Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 3.3e-65 251.5 125 100.0
Nitab4.5_0000934g0110 Nicotiana tabacum HOM05D004288 ORTHO05D004997 2.3e-50 202.2 122 87.7
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 4.5e-38 161.4 127 69.3
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 2.2e-32 142.5 126 68.3
Solyc04g078010.4 Solanum lycopersicum HOM05D004288 ORTHO05D004997 3.6e-27 125.2 120 59.2
Sopen04g031610 Solanum pennellii HOM05D004288 ORTHO05D004997 1.4e-26 123.2 113 63.7
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 4.4e-25 118.2 115 59.1
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 3.2e-23 112.1 127 59.1
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.0e-22 109.4 125 55.2
Nitab4.5_0014410g0020 Nicotiana tabacum HOM05D004288 ORTHO05D004997 6.0e-22 107.8 115 53.0
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 1.3e-21 106.7 120 55.0
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 1.3e-21 106.7 91 63.7
Peaxi162Scf00160g00120 Petunia axillaris HOM05D004288 ORTHO05D004997 3.0e-21 105.5 86 64.0
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 3.9e-21 105.1 126 54.0
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 6.6e-21 104.4 82 65.9
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 1.1e-20 103.6 124 50.8
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 1.5e-20 103.2 125 54.4
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 1.9e-20 102.8 109 52.3
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.9e-20 102.8 81 65.4
Migut.C00495 Erythranthe guttata HOM05D004288 ORTHO05D004997 9.5e-20 100.5 125 50.4
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 1.2e-19 100.1 125 55.2
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 2.8e-19 99.0 125 52.0
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 1.8e-18 96.3 69 68.1
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 2.3e-18 95.9 124 50.0
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 5.2e-18 94.7 109 50.5
SGA_v2.0_scaffold14G06935 Striga asiatica HOM05D004288 ORTHO05D004997 5.2e-18 94.7 130 45.4
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.0e-17 92.8 125 48.8
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 2.0e-17 92.8 109 47.7
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 5.8e-17 91.3 109 49.5
SalBow6G1935 Salvia bowleyana HOM05D004288 ORTHO05D004997 7.5e-17 90.9 121 45.5
SalBow8G0960 Salvia bowleyana HOM05D004288 ORTHO05D004997 7.5e-17 90.9 121 45.5
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 7.5e-17 90.9 124 50.0
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 2.2e-16 89.4 116 50.0
SalBow7G4748 Salvia bowleyana HOM05D004288 ORTHO05D004997 2.2e-16 89.4 136 45.6
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 3.7e-16 88.6 120 47.5
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 8.3e-16 87.4 109 47.7
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 1.1e-15 87.0 109 46.8
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.1e-15 87.0 107 48.6
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 1.4e-15 86.7 86 55.8
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 2.4e-15 85.9 138 45.7
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 3.2e-15 85.5 109 45.9
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 3.2e-15 85.5 109 45.9
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 5.4e-15 84.7 118 47.5
Gorai.010G024900 Gossypium raimondii HOM05D004288 ORTHO05D004997 7.0e-15 84.3 107 47.7
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 7.0e-15 84.3 122 42.6
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 9.2e-15 84.0 110 46.4
Gohir.D06G020400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 9.2e-15 84.0 107 47.7
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 9.2e-15 84.0 120 42.5
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 9.2e-15 84.0 118 44.1
MSTRG.1030 Avicennia marina HOM05D004288 ORTHO05D004997 1.2e-14 83.6 118 47.5
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 1.2e-14 83.6 122 44.3
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.6e-14 83.2 109 45.0
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.6e-14 83.2 120 44.2
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 2.1e-14 82.8 90 54.4
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 2.7e-14 82.4 82 53.7
PSO541G1266 Papaver somniferum HOM05D004288 ORTHO05D004997 3.5e-14 82.0 94 45.7
Rhsim07G0221200 Rhododendron simsii HOM05D004288 ORTHO05D004997 3.5e-14 82.0 63 63.5
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 6.0e-14 81.3 79 51.9
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 6.0e-14 81.3 73 58.9
Dinv39247 Davidia involucrata HOM05D004288 ORTHO05D004997 6.0e-14 81.3 126 46.8
MSTRG.22227 Avicennia marina HOM05D004288 ORTHO05D004997 7.8e-14 80.9 119 49.6
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 7.8e-14 80.9 110 43.6
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 1.0e-13 80.5 117 43.6
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 1.0e-13 80.5 121 42.1
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 2.3e-13 79.3 116 41.4
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 3.9e-13 78.6 81 51.9
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.9e-13 78.6 118 41.5
Sc02g0007800 Simmondsia chinensis HOM05D003189 ORTHO05D003449 1.1e-12 77.0 81 48.1
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 1.5e-12 76.6 120 44.2
Oeu059079.1 Olea europaea HOM05D004288 ORTHO05D004997 1.9e-12 76.3 125 44.8
PSO675G1665 Papaver somniferum HOM05D004288 ORTHO05D004997 1.9e-12 76.3 80 46.2
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 2.5e-12 75.9 81 49.4
Ah.05g167180 Amaranthus hybridus HOM05D004288 ORTHO05D004997 3.3e-12 75.5 117 45.3
TPR.G11815 Trifolium pratense HOM05D004288 ORTHO05D004997 5.6e-12 74.7 108 40.7
ClCG05G020460 Citrullus lanatus HOM05D004288 ORTHO05D004997 7.3e-12 74.3 84 51.2
HanXRQChr01g0027971 Helianthus annuus HOM05D004288 ORTHO05D004997 7.3e-12 74.3 54 68.5
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 7.3e-12 74.3 121 42.1
CiPaw.13G085100 Carya illinoinensis HOM05D004288 ORTHO05D004997 9.5e-12 73.9 79 49.4
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 9.5e-12 73.9 113 41.6
Lsat_1_v5_gn_4_130821 Lactuca sativa HOM05D004288 ORTHO05D004997 1.2e-11 73.6 60 65.0
THA.LOC104825767 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 1.2e-11 73.6 112 38.4
EL10As7g23804 Beta vulgaris HOM05D004288 ORTHO05D004997 1.6e-11 73.2 77 54.5
HanXRQChr09g0266571 Helianthus annuus HOM05D004288 ORTHO05D004997 2.1e-11 72.8 117 47.0
Sed0012219 Sechium edule HOM05D004288 ORTHO05D004997 2.1e-11 72.8 42 73.8
GSVIVG01037855001 Vitis vinifera HOM05D004288 ORTHO05D004997 2.1e-11 72.8 118 39.0
Zm00001eb007460 Zea mays HOM05D004288 ORTHO05D004997 2.1e-11 72.8 73 46.6
CiPaw.04G152800 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.6e-11 72.0 77 50.6
MELO3C016806.2 Cucumis melo HOM05D004288 ORTHO05D004997 3.6e-11 72.0 107 41.1
Psat6g015560 Pisum sativum HOM05D004288 ORTHO05D004997 3.6e-11 72.0 112 42.0
Migut.N02769 Erythranthe guttata HOM05D004288 ORTHO05D004997 8.1e-11 70.9 58 56.9
Lsat_1_v5_gn_6_112441 Lactuca sativa HOM05D004288 ORTHO05D004997 8.1e-11 70.9 40 80.0
ClCG05G020480 Citrullus lanatus HOM05D004288 ORTHO05D004997 1.1e-10 70.5 42 69.0
CsaV3_4G034910 Cucumis sativus L. HOM05D004288 ORTHO05D003449 1.1e-10 70.5 49 63.3
FAN15G0972 Fragaria x ananassa HOM05D004288 ORTHO05D004997 1.1e-10 70.5 50 66.0
HanXRQChr11g0341661 Helianthus annuus HOM05D004288 ORTHO05D004997 1.1e-10 70.5 58 62.1
Hund14391 Selenicereus undatus HOM05D004288 ORTHO05D004997 1.4e-10 70.1 43 74.4
COL.COLO4_28524 Corchorus olitorius HOM05D004288 ORTHO05D004997 1.8e-10 69.7 66 53.0
FAN27G1232 Fragaria x ananassa HOM05D004288 ORTHO05D004997 1.8e-10 69.7 50 66.0
RcHm_v2.0_Chr6g0309361 Rosa chinensis HOM05D004288 ORTHO05D004997 1.8e-10 69.7 54 61.1
FvH4_2g33280 Fragaria vesca HOM05D004288 ORTHO05D004997 2.3e-10 69.3 54 63.0
FAN24G2538 Fragaria x ananassa HOM05D004288 ORTHO05D004997 2.3e-10 69.3 54 63.0
Psat6g016040 Pisum sativum HOM05D004288 ORTHO05D004997 3.1e-10 68.9 115 39.1
MELO3C032376.2 Cucumis melo HOM05D004288 ORTHO05D004997 5.2e-10 68.2 42 66.7
ECA232G2356 Erigeron canadensis HOM05D004288 ORTHO05D004997 5.2e-10 68.2 118 41.5
THA.LOC104801605 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 5.2e-10 68.2 43 67.4
TAR636G2516 Trochodendron aralioides HOM05D004288 ORTHO05D004997 8.9e-10 67.4 53 64.2
unitig_8.g4880 Utricularia gibba HOM05D004288 ORTHO05D004997 8.9e-10 67.4 59 55.9
Medtr1g018470 Medicago truncatula HOM05D004288 ORTHO05D004997 1.2e-09 67.0 117 46.2
Medtr1g418505 Medicago truncatula HOM05D004288 ORTHO05D004997 1.2e-09 67.0 117 46.2
Sed0005367 Sechium edule HOM05D004288 ORTHO05D004997 1.2e-09 67.0 42 66.7
CDE04G1463 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 1.5e-09 66.6 70 50.0
DCAR_008852 Daucus carota HOM05D004288 ORTHO05D004997 1.5e-09 66.6 86 47.7
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 1.5e-09 66.6 80 48.8
Os03g0206201 Oryza sativa ssp. japonica HOM05D004288 ORTHO05D004997 2.6e-09 65.9 53 50.9
TPR.G3776 Trifolium pratense HOM05D004288 ORTHO05D004997 2.6e-09 65.9 64 51.6
AT5G01075 Arabidopsis thaliana HOM05D004288 ORTHO05D004997 3.4e-09 65.5 48 64.6
CANSAT54G1812 Cannabis sativa HOM05D004288 ORTHO05D004997 3.4e-09 65.5 106 35.8
FAN20G2816 Fragaria x ananassa HOM05D004288 ORTHO05D004997 3.4e-09 65.5 50 62.0
Lj3g0011225 Lotus japonicus HOM05D004288 ORTHO05D004997 3.4e-09 65.5 113 38.9
DCAR_020077 Daucus carota HOM05D004288 ORTHO05D004997 4.4e-09 65.1 65 50.8
CDE06G1799 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 5.8e-09 64.7 58 55.2
AL6G11150 Arabidopsis lyrata HOM05D004288 ORTHO05D004997 2.9e-08 62.4 40 65.0
ECA246G3669 Erigeron canadensis HOM05D002841 ORTHO05D003158 3.7e-08 62.0 42 64.3
PGR031G3267 Punica granatum HOM05D004288 ORTHO05D004997 3.7e-08 62.0 67 47.8
Ciclev10029597m.g Citrus clementina HOM05D004288 ORTHO05D004997 4.9e-08 61.6 114 41.2
Lalb_Chr11g0062841 Lupinus albus HOM05D004288 ORTHO05D004997 4.9e-08 61.6 111 36.0
Phvul.001G026400 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 4.9e-08 61.6 109 33.9
Sed0026714 Sechium edule HOM05D004288 ORTHO05D004997 4.9e-08 61.6 52 53.8
Carub.0006s0080 Capsella rubella HOM05D004288 ORTHO05D004997 6.4e-08 61.2 46 63.0
AUR62024063 Chenopodium quinoa HOM05D004288 ORTHO05D004997 6.4e-08 61.2 70 48.6
Sp6g40470 Schrenkiella parvula HOM05D004288 ORTHO05D004997 8.3e-08 60.8 40 65.0
SGA_v2.0_scaffold238G43969 Striga asiatica HOM05D004288 ORTHO05D004997 8.3e-08 60.8 115 38.3
AUR62024064 Chenopodium quinoa HOM05D004288 ORTHO05D004997 1.1e-07 60.5 65 53.8
Nn1g04602 Nelumbo nucifera HOM05D004288 ORTHO05D004997 1.1e-07 60.5 65 46.2
Aqoxy5G00895 Aquilegia oxysepala HOM05D003189 ORTHO05D003449 1.4e-07 60.1 55 56.4
TAR381G1169 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.4e-07 60.1 73 46.6
AUR62029595 Chenopodium quinoa HOM05D004288 ORTHO05D004997 2.4e-07 59.3 64 53.1
AUR62041737 Chenopodium quinoa HOM05D004288 ORTHO05D004997 3.2e-07 58.9 71 49.3
Thhalv10015166m.g Eutrema salsugineum HOM05D004288 ORTHO05D004997 3.2e-07 58.9 45 62.2
BcaNung02758 Brassica carinata HOM05D004288 ORTHO05D004997 7.1e-07 57.8 41 63.4
BolC9t60183H Brassica oleracea HOM05D004288 ORTHO05D004997 7.1e-07 57.8 41 63.4
VMungo0647G1736 Vigna mungo HOM05D004288 ORTHO05D004997 9.2e-07 57.4 64 48.4
VMungo0647G1919 Vigna mungo HOM05D004288 ORTHO05D004997 9.2e-07 57.4 66 47.0
C09p74500 Brassica napus HOM05D004288 ORTHO05D004997 2.1e-06 56.2 48 56.2
BcaNung06280 Brassica carinata HOM05D004288 ORTHO05D004997 2.7e-06 55.8 42 61.9
Lj1g0008863 Lotus japonicus HOM05D004288 ORTHO05D004997 3.5e-06 55.5 119 38.7
HPP92_013399 Vanilla planifolia HOM05D059585 ORTHO05D004997 6.0e-06 54.7 116 35.3
VMungo0647G1883 Vigna mungo HOM05D004288 ORTHO05D004997 6.0e-06 54.7 111 36.0
BcaC03g13064 Brassica carinata HOM05D004288 ORTHO05D004997 7.8e-06 54.3 45 60.0
BcaNung04465 Brassica carinata HOM05D004288 ORTHO05D004997 7.8e-06 54.3 41 61.0
A10p33580 Brassica napus HOM05D004288 ORTHO05D004997 7.8e-06 54.3 41 61.0
C02p00310 Brassica napus HOM05D004288 ORTHO05D004997 7.8e-06 54.3 45 60.0
BraA10t45389Z Brassica rapa HOM05D004288 ORTHO05D004997 7.8e-06 54.3 41 61.0
CDE04G1843 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 7.8e-06 54.3 46 50.0
PGR083G0410 Punica granatum HOM05D004288 ORTHO05D004997 7.8e-06 54.3 59 49.2

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (3 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (5 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (2 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (3 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (3 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings