Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 3.9e-188 661.4 352 100.0
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.6e-117 426.8 324 67.0
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 4.0e-116 422.2 330 66.1
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 3.4e-115 419.1 324 66.4
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.3e-114 417.2 327 65.7
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.3e-114 417.2 327 65.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.9e-114 416.0 330 65.5
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 4.9e-114 415.2 330 63.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.1e-113 414.1 330 64.5
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 2.4e-113 412.9 330 65.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 3.2e-113 412.5 330 63.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 7.1e-113 411.4 324 64.8
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 9.3e-113 411.0 329 63.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.2e-112 410.6 324 65.1
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.6e-112 410.2 330 64.2
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.6e-112 410.2 330 63.9
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.1e-112 409.8 326 65.3
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.1e-112 409.8 330 63.9
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 3.5e-112 409.1 327 63.6
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.5e-112 409.1 324 65.1
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 3.5e-112 409.1 330 63.9
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 4.6e-112 408.7 324 64.8
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 7.8e-112 407.9 333 62.5
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.8e-112 407.9 324 64.8
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.3e-111 407.1 324 65.4
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.3e-111 407.1 330 63.3
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.7e-111 406.8 324 64.5
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 1.7e-111 406.8 324 63.9
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 1.7e-111 406.8 330 63.9
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 3.0e-111 406.0 330 63.3
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 3.0e-111 406.0 330 63.3
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 3.0e-111 406.0 329 62.9
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 3.9e-111 405.6 330 62.7
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.9e-111 405.6 324 63.6
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.9e-111 405.6 324 63.6
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.1e-111 405.2 324 63.6
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 5.1e-111 405.2 330 63.3
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 5.1e-111 405.2 324 64.2
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 8.7e-111 404.4 330 61.8
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.1e-110 404.1 331 63.1
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.1e-110 404.1 331 62.8
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.5e-110 402.9 330 62.7
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 3.3e-110 402.5 330 62.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 3.3e-110 402.5 324 63.3
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.3e-110 402.5 331 62.5
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 4.3e-110 402.1 330 62.1
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 4.3e-110 402.1 336 62.8
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 4.3e-110 402.1 330 62.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 5.6e-110 401.7 326 63.5
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 5.6e-110 401.7 330 62.1
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 5.6e-110 401.7 330 62.1
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 5.6e-110 401.7 330 62.1
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 5.6e-110 401.7 330 62.1
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.6e-110 401.7 331 62.5
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 9.6e-110 401.0 330 62.1
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 9.6e-110 401.0 326 63.8
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.3e-109 400.6 330 61.8
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.3e-109 400.6 330 62.7
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.3e-109 400.6 329 62.6
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.3e-109 400.6 326 63.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.6e-109 400.2 327 62.7
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 1.6e-109 400.2 330 61.5
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.1e-109 399.8 324 63.6
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.8e-109 399.4 329 62.3
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.8e-109 399.4 330 63.6
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.8e-109 399.4 330 61.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.8e-109 399.4 316 63.9
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 3.6e-109 399.1 324 62.7
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.8e-109 398.7 324 62.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 4.8e-109 398.7 325 63.4
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 6.2e-109 398.3 324 62.0
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.2e-109 398.3 324 63.0
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.1e-109 397.9 330 62.7
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 8.1e-109 397.9 324 63.3
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.1e-108 397.5 326 62.3
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.4e-108 397.1 330 61.2
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.4e-108 397.1 327 62.7
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.8e-108 396.7 321 63.2
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.4e-108 396.4 324 63.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.4e-108 396.4 325 63.1
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.1e-108 396.0 330 60.9
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 4.0e-108 395.6 324 62.3
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 4.0e-108 395.6 329 62.3
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 4.0e-108 395.6 330 62.1
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 6.9e-108 394.8 365 58.6
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 6.9e-108 394.8 329 61.7
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 9.0e-108 394.4 325 62.8
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.2e-107 394.0 329 62.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.5e-107 393.7 330 61.5
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.4e-107 392.5 330 62.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 5.8e-107 391.7 330 60.9
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 2.2e-106 389.8 330 61.2
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.9e-106 389.4 330 60.3
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 8.4e-106 387.9 324 60.8
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.9e-105 386.7 330 60.9
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.9e-105 386.7 357 57.1
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.4e-105 386.3 330 61.2
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 3.2e-105 386.0 331 61.0
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.3e-105 384.4 307 65.1
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.6e-104 383.6 378 56.1
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 2.7e-104 382.9 284 67.3
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-103 380.6 330 59.7
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.3e-103 379.8 324 60.2
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 6.6e-103 378.3 324 61.4
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.6e-101 373.6 330 59.1
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 9.9e-99 364.4 336 59.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.7e-96 356.3 273 65.2
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.8e-93 345.5 330 57.9
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.0e-91 340.1 324 57.1
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.4e-91 339.3 305 59.7
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.4e-91 339.3 283 62.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.4e-90 334.7 376 51.3
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 1.9e-89 333.6 330 54.8
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.9e-87 325.9 325 55.4
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.6e-85 320.5 325 54.5
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.4e-81 307.4 350 47.7
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 9.3e-81 304.7 329 52.9
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.5e-78 296.6 228 64.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.1e-76 291.2 229 64.2
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 7.7e-67 258.5 196 66.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.1e-65 254.6 275 50.5
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.1e-65 254.6 238 54.6
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 3.6e-64 249.6 320 44.7
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 5.7e-62 242.3 223 60.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.7e-61 240.7 158 74.7
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-60 237.7 223 59.6
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.2e-59 234.6 335 46.6
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.6e-59 233.4 226 55.8
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 3.8e-58 229.6 223 58.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.7e-51 206.8 334 41.0
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 7.2e-49 198.7 263 46.8
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.4e-44 183.7 168 58.3
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.9e-41 174.1 171 54.4
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.7e-35 153.7 146 55.5
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.7e-34 151.0 330 35.2
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.2e-29 134.0 127 55.9
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 3.7e-29 133.3 169 49.1
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 3.0e-26 123.6 172 39.0
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 7.3e-25 119.0 114 56.1
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-24 118.2 106 56.6
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.8e-23 114.4 88 62.5
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 7.5e-22 109.0 67 73.1
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 9.8e-22 108.6 81 63.0
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 2.9e-21 107.1 80 65.0
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 4.3e-17 93.2 168 38.1
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 4.3e-17 93.2 75 56.0
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 7.3e-17 92.4 95 52.6
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.5e-17 92.0 65 64.6
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.1e-16 90.9 94 52.1
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 4.7e-16 89.7 69 62.3
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 8.1e-16 89.0 64 62.5
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.1e-15 88.6 69 63.8
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.4e-14 83.2 83 53.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (5 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (6 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings