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 8.4e-156 553.9 326 85.3
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.9e-155 552.7 333 83.5
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 2.4e-155 552.4 333 84.1
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.2e-155 552.0 328 83.8
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 5.4e-155 551.2 326 85.0
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.4e-155 551.2 329 84.5
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 7.1e-155 550.8 333 83.5
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 9.2e-155 550.4 333 83.8
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.2e-155 550.4 333 83.2
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 9.2e-155 550.4 326 85.9
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 9.2e-155 550.4 326 85.9
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.1e-154 549.3 328 83.2
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.5e-154 548.5 329 84.2
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 6.0e-154 547.7 333 83.8
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.0e-153 547.0 328 84.1
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.7e-153 546.2 333 83.5
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.9e-153 545.0 328 84.1
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 5.1e-153 544.7 386 74.1
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 6.6e-153 544.3 328 84.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 6.6e-153 544.3 333 82.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 6.6e-153 544.3 332 82.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 6.6e-153 544.3 301 91.4
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.1e-152 543.5 339 82.3
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 1.1e-152 543.5 333 83.2
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.5e-152 543.1 328 83.8
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 2.5e-152 542.3 331 83.4
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.3e-152 542.0 328 83.5
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.3e-152 542.0 328 83.5
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.3e-152 542.0 328 83.5
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.3e-152 542.0 328 83.5
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 3.3e-152 542.0 333 82.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 4.3e-152 541.6 328 83.5
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 5.6e-152 541.2 328 83.5
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 9.6e-152 540.4 328 83.2
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.2e-151 540.0 326 83.7
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 3.6e-151 538.5 333 82.3
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 3.6e-151 538.5 333 82.3
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 4.7e-151 538.1 328 82.9
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 4.7e-151 538.1 328 83.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 1.2e-149 533.5 331 80.7
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 2.0e-149 532.7 331 82.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.0e-149 532.7 316 84.8
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 3.4e-149 531.9 332 79.5
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 3.4e-149 531.9 331 80.4
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.3e-148 530.0 328 82.3
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.2e-148 529.3 332 80.7
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 4.9e-148 528.1 364 76.6
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.1e-147 526.9 333 80.5
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.4e-147 524.6 332 78.9
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.6e-146 523.1 332 78.3
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 4.3e-144 515.0 329 81.5
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 5.6e-144 514.6 456 62.1
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.3e-143 513.5 328 79.3
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.4e-142 510.0 305 83.0
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.5e-141 506.5 339 77.3
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 7.1e-139 497.7 329 77.5
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.3e-139 497.3 303 84.8
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 6.0e-138 494.6 333 78.1
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.3e-137 493.4 332 78.3
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.5e-136 490.0 331 76.1
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 4.8e-135 485.0 327 78.6
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 2.0e-133 479.6 328 72.6
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 4.5e-133 478.4 336 72.0
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.9e-132 475.7 334 77.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.9e-131 473.0 378 66.9
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.1e-130 469.5 333 74.8
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 5.1e-129 464.9 327 70.3
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 4.9e-124 448.4 280 79.3
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.9e-123 446.4 324 74.7
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 7.9e-114 414.5 325 63.7
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.0e-112 409.8 234 88.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.4e-109 399.1 235 85.1
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.3e-108 397.1 319 62.1
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 8.5e-108 394.4 325 62.8
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.5e-104 383.6 230 84.8
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 2.6e-101 372.9 320 62.2
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 4.2e-99 365.5 273 70.3
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.6e-93 346.3 336 62.2
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.8e-89 333.6 240 67.9
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.0e-89 332.8 198 85.4
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 4.1e-86 322.4 334 57.5
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 1.9e-83 313.5 221 76.0
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.0e-81 307.8 221 74.2
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.2e-80 304.3 168 91.1
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.4e-78 297.4 165 89.7
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 2.7e-77 293.1 221 72.9
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 8.9e-73 278.1 333 43.5
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.9e-68 263.1 165 78.8
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.6e-66 256.1 280 56.1
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 6.8e-65 251.9 328 49.7
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 4.3e-59 232.6 135 83.0
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.7e-53 213.4 130 80.8
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.3e-43 179.5 102 85.3
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.2e-40 171.4 160 58.1
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 6.4e-39 165.6 182 54.4
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.1e-38 164.9 150 56.0
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 1.0e-36 158.3 103 76.7
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 5.1e-36 156.0 92 85.9
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.6e-34 151.0 89 80.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.4e-33 147.1 89 83.1
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.4e-30 137.1 91 80.2
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.1e-30 135.6 77 88.3
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 7.9e-29 132.1 69 84.1
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 3.3e-27 126.7 75 84.0
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.3e-26 124.8 81 77.8
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 8.1e-26 122.1 72 79.2
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.4e-25 120.6 75 76.0
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 2.9e-23 113.6 72 80.6
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 2.1e-21 107.5 67 82.1
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 6.0e-21 105.9 69 73.9
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 5.6e-19 99.4 65 78.5
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.0e-07 62.0 86 47.7
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 1.3e-07 61.6 34 82.4
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 2.2e-07 60.8 33 84.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings