Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.4e-190 669.5 346 100.0
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.1e-170 602.4 325 94.8
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.4e-169 599.7 325 94.8
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.8e-169 599.4 325 93.5
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 2.4e-169 599.0 325 94.2
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 5.2e-169 597.8 325 93.2
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 2.6e-168 595.5 325 94.2
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 5.8e-168 594.3 325 92.6
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 9.9e-168 593.6 325 93.2
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.8e-167 591.7 325 93.2
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 3.8e-167 591.7 325 93.2
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.9e-166 589.3 325 92.9
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.9e-166 589.3 325 92.9
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.9e-166 589.3 325 92.3
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 3.2e-166 588.6 325 92.3
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 4.2e-166 588.2 325 92.0
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 4.2e-166 588.2 328 91.5
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 7.1e-166 587.4 325 92.0
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.1e-166 587.4 325 92.3
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.6e-165 586.3 325 92.3
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 2.1e-165 585.9 326 92.3
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.1e-165 585.9 325 92.0
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.3e-164 583.2 325 92.0
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 7.3e-163 577.4 325 90.5
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.6e-163 577.0 325 90.2
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.1e-162 575.9 325 89.8
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 4.8e-162 574.7 325 90.2
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.2e-162 574.3 325 89.8
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 2.4e-161 572.4 324 90.7
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.1e-161 572.0 325 89.5
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 4.0e-161 571.6 325 88.6
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 6.9e-161 570.9 325 90.2
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 6.9e-161 570.9 325 88.3
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.2e-160 570.1 325 88.6
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.2e-160 570.1 325 88.6
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.0e-160 569.3 331 89.1
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.0e-160 569.3 325 90.2
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.6e-160 568.9 325 88.3
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 5.8e-160 567.8 325 90.5
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 5.8e-160 567.8 325 89.8
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 7.6e-160 567.4 325 88.0
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 7.6e-160 567.4 325 90.2
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 7.6e-160 567.4 325 89.2
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 7.6e-160 567.4 324 89.5
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 7.6e-160 567.4 326 89.3
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 9.9e-160 567.0 363 82.9
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.7e-159 566.2 325 87.1
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 2.2e-159 565.8 325 88.0
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 2.2e-159 565.8 325 89.5
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 2.2e-159 565.8 325 89.5
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 2.2e-159 565.8 325 88.0
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.9e-159 565.5 325 87.1
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.9e-159 565.5 325 87.4
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.9e-159 565.5 325 88.0
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 3.8e-159 565.1 325 88.0
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.8e-159 565.1 325 87.7
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.9e-159 564.7 325 88.9
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 4.9e-159 564.7 325 88.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 6.4e-159 564.3 325 87.7
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.1e-158 563.5 331 88.5
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.1e-158 563.5 324 88.6
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.4e-158 563.1 325 88.9
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 1.9e-158 562.8 325 87.4
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 1.9e-158 562.8 325 87.4
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 1.9e-158 562.8 325 87.4
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 1.9e-158 562.8 325 87.4
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.9e-158 562.8 326 89.6
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.9e-158 562.8 338 84.0
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 2.4e-158 562.4 325 87.4
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 4.2e-158 561.6 325 87.4
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 4.2e-158 561.6 325 87.7
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.2e-157 560.1 326 86.5
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 2.7e-157 558.9 325 86.8
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.5e-157 558.5 325 86.8
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 3.5e-157 558.5 379 78.9
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 4.6e-157 558.1 325 89.5
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 6.0e-157 557.8 325 86.5
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 6.0e-157 557.8 325 86.5
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.0e-156 557.0 325 88.3
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.0e-156 557.0 325 87.1
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.0e-156 557.0 325 86.2
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 1.8e-156 556.2 325 86.2
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 3.0e-156 555.4 352 81.8
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 3.3e-155 552.0 326 85.6
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 9.6e-155 550.4 314 87.6
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.3e-154 550.1 325 86.5
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.8e-154 548.1 326 85.3
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 3.1e-153 545.4 327 84.1
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 9.0e-153 543.9 325 84.9
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.5e-152 543.1 449 67.5
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-151 540.0 325 84.9
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.7e-151 539.7 325 84.9
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 8.4e-151 537.3 327 83.5
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.4e-150 535.8 327 83.2
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 6.0e-149 531.2 326 84.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 8.7e-148 527.3 302 88.7
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 6.2e-146 521.2 300 87.3
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 1.8e-145 519.6 326 85.3
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.6e-144 514.2 325 82.5
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.3e-143 513.5 325 81.8
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.7e-143 513.1 339 78.8
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 3.2e-142 508.8 325 80.6
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 3.7e-138 495.4 330 76.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.4e-137 493.4 325 76.3
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 4.1e-137 491.9 324 81.5
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.5e-136 490.0 301 85.4
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.9e-136 488.0 371 72.0
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.8e-135 485.3 325 79.4
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 3.6e-133 478.8 325 74.5
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.9e-131 473.0 326 77.3
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.3e-131 472.2 284 83.5
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.4e-128 462.2 330 75.8
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 6.5e-119 431.4 323 71.2
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 7.4e-115 417.9 234 90.6
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.7e-111 406.8 318 64.5
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 8.5e-111 404.4 324 65.1
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.1e-110 404.1 324 60.5
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.4e-110 401.0 233 87.1
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 2.7e-104 382.9 270 74.4
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 7.7e-104 381.3 317 65.6
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 5.9e-96 355.1 197 93.4
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.7e-96 354.8 332 64.5
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.2e-91 340.9 331 61.0
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.7e-90 337.0 234 71.8
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 7.0e-89 331.6 220 81.4
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.7e-88 329.7 221 76.9
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 3.8e-87 325.9 220 79.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 2.0e-83 313.5 167 94.0
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.3e-82 310.8 220 77.7
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.5e-75 287.3 333 45.3
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 5.1e-71 272.3 158 88.0
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 7.3e-70 268.5 325 52.9
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.1e-68 263.1 158 82.9
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 6.8e-68 261.9 267 57.3
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 6.2e-61 238.8 129 91.5
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 6.0e-56 222.2 128 87.5
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 6.9e-44 182.2 158 64.6
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 6.9e-44 182.2 196 53.1
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.9e-43 178.3 97 88.7
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 9.3e-41 171.8 205 52.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 2.8e-37 160.2 103 80.6
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 4.0e-36 156.4 85 92.9
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 5.8e-35 152.5 89 83.1
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 3.5e-32 143.3 88 79.5
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.6e-32 142.9 77 92.2
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 7.4e-30 135.6 84 86.9
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.3e-29 134.8 80 81.2
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 1.3e-29 134.8 69 89.9
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 3.7e-29 133.3 74 87.8
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 2.2e-26 124.0 91 70.3
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.5e-24 116.7 75 76.0
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 5.1e-23 112.8 72 80.6
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 5.7e-22 109.4 69 78.3
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 4.8e-21 106.3 60 90.0
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 3.8e-18 96.7 58 86.2
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.7e-10 71.2 85 50.6
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 6.1e-08 62.8 76 47.4
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 6.1e-08 62.8 33 87.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings