Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0345411 Helianthus annuus HOM05D004771 ORTHO05D005565 7.9e-87 324.3 244 100.0
HanXRQChr05g0160091 Helianthus annuus HOM05D004771 ORTHO05D005565 4.5e-74 282.0 244 75.4
ECA248G2169 Erigeron canadensis HOM05D004771 ORTHO05D005565 4.5e-42 175.6 248 54.0
Lsat_1_v5_gn_1_71561 Lactuca sativa HOM05D007128 ORTHO05D009059 3.8e-33 146.0 257 51.0
CSS0030116 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 2.9e-20 103.2 186 42.5
Aqoxy3G02687 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 3.7e-20 102.8 244 40.2
Aqoxy3G04244 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 8.3e-20 101.7 245 38.4
CSS0010443 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 1.1e-19 101.3 185 42.7
Aqoxy5G00826 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 1.2e-18 97.8 243 38.3
TAR628G1069 Trochodendron aralioides HOM05D004771 ORTHO05D005565 1.2e-18 97.8 245 42.9
Dinv44219 Davidia involucrata HOM05D000703 ORTHO05D000633 2.7e-18 96.7 190 42.6
TPR.G12006 Trifolium pratense HOM05D004771 ORTHO05D005565 2.7e-18 96.7 185 39.5
Ciclev10029295m.g Citrus clementina HOM05D004771 ORTHO05D005565 4.6e-18 95.9 239 40.6
Ciclev10029331m.g Citrus clementina HOM05D004771 ORTHO05D005565 4.6e-18 95.9 239 38.9
ClCG10G002170 Citrullus lanatus HOM05D004771 ORTHO05D005565 6.0e-18 95.5 188 39.9
GSVIVG01037017001 Vitis vinifera HOM05D004771 ORTHO05D005565 6.0e-18 95.5 244 36.9
Thecc.02G032500 Theobroma cacao HOM05D004771 ORTHO05D005565 7.8e-18 95.1 246 40.2
Duzib132G0558 Durio zibethinus HOM05D004771 ORTHO05D005565 1.0e-17 94.7 248 41.5
Sed0002941 Sechium edule HOM05D004771 ORTHO05D005565 1.3e-17 94.4 183 39.3
Lj8P345T14 Lonicera japonica HOM05D004771 ORTHO05D005565 2.3e-17 93.6 243 35.8
Lj8C288T1 Lonicera japonica HOM05D004771 ORTHO05D005565 3.0e-17 93.2 187 39.0
Dinv22681 Davidia involucrata HOM05D004771 ORTHO05D005565 3.9e-17 92.8 164 44.5
Aqoxy3G02689_Aqoxy3G02690 Aquilegia oxysepala HOM05D001377 ORTHO05D005565 5.1e-17 92.4 246 39.8
CiPaw.05G182000 Carya illinoinensis HOM05D004771 ORTHO05D005565 5.1e-17 92.4 194 40.7
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 5.1e-17 92.4 241 37.8
MELO3C013897.2 Cucumis melo HOM05D004771 ORTHO05D005565 5.1e-17 92.4 188 38.3
Medtr1g009780 Medicago truncatula HOM05D004771 ORTHO05D005565 6.6e-17 92.0 180 41.1
GSVIVG01022390001 Vitis vinifera HOM05D004771 ORTHO05D005565 6.6e-17 92.0 259 41.3
QL11p028495 Quercus lobata HOM05D004771 ORTHO05D005565 8.6e-17 91.7 184 39.7
Glyma.20G137100 Glycine max HOM05D004771 ORTHO05D005565 1.5e-16 90.9 187 39.6
Atru.chr4.2044 Acer truncatum HOM05D004771 ORTHO05D005565 1.9e-16 90.5 244 41.8
TWI23G0030 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 2.5e-16 90.1 192 39.1
COL.COLO4_17806 Corchorus olitorius HOM05D004771 ORTHO05D005565 4.3e-16 89.4 187 40.6
Phvul.007G048400 Phaseolus vulgaris HOM05D004771 ORTHO05D005565 4.3e-16 89.4 258 40.3
TAR625G0649 Trochodendron aralioides HOM05D004771 ORTHO05D005565 4.3e-16 89.4 245 43.3
Actinidia33010 Actinidia chinensis HOM05D004771 ORTHO05D005565 5.6e-16 89.0 255 40.4
CsaV3_3G002260 Cucumis sativus L. HOM05D004771 ORTHO05D005565 5.6e-16 89.0 192 38.0
DCAR_007735 Daucus carota HOM05D004771 ORTHO05D005565 5.6e-16 89.0 186 42.5
VMungo0720G1115 Vigna mungo HOM05D004771 ORTHO05D005565 7.3e-16 88.6 153 41.8
Gohir.D01G171700 Gossypium hirsutum HOM05D004771 ORTHO05D005565 9.5e-16 88.2 187 40.6
PSO170G1452 Papaver somniferum HOM05D004771 ORTHO05D005565 9.5e-16 88.2 241 38.2
QL09p037751 Quercus lobata HOM05D004771 ORTHO05D005565 9.5e-16 88.2 189 38.6
PSO017G4159 Papaver somniferum HOM05D004771 ORTHO05D005565 1.2e-15 87.8 240 38.8
Potri.015G035700 Populus trichocarpa HOM05D004771 ORTHO05D005565 1.6e-15 87.4 188 39.4
THA.LOC104816989 Tarenaya hassleriana HOM05D004771 ORTHO05D005565 1.6e-15 87.4 183 41.0
Aa31LG2G7800 Aethionema arabicum HOM05D004771 ORTHO05D005565 2.8e-15 86.7 183 39.9
Cfa004725 Carpinus fangiana HOM05D004771 ORTHO05D005565 2.8e-15 86.7 248 39.9
Gorai.002G213200 Gossypium raimondii HOM05D004771 ORTHO05D005565 2.8e-15 86.7 187 40.1
Manes.10G087700 Manihot esculenta HOM05D004771 ORTHO05D005565 2.8e-15 86.7 182 38.5
Nn2g15843 Nelumbo nucifera HOM05D004771 ORTHO05D005565 2.8e-15 86.7 242 38.0
Nn4g25002 Nelumbo nucifera HOM05D004771 ORTHO05D005565 2.8e-15 86.7 246 41.1
Psat6g007560 Pisum sativum HOM05D004771 ORTHO05D005565 2.8e-15 86.7 250 36.8
TPR.G31901 Trifolium pratense HOM05D004771 ORTHO05D005565 2.8e-15 86.7 184 38.6
MBI13_g09224_MAGBIO Magnolia biondii HOM05D004771 ORTHO05D005565 3.6e-15 86.3 244 39.8
CANSAT25G0049 Cannabis sativa HOM05D004771 ORTHO05D005565 4.7e-15 85.9 188 38.3
Lalb_Chr02g0144821 Lupinus albus HOM05D004771 ORTHO05D005565 4.7e-15 85.9 187 40.1
Prupe.8G152600 Prunus persica HOM05D004771 ORTHO05D005565 6.2e-15 85.5 258 39.5
Haze_10334 Corylus avellana HOM05D004771 ORTHO05D005565 8.1e-15 85.1 184 40.2
Lj6g0021608 Lotus japonicus HOM05D004771 ORTHO05D005565 8.1e-15 85.1 184 38.6
MSTRG.6635 Avicennia marina HOM05D004771 ORTHO05D005565 1.4e-14 84.3 254 37.4
AUR62009845 Chenopodium quinoa HOM05D004771 ORTHO05D005565 1.4e-14 84.3 241 35.3
AUR62038158 Chenopodium quinoa HOM05D004771 ORTHO05D005565 1.4e-14 84.3 186 37.1
Ca_12871_v3 Cicer arietinum L. HOM05D004771 ORTHO05D005565 1.4e-14 84.3 167 40.1
Eucgr.C02425 Eucalyptus grandis HOM05D004771 ORTHO05D005565 1.4e-14 84.3 186 37.6
PSO528G0234 Papaver somniferum HOM05D004771 ORTHO05D005565 1.8e-14 84.0 243 39.1
Migut.M00048 Erythranthe guttata HOM05D004771 ORTHO05D005565 2.3e-14 83.6 248 35.1
EL10Ac7g16361 Beta vulgaris HOM05D004771 ORTHO05D005565 4.0e-14 82.8 186 37.6
Thhalv10019781m.g Eutrema salsugineum HOM05D004771 ORTHO05D005565 4.0e-14 82.8 192 39.6
CANSAT25G2974 Cannabis sativa HOM05D004771 ORTHO05D005565 5.2e-14 82.4 188 38.3
arahy.Tifrunner.gnm1.ann1.DYSV1F Arachis hypogaea HOM05D004771 ORTHO05D005565 6.8e-14 82.0 238 32.8
Cc02_g28780 Coffea canephora HOM05D004771 ORTHO05D005565 6.8e-14 82.0 187 39.0
COL.COLO4_26627 Corchorus olitorius HOM05D004771 ORTHO05D005565 6.8e-14 82.0 173 39.9
Lj5g0002463 Lotus japonicus HOM05D004771 ORTHO05D005565 6.8e-14 82.0 185 35.7
PSO170G1616 Papaver somniferum HOM05D004771 ORTHO05D005565 6.8e-14 82.0 244 38.5
CANSAT56G2106 Cannabis sativa HOM05D004771 ORTHO05D005565 8.9e-14 81.6 191 38.7
Gohir.A01G180600 Gossypium hirsutum HOM05D004771 ORTHO05D005565 2.0e-13 80.5 178 39.9
PGR142G3141 Punica granatum HOM05D004771 ORTHO05D005565 2.6e-13 80.1 186 37.6
Sopen04g019850 Solanum pennellii HOM05D004771 ORTHO05D005565 3.4e-13 79.7 186 38.7
Haze_04594 Corylus avellana HOM05D000399 ORTHO05D000304 4.4e-13 79.3 269 37.5
Nitab4.5_0002078g0010 Nicotiana tabacum HOM05D004771 ORTHO05D005565 4.4e-13 79.3 188 37.8
arahy.Tifrunner.gnm1.ann1.8327BB Arachis hypogaea HOM05D004771 ORTHO05D005565 5.8e-13 79.0 238 34.0
Cpa.g.c27001.4 Carica papaya HOM05D004771 ORTHO05D005565 5.8e-13 79.0 247 37.7
MD10G1112800 Malus domestica HOM05D004771 ORTHO05D005565 5.8e-13 79.0 185 36.8
RcHm_v2.0_Chr6g0247751 Rosa chinensis HOM05D004771 ORTHO05D005565 5.8e-13 79.0 246 37.8
ATR0736G167 Amborella trichopoda HOM05D004771 ORTHO05D005565 9.9e-13 78.2 240 40.0
Sc12g0010390 Simmondsia chinensis HOM05D004771 ORTHO05D005565 9.9e-13 78.2 225 40.0
FvH4_2g02960 Fragaria vesca HOM05D004771 ORTHO05D005565 1.3e-12 77.8 185 35.1
MD05G1109000 Malus domestica HOM05D004771 ORTHO05D005565 1.3e-12 77.8 185 36.2
BraA07t31335Z Brassica rapa HOM05D004771 ORTHO05D005565 1.7e-12 77.4 124 46.0
PGSC0003DMG400028994 Solanum tuberosum HOM05D004771 ORTHO05D005565 2.2e-12 77.0 246 34.1
FAN24G0749 Fragaria x ananassa HOM05D004771 ORTHO05D005565 2.9e-12 76.6 184 34.8
PGSC0003DMG400005017 Solanum tuberosum HOM05D004771 ORTHO05D005565 2.9e-12 76.6 186 36.0
CDE02G0226 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 3.7e-12 76.3 240 35.8
Solyc04g049660.3 Solanum lycopersicum HOM05D004771 ORTHO05D005565 3.7e-12 76.3 249 36.5
BraA02t06780Z Brassica rapa HOM05D004771 ORTHO05D005565 4.9e-12 75.9 124 45.2
CARHR291250 Cardamine hirsuta HOM05D004771 ORTHO05D005565 4.9e-12 75.9 137 43.1
Nitab4.5_0000575g0030 Nicotiana tabacum HOM05D004771 ORTHO05D005565 4.9e-12 75.9 187 36.9
Hund20829 Selenicereus undatus HOM05D004771 ORTHO05D005565 4.9e-12 75.9 185 35.7
A07p37720 Brassica napus HOM05D004771 ORTHO05D005565 6.4e-12 75.5 122 45.9
C06p45590 Brassica napus HOM05D004771 ORTHO05D005565 6.4e-12 75.5 122 45.9
BolC6t39610H Brassica oleracea HOM05D004771 ORTHO05D005565 6.4e-12 75.5 122 45.9
CDE05G2657 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 6.4e-12 75.5 239 31.4
A02p17330 Brassica napus HOM05D004771 ORTHO05D005565 8.3e-12 75.1 139 43.9
Carub.0002s1828 Capsella rubella HOM05D004771 ORTHO05D005565 1.1e-11 74.7 133 42.1
Medtr3g080910 Medicago truncatula HOM05D004771 ORTHO05D005565 1.1e-11 74.7 120 42.5
BolC2t08948H Brassica oleracea HOM05D004771 ORTHO05D005565 1.4e-11 74.3 124 43.5
DCAR_027620 Daucus carota HOM05D004771 ORTHO05D005565 1.4e-11 74.3 186 37.6
Eucgr.I02508 Eucalyptus grandis HOM05D004771 ORTHO05D005565 1.4e-11 74.3 187 34.2
TWI14G0977 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 1.4e-11 74.3 174 37.9
BcaC03g15291 Brassica carinata HOM05D004771 ORTHO05D005565 2.4e-11 73.6 139 42.4
C02p28980 Brassica napus HOM05D004771 ORTHO05D005565 2.4e-11 73.6 139 42.4
RhsimUnG0159200 Rhododendron simsii HOM05D004771 ORTHO05D005565 2.4e-11 73.6 186 37.1
CAN.G490.38 Capsicum annuum HOM05D004771 ORTHO05D005565 3.2e-11 73.2 241 32.0
BcaB05g24668 Brassica carinata HOM05D004771 ORTHO05D005565 4.1e-11 72.8 124 43.5
BcaC02g09527 Brassica carinata HOM05D004771 ORTHO05D005565 7.1e-11 72.0 188 36.7
C04p43760 Brassica napus HOM05D004771 ORTHO05D005565 7.1e-11 72.0 188 36.7
BolC4t25958H Brassica oleracea HOM05D004771 ORTHO05D005565 7.1e-11 72.0 188 36.7
CAN.G630.7 Capsicum annuum HOM05D004771 ORTHO05D005565 9.2e-11 71.6 188 36.7
Manes.07G051000 Manihot esculenta HOM05D004771 ORTHO05D005565 9.2e-11 71.6 115 41.7
AL2G31090 Arabidopsis lyrata HOM05D004771 ORTHO05D005565 1.6e-10 70.9 188 36.7
Peaxi162Scf00170g00041 Petunia axillaris HOM05D004771 ORTHO05D005565 2.1e-10 70.5 250 34.4
unitig_899.g15063 Utricularia gibba HOM05D004771 ORTHO05D005565 2.7e-10 70.1 246 34.1
vmacro05477 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 2.7e-10 70.1 193 42.5
AT1G71430 Arabidopsis thaliana HOM05D004771 ORTHO05D005565 3.5e-10 69.7 187 36.9
Sp5g26590 Schrenkiella parvula HOM05D004771 ORTHO05D005565 4.6e-10 69.3 122 43.4
arahy.Tifrunner.gnm1.ann1.ATP5C9 Arachis hypogaea HOM05D004771 ORTHO05D005565 6.6e-09 65.5 121 39.7
Sed0006388 Sechium edule HOM05D004771 ORTHO05D005565 8.6e-09 65.1 122 37.7
SEGI_32093 Sequoiadendron giganteum HOM05D004771 ORTHO05D005565 8.6e-09 65.1 178 32.0
SGA_v2.0_scaffold181G39690 Striga asiatica HOM05D004771 ORTHO05D005565 1.9e-08 63.9 112 43.8
AUR62017723 Chenopodium quinoa HOM05D004771 ORTHO05D005565 7.3e-08 62.0 175 32.6
vmacro00584 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 9.5e-08 61.6 173 41.6
Zm00001eb159770 Zea mays HOM05D004771 ORTHO05D005565 9.5e-08 61.6 133 38.3
Os01g0617800 Oryza sativa ssp. japonica HOM05D004771 ORTHO05D005565 3.6e-07 59.7 184 35.9
Zm00001eb002910 Zea mays HOM05D004771 ORTHO05D005565 4.7e-07 59.3 192 34.4
Zm00001eb003040 Zea mays HOM05D004771 ORTHO05D005565 4.7e-07 59.3 192 34.4
Rhsim09G0033000 Rhododendron simsii HOM05D004771 ORTHO05D005565 3.1e-06 56.6 242 35.1
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 8.9e-06 55.1 140 32.9

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (4 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (5 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (3 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (2 genes)
Corchorus olitorius (2 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (3 genes)

Program Settings