Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014791.2 Cucumis melo HOM05D006554 ORTHO05D008778 8.9e-148 526.9 270 100.0
CsaV3_3G027590 Cucumis sativus L. HOM05D006554 ORTHO05D008778 5.2e-132 474.6 270 91.9
ClCG05G012880 Citrullus lanatus HOM05D006554 ORTHO05D008778 2.6e-115 419.1 271 81.2
Sed0003688 Sechium edule HOM05D006554 ORTHO05D008778 2.7e-96 355.9 271 71.6
TPR.G1120 Trifolium pratense HOM05D006554 ORTHO05D008778 2.7e-51 206.5 296 45.3
Glyma.19G079100 Glycine max HOM05D006554 ORTHO05D008778 8.5e-50 201.4 294 41.5
Glyma.16G067800 Glycine max HOM05D006554 ORTHO05D008778 2.5e-49 199.9 294 40.8
Lalb_Chr22g0360641 Lupinus albus HOM05D006554 ORTHO05D008778 8.8e-47 191.4 275 42.2
Medtr7g032890 Medicago truncatula HOM05D006554 ORTHO05D008778 1.2e-46 191.0 284 42.6
Prupe.3G295900 Prunus persica HOM05D006554 ORTHO05D008778 3.4e-46 189.5 307 41.0
Phvul.008G147100 Phaseolus vulgaris HOM05D006554 ORTHO05D008778 4.4e-46 189.1 292 40.1
RcHm_v2.0_Chr2g0173581 Rosa chinensis HOM05D006554 ORTHO05D008778 1.3e-45 187.6 286 40.6
MD09G1020300 Malus domestica HOM05D006554 ORTHO05D008778 4.9e-45 185.7 307 39.7
arahy.Tifrunner.gnm1.ann1.1L0SFZ Arachis hypogaea HOM05D006554 ORTHO05D008778 1.8e-44 183.7 332 37.7
Duzib147G0564 Durio zibethinus HOM05D006554 ORTHO05D008778 3.1e-44 183.0 282 41.1
QL02p073734 Quercus lobata HOM05D006554 ORTHO05D008778 4.1e-44 182.6 273 42.9
Haze_14775 Corylus avellana HOM05D006554 ORTHO05D008778 9.1e-44 181.4 293 41.6
Gohir.D04G059400 Gossypium hirsutum HOM05D006554 ORTHO05D008778 2.0e-43 180.3 288 41.7
Gorai.012G066100 Gossypium raimondii HOM05D006554 ORTHO05D008778 2.0e-43 180.3 288 41.7
Gohir.A05G353700 Gossypium hirsutum HOM05D006554 ORTHO05D008778 4.5e-43 179.1 289 41.9
Cfa007322 Carpinus fangiana HOM05D006554 ORTHO05D008778 5.9e-43 178.7 293 40.6
vmacro05891 Vaccinium macrocarpon HOM05D006554 ORTHO05D008778 5.9e-43 178.7 310 40.0
Dinv33413 Davidia involucrata HOM05D006554 ORTHO05D008778 1.7e-42 177.2 353 36.3
Lj1g0005465 Lotus japonicus HOM05D006554 ORTHO05D008778 2.3e-42 176.8 277 41.2
FAN14G0519 Fragaria x ananassa HOM05D006554 ORTHO05D008778 5.0e-42 175.6 276 41.7
Potri.003G101100 Populus trichocarpa HOM05D006554 ORTHO05D008778 1.9e-41 173.7 271 39.9
Prupe.3G207500 Prunus persica HOM05D006554 ORTHO05D008778 3.3e-41 172.9 286 42.0
Cc07_g00120 Coffea canephora HOM05D006554 ORTHO05D008778 5.6e-41 172.2 289 37.4
FAN05G3817 Fragaria x ananassa HOM05D006554 ORTHO05D008778 7.2e-41 171.8 276 41.7
Hma1.2p1_0279F.1_g111960 Hydrangea macrophylla HOM05D006554 ORTHO05D008778 7.2e-41 171.8 224 45.5
RhsimUnG0087800 Rhododendron simsii HOM05D006554 ORTHO05D008778 2.1e-40 170.2 279 41.6
TAR629G0722 Trochodendron aralioides HOM05D006554 ORTHO05D008778 4.7e-40 169.1 376 33.8
CiPaw.04G030700 Carya illinoinensis HOM05D006554 ORTHO05D008778 6.1e-40 168.7 279 39.4
Manes.15G153200 Manihot esculenta HOM05D006554 ORTHO05D008778 8.0e-40 168.3 314 36.6
FvH4_6g52060 Fragaria vesca HOM05D006554 ORTHO05D008778 1.2e-38 164.5 272 39.7
Nn4g22538 Nelumbo nucifera HOM05D006554 ORTHO05D008778 2.0e-38 163.7 292 35.3
Peaxi162Scf00080g01410 Petunia axillaris HOM05D006554 ORTHO05D008778 2.6e-38 163.3 317 35.3
MSTRG.3126 Avicennia marina HOM05D006554 ORTHO05D008778 1.3e-37 161.0 306 34.6
GSVIVG01032362001 Vitis vinifera HOM05D006554 ORTHO05D008778 1.7e-37 160.6 357 33.1
FAN14G5462 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.9e-37 159.8 314 36.3
RhsimUnG0005800 Rhododendron simsii HOM05D006554 ORTHO05D008778 4.9e-37 159.1 280 40.0
FAN09G2431 Fragaria x ananassa HOM05D006554 ORTHO05D008778 8.3e-37 158.3 269 41.3
Sopen02g017020 Solanum pennellii HOM05D006554 ORTHO05D008778 8.3e-37 158.3 320 36.2
Solyc02g067900.3 Solanum lycopersicum HOM05D006554 ORTHO05D008778 1.1e-36 157.9 314 36.0
Nitab4.5_0000040g0640 Nicotiana tabacum HOM05D006554 ORTHO05D008778 1.8e-36 157.1 322 36.6
Nitab4.5_0004496g0080 Nicotiana tabacum HOM05D006554 ORTHO05D008778 2.4e-36 156.8 322 36.0
FAN02G3632 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.6e-35 154.1 271 41.0
PGSC0003DMG400006964 Solanum tuberosum HOM05D006554 ORTHO05D008778 2.0e-35 153.7 319 34.8
Oeu050455.2 Olea europaea HOM05D006554 ORTHO05D008778 4.6e-35 152.5 353 34.8
Ah.03g136830 Amaranthus hybridus HOM05D003292 ORTHO05D004237 1.5e-33 147.5 276 35.1
Migut.H00036 Erythranthe guttata HOM05D006554 ORTHO05D008778 2.5e-33 146.7 333 31.8
Ciclev10015858m.g Citrus clementina HOM05D006554 ORTHO05D008778 5.6e-33 145.6 335 33.4
PGR083G2647 Punica granatum HOM05D006554 ORTHO05D008778 7.3e-33 145.2 266 36.8
CANSAT64G1839 Cannabis sativa HOM05D006554 ORTHO05D008778 1.2e-32 144.4 321 33.0
Eucgr.J02264 Eucalyptus grandis HOM05D006554 ORTHO05D008778 1.6e-32 144.1 364 29.9
SGA_v2.0_scaffold135G34926 Striga asiatica HOM05D006554 ORTHO05D008778 4.7e-32 142.5 297 32.7
Sabra03G0068900 Salix brachista HOM05D006554 ORTHO05D008778 1.0e-31 141.4 309 33.0
AUR62028440 Chenopodium quinoa HOM05D006554 ORTHO05D008778 1.8e-31 140.6 296 33.4
SalBow1G4569 Salvia bowleyana HOM05D006554 ORTHO05D008778 1.8e-31 140.6 281 33.5
Lsat_1_v5_gn_0_6020 Lactuca sativa HOM05D006554 ORTHO05D008778 2.6e-30 136.7 330 32.1
Sp7g01270 Schrenkiella parvula HOM05D006554 ORTHO05D008778 4.4e-30 136.0 260 34.2
Actinidia05967 Actinidia chinensis HOM05D006554 ORTHO05D008778 1.7e-29 134.0 313 32.3
unitig_52.g17657 Utricularia gibba HOM05D006554 ORTHO05D008778 3.7e-29 132.9 250 37.2
EL10Ac5g11640 Beta vulgaris HOM05D006554 ORTHO05D008778 4.9e-29 132.5 308 33.1
A04p13620 Brassica napus HOM05D004424 ORTHO05D005476 4.9e-29 132.5 262 34.4
BraA04t17023Z Brassica rapa HOM05D004424 ORTHO05D005476 4.9e-29 132.5 262 34.4
Thecc.04G022100 Theobroma cacao HOM05D006554 ORTHO05D008778 2.4e-28 130.2 185 42.2
AL7G49210 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 7.0e-28 128.6 264 34.5
Hund23035 Selenicereus undatus HOM05D006554 ORTHO05D008778 1.6e-27 127.5 261 35.2
BolC4t26342H Brassica oleracea HOM05D006554 ORTHO05D008778 2.0e-27 127.1 262 33.2
Carub.0007s3489 Capsella rubella HOM05D006554 ORTHO05D008778 2.0e-27 127.1 271 32.8
C04p47410 Brassica napus HOM05D004424 ORTHO05D005476 1.7e-26 124.0 262 32.8
AL5G16780 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 1.5e-25 120.9 263 33.8
Carub.0005s0577 Capsella rubella HOM05D006554 ORTHO05D008778 1.5e-25 120.9 253 33.6
CARHR261360 Cardamine hirsuta HOM05D006554 ORTHO05D008778 3.3e-25 119.8 260 32.7
ECA246G2886 Erigeron canadensis HOM05D006554 ORTHO05D008778 5.6e-25 119.0 294 31.3
AT5G40600 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 7.3e-25 118.6 269 31.6
Psat7g108920 Pisum sativum HOM05D006554 ORTHO05D008778 4.7e-24 115.9 209 38.3
Aa31LG9G1020 Aethionema arabicum HOM05D006554 ORTHO05D008778 1.4e-23 114.4 262 32.1
Aqoxy5G03668 Aquilegia oxysepala HOM05D006554 ORTHO05D008778 1.8e-23 114.0 121 45.5
Sp2g16620 Schrenkiella parvula HOM05D006554 ORTHO05D008778 5.2e-23 112.5 254 34.3
BolC4t27196H Brassica oleracea HOM05D006554 ORTHO05D008778 1.2e-22 111.3 247 32.4
AT3G27420 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 2.6e-22 110.2 249 33.3
Thhalv10027933m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 3.4e-22 109.8 260 29.6
A02p35470 Brassica napus HOM05D006554 ORTHO05D017433 5.8e-22 109.0 253 36.0
CSS0050446 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 5.8e-22 109.0 117 48.7
PSO541G1758 Papaver somniferum HOM05D006554 ORTHO05D008778 9.8e-22 108.2 289 31.1
Atru.chr6.2449 Acer truncatum HOM05D006554 ORTHO05D008778 1.3e-21 107.8 100 53.0
CARHR148770 Cardamine hirsuta HOM05D006554 ORTHO05D008778 1.3e-21 107.8 253 31.2
PSO675G3751 Papaver somniferum HOM05D006554 ORTHO05D008778 1.7e-21 107.5 288 30.6
BolC2t11482H Brassica oleracea HOM05D006554 ORTHO05D008778 2.2e-21 107.1 254 33.5
BraA02t08548Z Brassica rapa HOM05D006554 ORTHO05D017433 4.9e-21 105.9 253 34.8
ATR0199G021 Amborella trichopoda HOM05D006554 ORTHO05D008778 1.1e-20 104.8 292 29.5
BcaC03g17463 Brassica carinata HOM05D006554 ORTHO05D017433 1.1e-20 104.8 254 33.9
C02p54190 Brassica napus HOM05D006554 ORTHO05D008778 2.4e-20 103.6 254 33.9
VMungo1383G1633 Vigna mungo HOM05D006554 ORTHO05D008778 1.6e-19 100.9 104 48.1
Thhalv10004828m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 5.1e-18 95.9 253 32.0
BcaB06g27536 Brassica carinata HOM05D006554 ORTHO05D008778 9.5e-17 91.7 124 37.9
BcaB07g30158 Brassica carinata HOM05D006554 ORTHO05D008778 1.6e-16 90.9 124 44.4
HPP92_003738 Vanilla planifolia HOM05D006554 ORTHO05D008778 3.1e-15 86.7 266 28.9
CSS0049853 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 2.9e-13 80.1 73 53.4
CDE02G2727 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 2.4e-12 77.0 120 40.0
Eucgr.L02321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 3.2e-12 76.6 64 60.9
CDE09G0234 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 4.1e-12 76.3 147 34.7
Eucgr.C03321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 5.4e-12 75.9 64 60.9
Ca_06565_v3 Cicer arietinum L. HOM05D006554 ORTHO05D008778 1.2e-11 74.7 154 37.7
DCAR_002966 Daucus carota HOM05D006554 ORTHO05D008778 2.1e-11 73.9 198 30.3
COL.COLO4_29198 Corchorus olitorius HOM05D006554 ORTHO05D008778 2.7e-11 73.6 194 30.4
Eucgr.F01485 Eucalyptus grandis HOM05D006554 ORTHO05D008778 6.0e-11 72.4 77 50.6
VMungo1383G3169 Vigna mungo HOM05D006554 ORTHO05D008778 1.3e-10 71.2 153 34.0
Cpa.g.sc130.63 Carica papaya HOM05D006554 ORTHO05D008778 1.7e-10 70.9 121 33.1
FAN09G3965 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.5e-09 67.0 140 37.1
Atru.chr6.2450 Acer truncatum HOM05D006554 ORTHO05D008778 3.3e-09 66.6 139 40.3
SEGI_16878 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 3.3e-09 66.6 112 36.6
CDE09G1186 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 7.3e-09 65.5 146 31.5
SHI53794 Sapria himalayana HOM05D006554 ORTHO05D008778 9.6e-09 65.1 98 35.7
Lj7A603G61 Lonicera japonica HOM05D006554 ORTHO05D008778 1.2e-08 64.7 162 32.1
MBI02_g34318_MAGBIO Magnolia biondii HOM05D000336 ORTHO05D002705 4.7e-08 62.8 116 31.9
Sed0016055 Sechium edule HOM05D000336 ORTHO05D002705 3.1e-07 60.1 102 33.3
arahy.Tifrunner.gnm1.ann1.90FR5C Arachis hypogaea HOM05D000336 ORTHO05D002705 4.0e-07 59.7 98 33.7
arahy.Tifrunner.gnm1.ann1.AFBY4F Arachis hypogaea HOM05D000336 ORTHO05D002705 4.0e-07 59.7 98 33.7
Sc03g0007220 Simmondsia chinensis HOM05D006554 ORTHO05D008778 4.0e-07 59.7 154 33.1
MELO3C002885.2 Cucumis melo HOM05D000336 ORTHO05D002705 8.9e-07 58.5 124 31.5
CsaV3_5G025830 Cucumis sativus L. HOM05D000336 ORTHO05D002705 8.9e-07 58.5 124 31.5
TAR633G1495 Trochodendron aralioides HOM05D000336 ORTHO05D002705 8.9e-07 58.5 100 33.0
ClCG09G020540 Citrullus lanatus HOM05D000336 ORTHO05D002705 1.2e-06 58.2 124 30.6
Phvul.004G074600 Phaseolus vulgaris HOM05D000336 ORTHO05D002705 2.0e-06 57.4 101 33.7
Potri.001G073800 Populus trichocarpa HOM05D000336 ORTHO05D002705 2.0e-06 57.4 97 29.9
Duzib106G1105 Durio zibethinus HOM05D000336 ORTHO05D002705 2.6e-06 57.0 106 32.1
Glyma.17G182700 Glycine max HOM05D000336 ORTHO05D002705 2.6e-06 57.0 101 32.7
MSTRG.4151 Avicennia marina HOM05D000336 ORTHO05D002705 3.4e-06 56.6 121 30.6
Manes.07G103100 Manihot esculenta HOM05D000336 ORTHO05D002705 3.4e-06 56.6 169 28.4
CBR_g49972 Chara braunii HOM05D000336 ORTHO05D002705 4.4e-06 56.2 87 31.0
Lsat_1_v5_gn_1_75080 Lactuca sativa HOM05D000336 ORTHO05D002705 5.8e-06 55.8 92 30.4
Pp3c18_15420 Physcomitrium patens HOM05D000336 ORTHO05D002705 5.8e-06 55.8 133 28.6
Ca_22535_v3 Cicer arietinum L. HOM05D000336 ORTHO05D002705 7.6e-06 55.5 166 29.5
Lj2g0014987 Lotus japonicus HOM05D000336 ORTHO05D002705 7.6e-06 55.5 92 31.5
Medtr6g033375 Medicago truncatula HOM05D000336 ORTHO05D002705 7.6e-06 55.5 105 31.4
PSO384G0900 Papaver somniferum HOM05D000336 ORTHO05D002705 7.6e-06 55.5 108 32.4
Psat4g111960 Pisum sativum HOM05D000336 ORTHO05D002705 7.6e-06 55.5 167 28.1
Potri.008G043000 Populus trichocarpa HOM05D000336 ORTHO05D002705 7.6e-06 55.5 103 31.1
GSVIVG01034328001 Vitis vinifera HOM05D000336 ORTHO05D002705 7.6e-06 55.5 105 31.4
Aqoxy2G01232 Aquilegia oxysepala HOM05D000336 ORTHO05D002705 9.9e-06 55.1 98 27.6

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (4 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (2 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (2 genes)
Zea mays (0 genes)

Program Settings