Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0353001 Helianthus annuus HOM05D004730 ORTHO05D005705 1.5e-286 988.8 492 100.0
Lsat_1_v5_gn_3_139961 Lactuca sativa HOM05D004730 ORTHO05D005705 4.0e-239 831.2 529 81.9
ECA248G0182 Erigeron canadensis HOM05D004730 ORTHO05D005705 2.7e-235 818.5 509 84.5
DCAR_005384 Daucus carota HOM05D004730 ORTHO05D005705 3.3e-225 785.0 524 77.5
vmacro13156 Vaccinium macrocarpon HOM05D004730 ORTHO05D005705 2.9e-221 771.9 515 78.1
Nitab4.5_0000258g0150 Nicotiana tabacum HOM05D004730 ORTHO05D005705 4.2e-220 768.1 517 77.8
Rhsim07G0004700 Rhododendron simsii HOM05D004730 ORTHO05D005705 1.0e-218 763.5 507 78.5
Sopen05g028800 Solanum pennellii HOM05D004730 ORTHO05D005705 2.3e-218 762.3 519 76.7
Actinidia10133 Actinidia chinensis HOM05D004730 ORTHO05D005705 5.1e-218 761.1 517 77.8
Nn1g01877 Nelumbo nucifera HOM05D004730 ORTHO05D005705 8.7e-218 760.4 502 78.5
GSVIVG01027092001 Vitis vinifera HOM05D004730 ORTHO05D005705 8.7e-218 760.4 507 77.7
Solyc05g050390.4 Solanum lycopersicum HOM05D004730 ORTHO05D005705 1.5e-217 759.6 521 76.2
PGSC0003DMG400017986 Solanum tuberosum HOM05D004730 ORTHO05D005705 2.5e-217 758.8 518 76.6
Cc02_g39260 Coffea canephora HOM05D004730 ORTHO05D005705 2.1e-216 755.7 518 76.3
CAN.G239.1 Capsicum annuum HOM05D004730 ORTHO05D005705 3.7e-216 755.0 508 77.0
SGA_v2.0_scaffold5G03013 Striga asiatica HOM05D004730 ORTHO05D005705 4.8e-216 754.6 501 78.0
Peaxi162Scf00403g00522 Petunia axillaris HOM05D004730 ORTHO05D005705 6.9e-215 750.7 517 77.0
Migut.B01859 Erythranthe guttata HOM05D004730 ORTHO05D005705 5.8e-214 747.7 509 76.0
MSTRG.17337 Avicennia marina HOM05D004730 ORTHO05D005705 9.9e-214 746.9 499 77.4
SalBow3G2618 Salvia bowleyana HOM05D004730 ORTHO05D005705 1.7e-213 746.1 513 75.4
AUR62023469 Chenopodium quinoa HOM05D004730 ORTHO05D005705 2.9e-213 745.3 508 76.2
MBI06_g08459_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 2.1e-211 739.2 513 75.0
PGR031G3931 Punica granatum HOM05D004730 ORTHO05D005705 2.7e-211 738.8 507 76.3
CSS0011474 Camellia sinensis var. sinensis HOM05D004730 ORTHO05D005705 3.5e-211 738.4 509 75.8
Nitab4.5_0004506g0070 Nicotiana tabacum HOM05D004730 ORTHO05D005705 3.5e-211 738.4 517 75.6
Prupe.2G187200 Prunus persica HOM05D004730 ORTHO05D005705 1.0e-210 736.9 494 77.5
Ciclev10019746m.g Citrus clementina HOM05D004730 ORTHO05D005705 8.7e-210 733.8 500 76.4
FvH4_7g16330 Fragaria vesca HOM05D004730 ORTHO05D005705 8.7e-210 733.8 490 77.1
FAN06G3857 Fragaria x ananassa HOM05D004730 ORTHO05D005705 2.5e-209 732.3 490 76.9
FAN06G4548 Fragaria x ananassa HOM05D004730 ORTHO05D005705 4.3e-209 731.5 490 76.9
FAN10G2003 Fragaria x ananassa HOM05D004730 ORTHO05D005705 5.6e-209 731.1 495 75.8
RcHm_v2.0_Chr1g0359341 Rosa chinensis HOM05D004730 ORTHO05D005705 1.3e-208 729.9 495 76.2
FAN03G1043 Fragaria x ananassa HOM05D004730 ORTHO05D005705 2.1e-208 729.2 496 76.2
PSO339G2575 Papaver somniferum HOM05D004730 ORTHO05D005705 6.2e-208 727.6 506 75.1
Lj7C501G3 Lonicera japonica HOM05D004730 ORTHO05D005705 4.0e-207 724.9 581 66.8
Ah.05g179630 Amaranthus hybridus HOM05D004730 ORTHO05D005705 5.3e-207 724.5 495 75.2
EL10Ac1g00278 Beta vulgaris HOM05D004730 ORTHO05D005705 6.9e-207 724.2 497 76.1
Gorai.004G152100 Gossypium raimondii HOM05D004730 ORTHO05D005705 9.0e-207 723.8 507 74.2
THA.LOC104817359 Tarenaya hassleriana HOM05D004730 ORTHO05D005705 9.0e-207 723.8 505 74.5
Hund16708 Selenicereus undatus HOM05D004730 ORTHO05D005705 1.2e-206 723.4 504 74.6
Aqoxy2G00449 Aquilegia oxysepala HOM05D004730 ORTHO05D005705 1.0e-205 720.3 498 74.9
Eucgr.D02369 Eucalyptus grandis HOM05D004730 ORTHO05D005705 2.2e-205 719.2 508 74.2
Gohir.D08G146500 Gossypium hirsutum HOM05D004730 ORTHO05D005705 2.2e-205 719.2 507 73.8
MD07G1148700 Malus domestica HOM05D004730 ORTHO05D005705 2.2e-205 719.2 487 76.2
Lalb_Chr21g0314351 Lupinus albus HOM05D004730 ORTHO05D005705 1.1e-204 716.8 522 72.8
Gohir.A08G125600 Gossypium hirsutum HOM05D004730 ORTHO05D005705 1.9e-204 716.1 507 73.2
Thecc.01G343400 Theobroma cacao HOM05D004730 ORTHO05D005705 3.2e-204 715.3 503 74.8
Atru.chr5.659 Acer truncatum HOM05D004730 ORTHO05D005705 1.2e-203 713.4 507 75.1
Oeu015369.3 Olea europaea HOM05D004730 ORTHO05D005705 4.6e-203 711.4 520 71.2
Cfa003807 Carpinus fangiana HOM05D004730 ORTHO05D005705 7.9e-203 710.7 504 74.6
Potri.002G170100 Populus trichocarpa HOM05D004730 ORTHO05D005705 2.3e-202 709.1 485 76.1
Glyma.11G153900 Glycine max HOM05D004730 ORTHO05D005705 2.5e-201 705.7 484 75.0
PSO210G5634 Papaver somniferum HOM05D004730 ORTHO05D005705 9.7e-201 703.7 501 73.5
VMungo1080G1812 Vigna mungo HOM05D004730 ORTHO05D005705 1.6e-200 703.0 487 73.7
Glyma.04G141000 Glycine max HOM05D004730 ORTHO05D005705 2.2e-200 702.6 498 73.9
Medtr3g018770 Medicago truncatula HOM05D004730 ORTHO05D005705 2.8e-200 702.2 501 73.1
Lj3g0019549 Lotus japonicus HOM05D004730 ORTHO05D005705 3.7e-200 701.8 485 74.2
TPR.G9866 Trifolium pratense HOM05D004730 ORTHO05D005705 8.2e-200 700.7 500 73.2
Duzib138G0598 Durio zibethinus HOM05D004730 ORTHO05D005705 1.1e-199 700.3 495 73.5
MELO3C022308.2 Cucumis melo HOM05D004730 ORTHO05D005705 4.5e-198 694.9 505 73.9
CANSAT56G1965 Cannabis sativa HOM05D004730 ORTHO05D005705 1.0e-197 693.7 503 72.2
Phvul.005G029900 Phaseolus vulgaris HOM05D004730 ORTHO05D005705 1.3e-197 693.3 487 73.1
CsaV3_6G008300 Cucumis sativus L. HOM05D004730 ORTHO05D005705 1.7e-197 693.0 506 73.7
Sc23g0002110 Simmondsia chinensis HOM05D004730 ORTHO05D005705 1.7e-197 693.0 477 74.6
Sp5g01680 Schrenkiella parvula HOM05D004730 ORTHO05D005705 1.1e-196 690.3 503 71.8
Carub.0005s2846 Capsella rubella HOM05D004730 ORTHO05D005705 1.9e-196 689.5 503 71.8
Thhalv10005894m.g Eutrema salsugineum HOM05D004730 ORTHO05D005705 4.2e-196 688.3 503 71.4
Carub.0003s3432 Capsella rubella HOM05D004730 ORTHO05D005705 5.5e-196 688.0 503 71.8
MD01G1079900 Malus domestica HOM05D004730 ORTHO05D005705 7.2e-196 687.6 493 73.0
Haze_15648 Corylus avellana HOM05D004730 ORTHO05D005705 4.6e-195 684.9 521 71.2
arahy.Tifrunner.gnm1.ann1.DU0G1C Arachis hypogaea HOM05D004730 ORTHO05D005705 7.9e-195 684.1 536 68.8
CARHR172020 Cardamine hirsuta HOM05D004730 ORTHO05D005705 1.4e-194 683.3 505 70.3
CiPaw.01G075800 Carya illinoinensis HOM05D004730 ORTHO05D005705 1.4e-194 683.3 457 79.2
AL5G44220 Arabidopsis lyrata HOM05D004730 ORTHO05D005705 8.8e-194 680.6 503 71.2
COL.COLO4_06293 Corchorus olitorius HOM05D004730 ORTHO05D005705 1.5e-193 679.9 457 77.5
Sed0022953 Sechium edule HOM05D004730 ORTHO05D005705 1.5e-193 679.9 488 73.4
Sc01g0002740 Simmondsia chinensis HOM05D004730 ORTHO05D005705 2.2e-192 676.0 486 72.0
ATR0213G028 Amborella trichopoda HOM05D004730 ORTHO05D005705 8.2e-192 674.1 507 67.7
unitig_62.g23797 Utricularia gibba HOM05D004730 ORTHO05D005705 1.4e-191 673.3 511 68.7
Aa31LG10G15710 Aethionema arabicum HOM05D004730 ORTHO05D005705 3.1e-191 672.2 503 70.4
FAN10G3709 Fragaria x ananassa HOM05D004730 ORTHO05D005705 1.2e-190 670.2 496 71.4
C06p27700 Brassica napus HOM05D004730 ORTHO05D005705 5.0e-189 664.8 494 70.4
C06p27860 Brassica napus HOM05D004730 ORTHO05D005705 5.0e-189 664.8 494 70.4
BolC6t37941H Brassica oleracea HOM05D004730 ORTHO05D005705 1.4e-186 656.8 516 67.8
Sabra02G0142200 Salix brachista HOM05D004730 ORTHO05D005705 1.5e-182 643.3 538 66.2
Aa31LG1G27820 Aethionema arabicum HOM05D004730 ORTHO05D005705 2.6e-182 642.5 495 67.9
BcaC08g45152 Brassica carinata HOM05D004730 ORTHO05D005705 2.2e-181 639.4 494 68.2
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 1.2e-179 633.6 455 73.2
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 2.7e-179 632.5 455 73.0
Manes.01G246700 Manihot esculenta HOM05D004730 ORTHO05D005705 1.8e-178 629.8 437 76.9
arahy.Tifrunner.gnm1.ann1.EBD5YY Arachis hypogaea HOM05D004730 ORTHO05D005705 2.3e-178 629.4 521 67.2
AUR62004484 Chenopodium quinoa HOM05D004730 ORTHO05D005705 8.5e-173 610.9 460 72.0
Zm00001eb142950 Zea mays HOM05D004730 ORTHO05D005705 7.2e-172 607.8 472 66.3
Os01g0681400 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 3.6e-171 605.5 494 64.2
TWI23G0180 Tripterygium wilfordii HOM05D004730 ORTHO05D005705 5.2e-170 601.7 518 64.5
FAN01G1335 Fragaria x ananassa HOM05D004730 ORTHO05D005705 1.2e-169 600.5 414 75.4
HPP92_011453 Vanilla planifolia HOM05D004730 ORTHO05D005705 5.3e-167 591.7 515 63.1
Duzib133G1016 Durio zibethinus HOM05D004730 ORTHO05D005705 9.1e-167 590.9 503 65.2
Os03g0644000 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 9.1e-167 590.9 502 62.4
CDE05G0988 Ceratophyllum demersum HOM05D004730 ORTHO05D005705 2.0e-166 589.7 493 62.1
TWI59G0293 Tripterygium wilfordii HOM05D004730 ORTHO05D005705 2.2e-165 586.3 515 62.7
SEGI_06994 Sequoiadendron giganteum HOM05D004730 ORTHO05D005705 2.9e-165 585.9 505 60.8
AT3G61710 Arabidopsis thaliana HOM05D004730 ORTHO05D005705 4.2e-164 582.0 437 69.6
Os03g0258500 Oryza sativa ssp. japonica HOM05D004730 ORTHO05D005705 3.1e-159 565.8 479 62.8
Oeu019761.1 Olea europaea HOM05D004730 ORTHO05D005705 4.1e-159 565.5 321 85.7
PGR031G3051 Punica granatum HOM05D004730 ORTHO05D005705 1.6e-158 563.5 536 60.6
vmacro12679 Vaccinium macrocarpon HOM05D004730 ORTHO05D005705 2.8e-155 552.7 390 74.6
SHI13286 Sapria himalayana HOM05D004730 ORTHO05D005705 1.5e-153 547.0 435 66.7
Pp3c10_4130 Physcomitrium patens HOM05D004730 ORTHO05D005705 2.2e-152 543.1 501 58.5
Zm00001eb364100 Zea mays HOM05D004730 ORTHO05D005705 3.7e-152 542.3 491 58.7
Dinv35110 Davidia involucrata HOM05D004730 ORTHO05D005705 7.0e-151 538.1 371 77.9
Mapoly0091s0016 Marchantia polymorpha HOM05D004730 ORTHO05D005705 1.3e-149 533.9 508 56.7
Dinv32581 Davidia involucrata HOM05D004730 ORTHO05D005705 1.7e-149 533.5 363 79.1
Pp3c1_21510 Physcomitrium patens HOM05D004730 ORTHO05D005705 3.2e-143 512.7 487 56.9
TAR374G0734 Trochodendron aralioides HOM05D004730 ORTHO05D005705 1.6e-142 510.4 364 75.3
Psat5g217520 Pisum sativum HOM05D004730 ORTHO05D005705 7.3e-140 501.5 382 69.9
Rhsim01G0172100 Rhododendron simsii HOM05D004730 ORTHO05D005705 6.8e-138 495.0 492 57.3
SMO114G0122 Selaginella moellendorffii HOM05D004730 ORTHO05D005705 6.8e-138 495.0 479 55.9
AagrBONN_evm.TU.Sc2ySwM_344.2008 Anthoceros agrestis HOM05D004730 ORTHO05D005705 1.0e-133 481.1 512 51.0
CANSAT56G2405 Cannabis sativa HOM05D004730 ORTHO05D005705 1.9e-132 476.9 283 81.6
ClCG06G002220 Citrullus lanatus HOM05D004730 ORTHO05D005705 5.2e-130 468.8 358 72.1
BolC6t37951H Brassica oleracea HOM05D004730 ORTHO05D005705 1.7e-125 453.8 357 69.2
Cpa.g.sc96.6 Carica papaya HOM05D004730 ORTHO05D005705 5.1e-117 425.6 339 70.5
CBR_g66692 Chara braunii HOM05D004730 ORTHO05D005705 1.3e-112 411.0 398 52.3
MBI01_g34153_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 6.9e-106 388.7 490 50.0
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 4.8e-99 365.9 361 60.1
TAR374G1455 Trochodendron aralioides HOM05D004730 ORTHO05D005705 4.5e-89 332.8 241 70.1
Ca_26857_v3 Cicer arietinum L. HOM05D004730 ORTHO05D005705 9.7e-84 315.1 324 57.4
Actinidia20237 Actinidia chinensis HOM05D004730 ORTHO05D005705 2.5e-79 300.4 300 59.3
MBI01_g41444_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 2.5e-79 300.4 311 57.6
CARHR263800 Cardamine hirsuta HOM05D004730 ORTHO05D005705 1.2e-78 298.1 238 64.7
MBI06_g41841_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 4.8e-75 286.2 214 66.4
FAN01G0353 Fragaria x ananassa HOM05D004730 ORTHO05D005705 9.4e-71 271.9 152 84.9
Cre01.g020264 Chlamydomonas reinhardtii HOM05D004730 ORTHO05D005705 2.7e-70 270.4 396 40.2
MCO03G136 Micromonas commoda HOM05D004730 ORTHO05D005705 2.7e-62 243.8 315 42.5
Ca_26830_v3 Cicer arietinum L. HOM05D004730 ORTHO05D005705 3.7e-59 233.4 135 82.2
Actinidia20236 Actinidia chinensis HOM05D004730 ORTHO05D005705 3.1e-58 230.3 131 82.4
Cpa.g.sc96.5 Carica papaya HOM05D004730 ORTHO05D005705 1.3e-56 224.9 135 80.0
PRCOL_00007095 Prasinoderma coloniale HOM05D004730 ORTHO05D005705 4.7e-54 216.5 330 40.9
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 2.8e-51 207.2 201 61.7
ATR0213G009 Amborella trichopoda HOM05D004730 ORTHO05D005705 1.0e-40 172.2 100 79.0
Hma1.2p1_0295F.1_g116660 Hydrangea macrophylla HOM05D004730 ORTHO05D005705 5.5e-39 166.4 152 59.2
MBI01_g11796_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 1.5e-36 158.3 110 70.0
ATR0213G026 Amborella trichopoda HOM05D004730 ORTHO05D005705 5.2e-29 133.3 190 46.8
Cfa022403 Carpinus fangiana HOM05D004730 ORTHO05D005705 2.4e-26 124.4 359 27.9
arahy.Tifrunner.gnm1.ann1.PHUB4S Arachis hypogaea HOM05D004730 ORTHO05D005705 3.2e-26 124.0 68 82.4
CDE08G1494 Ceratophyllum demersum HOM05D004730 ORTHO05D005705 2.2e-19 101.3 82 62.2
Ca_26856_v3 Cicer arietinum L. HOM05D004730 ORTHO05D005705 2.2e-19 101.3 155 45.8
MBI10_g27627_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D017720 3.5e-17 94.0 65 73.8
GSVIVG01027089001 Vitis vinifera HOM05D004730 ORTHO05D005705 2.3e-13 81.3 45 82.2
arahy.Tifrunner.gnm1.ann1.LSW4XK Arachis hypogaea HOM05D000092 ORTHO05D000042 2.0e-12 78.2 72 55.6
arahy.Tifrunner.gnm1.ann1.CLZ951 Arachis hypogaea HOM05D004730 ORTHO05D005705 2.4e-10 71.2 38 84.2
MBI01_g41445_MAGBIO Magnolia biondii HOM05D004730 ORTHO05D005705 2.3e-08 64.7 46 60.9
arahy.Tifrunner.gnm1.ann1.VTA1BU Arachis hypogaea HOM05D004730 ORTHO05D005705 3.0e-08 64.3 64 54.7
MBI14_g24972_MAGBIO Magnolia biondii HOM05D004081 ORTHO05D004935 5.6e-07 60.1 51 64.7

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (3 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (5 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (3 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (7 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (8 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (0 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)

Program Settings