Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0341231 Helianthus annuus HOM05D005009 ORTHO05D006203 9.7e-175 616.7 309 100.0
ECA248G2538 Erigeron canadensis HOM05D005009 ORTHO05D006203 1.2e-100 370.5 191 93.7
Lsat_1_v5_gn_1_117041 Lactuca sativa HOM05D005009 ORTHO05D006203 8.7e-99 364.4 191 92.1
TPR.G8532 Trifolium pratense HOM05D005009 ORTHO05D006203 2.8e-97 359.4 198 86.9
Atru.chr12.1310 Acer truncatum HOM05D005009 ORTHO05D006203 6.2e-97 358.2 189 91.5
Dinv32009 Davidia involucrata HOM05D005009 ORTHO05D006203 8.2e-97 357.8 189 91.0
Eucgr.E03953 Eucalyptus grandis HOM05D005009 ORTHO05D006203 1.1e-96 357.5 191 90.6
Cc03_g14060 Coffea canephora HOM05D005009 ORTHO05D006203 1.4e-96 357.1 189 91.0
Haze_02993 Corylus avellana HOM05D005009 ORTHO05D006203 1.4e-96 357.1 203 85.7
Migut.B01192 Erythranthe guttata HOM05D005009 ORTHO05D006203 1.4e-96 357.1 191 89.5
Thecc.03G114300 Theobroma cacao HOM05D005009 ORTHO05D006203 1.4e-96 357.1 189 89.9
Duzib068G0995 Durio zibethinus HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 91.0
Duzib084G0080 Durio zibethinus HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 90.5
Gohir.A03G073900 Gossypium hirsutum HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 91.0
Gohir.D03G100300 Gossypium hirsutum HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 91.0
Gorai.003G105400 Gossypium raimondii HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 91.0
CiPaw.14G009400 Carya illinoinensis HOM05D005009 ORTHO05D006203 3.1e-96 355.9 189 90.5
Nn7g36825 Nelumbo nucifera HOM05D005009 ORTHO05D006203 3.1e-96 355.9 189 89.9
Dinv11234 Davidia involucrata HOM05D005009 ORTHO05D006203 4.1e-96 355.5 189 89.4
MBI19_g44926_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 4.1e-96 355.5 188 91.0
Potri.003G193900 Populus trichocarpa HOM05D005009 ORTHO05D006203 4.1e-96 355.5 190 89.5
Ciclev10002585m.g Citrus clementina HOM05D005009 ORTHO05D006203 5.3e-96 355.1 189 90.5
COL.COLO4_32171 Corchorus olitorius HOM05D000011 ORTHO05D006203 5.3e-96 355.1 188 89.9
Manes.11G007500 Manihot esculenta HOM05D005009 ORTHO05D006203 5.3e-96 355.1 189 89.9
GSVIVG01036607001 Vitis vinifera HOM05D005009 ORTHO05D006203 5.3e-96 355.1 189 89.9
MSTRG.20500 Avicennia marina HOM05D005009 ORTHO05D006203 6.9e-96 354.8 190 88.9
Medtr8g040630 Medicago truncatula HOM05D005009 ORTHO05D006203 6.9e-96 354.8 193 87.6
PSO384G0249 Papaver somniferum HOM05D005009 ORTHO05D006203 9.0e-96 354.4 191 89.5
Phvul.011G192750 Phaseolus vulgaris HOM05D005009 ORTHO05D006203 9.0e-96 354.4 191 89.0
PGR031G2406 Punica granatum HOM05D005009 ORTHO05D006203 1.2e-95 354.0 189 89.4
ATR0307G112 Amborella trichopoda HOM05D005009 ORTHO05D006203 1.5e-95 353.6 189 89.4
Lalb_Chr19g0132931 Lupinus albus HOM05D005009 ORTHO05D006203 1.5e-95 353.6 189 89.4
QL04p021447 Quercus lobata HOM05D005009 ORTHO05D006203 1.5e-95 353.6 189 89.9
QL07p029267 Quercus lobata HOM05D005009 ORTHO05D006203 1.5e-95 353.6 189 89.9
DCAR_006603 Daucus carota HOM05D005009 ORTHO05D006203 2.0e-95 353.2 189 88.9
PSO339G0131 Papaver somniferum HOM05D005009 ORTHO05D006203 2.0e-95 353.2 191 89.0
Prupe.2G043300 Prunus persica HOM05D005009 ORTHO05D006203 2.0e-95 353.2 189 89.4
SGA_v2.0_scaffold408G51079 Striga asiatica HOM05D005009 ORTHO05D006203 2.0e-95 353.2 189 88.9
TWI15G1146 Tripterygium wilfordii HOM05D005009 ORTHO05D006203 2.0e-95 353.2 189 88.9
Actinidia06220 Actinidia chinensis HOM05D005009 ORTHO05D006203 2.6e-95 352.8 189 88.9
EL10Ac2g02762 Beta vulgaris HOM05D005009 ORTHO05D006203 2.6e-95 352.8 191 88.5
Nitab4.5_0002838g0060 Nicotiana tabacum HOM05D005009 ORTHO05D006203 2.6e-95 352.8 188 90.4
TAR633G2352 Trochodendron aralioides HOM05D005009 ORTHO05D006203 2.6e-95 352.8 189 88.9
Aqoxy2G00437 Aquilegia oxysepala HOM05D005009 ORTHO05D006203 3.4e-95 352.4 189 88.4
CSS0011052 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 3.4e-95 352.4 189 88.9
Psat4g146480 Pisum sativum HOM05D005009 ORTHO05D006203 3.4e-95 352.4 191 88.5
THA.LOC104826749 Tarenaya hassleriana HOM05D005009 ORTHO05D006203 3.4e-95 352.4 189 88.4
Carub.0003s1167 Capsella rubella HOM05D005009 ORTHO05D006203 4.5e-95 352.1 189 88.4
Eucgr.G03210 Eucalyptus grandis HOM05D005009 ORTHO05D006203 5.8e-95 351.7 192 87.5
Solyc01g096610.4 Solanum lycopersicum HOM05D005009 ORTHO05D006203 5.8e-95 351.7 191 88.5
Sopen01g040340 Solanum pennellii HOM05D005009 ORTHO05D006203 5.8e-95 351.7 191 88.5
PGSC0003DMG401003286 Solanum tuberosum HOM05D005009 ORTHO05D006203 5.8e-95 351.7 191 88.5
FvH4_7g03830 Fragaria vesca HOM05D005009 ORTHO05D006203 1.0e-94 350.9 190 88.4
FAN03G3221 Fragaria x ananassa HOM05D005009 ORTHO05D006203 1.0e-94 350.9 190 88.4
FAN06G1190 Fragaria x ananassa HOM05D005009 ORTHO05D006203 1.0e-94 350.9 190 88.4
Lj3g0027433 Lotus japonicus HOM05D005009 ORTHO05D006203 1.0e-94 350.9 191 88.0
AL3G23960 Arabidopsis lyrata HOM05D005009 ORTHO05D006203 1.3e-94 350.5 189 87.3
MBI19_g37444_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 1.3e-94 350.5 195 88.2
FAN10G3328 Fragaria x ananassa HOM05D005009 ORTHO05D006203 2.2e-94 349.7 189 88.9
Zm00001eb317990 Zea mays HOM05D005009 ORTHO05D006203 2.2e-94 349.7 191 87.4
AUR62031741 Chenopodium quinoa HOM05D005009 ORTHO05D006203 2.9e-94 349.4 188 88.8
AUR62032626 Chenopodium quinoa HOM05D005009 ORTHO05D006203 2.9e-94 349.4 188 88.8
Glyma.09G090300 Glycine max HOM05D005009 ORTHO05D006203 2.9e-94 349.4 191 87.4
RcHm_v2.0_Chr1g0327201 Rosa chinensis HOM05D005009 ORTHO05D006203 2.9e-94 349.4 190 87.9
Sp3g10520 Schrenkiella parvula HOM05D005009 ORTHO05D006203 3.8e-94 349.0 189 87.8
AT3G12300 Arabidopsis thaliana HOM05D005009 ORTHO05D006203 5.0e-94 348.6 189 86.8
Thhalv10021577m.g Eutrema salsugineum HOM05D005009 ORTHO05D006203 1.4e-93 347.1 190 86.3
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla HOM05D005009 ORTHO05D006203 1.9e-93 346.7 201 85.1
SEGI_18977 Sequoiadendron giganteum HOM05D005009 ORTHO05D006203 1.9e-93 346.7 188 87.2
BcaC09g48230 Brassica carinata HOM05D005009 ORTHO05D006203 3.2e-93 345.9 189 86.8
BcaB04g18685 Brassica carinata HOM05D005009 ORTHO05D006203 7.2e-93 344.7 189 86.2
CDE08G1579 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 7.2e-93 344.7 189 86.8
Sabra03G0144600 Salix brachista HOM05D005009 ORTHO05D006203 7.2e-93 344.7 201 84.1
unitig_22.g5330 Utricularia gibba HOM05D005009 ORTHO05D006203 1.2e-92 344.0 193 87.0
BcaC01g04053 Brassica carinata HOM05D005009 ORTHO05D006203 2.1e-92 343.2 189 85.2
BolC3t16835H Brassica oleracea HOM05D005009 ORTHO05D006203 2.1e-92 343.2 188 86.2
Ca_24007_v3 Cicer arietinum L. HOM05D005009 ORTHO05D006203 2.1e-92 343.2 188 86.7
CsaV3_5G036940 Cucumis sativus L. HOM05D005009 ORTHO05D006203 2.7e-92 342.8 189 86.2
GSVIVG01028667001 Vitis vinifera HOM05D005009 ORTHO05D006203 2.7e-92 342.8 188 87.8
A03p37590 Brassica napus HOM05D005009 ORTHO05D006203 3.5e-92 342.4 191 84.8
C01p53010 Brassica napus HOM05D005009 ORTHO05D006203 6.1e-92 341.7 188 85.6
C03p45580 Brassica napus HOM05D005009 ORTHO05D006203 7.9e-92 341.3 188 85.1
Mapoly0109s0062 Marchantia polymorpha HOM05D005009 ORTHO05D006203 1.8e-91 340.1 189 83.1
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea HOM05D005009 ORTHO05D006203 3.0e-91 339.3 210 80.0
ClCG05G027020 Citrullus lanatus HOM05D005009 ORTHO05D006203 3.9e-91 339.0 189 85.2
BolC1t05245H Brassica oleracea HOM05D005009 ORTHO05D006203 5.1e-91 338.6 188 85.1
Rhsim07G0069300 Rhododendron simsii HOM05D005009 ORTHO05D006203 8.7e-91 337.8 216 77.8
A06p13990 Brassica napus HOM05D005009 ORTHO05D006203 1.1e-90 337.4 188 85.1
CANSAT01G2494 Cannabis sativa HOM05D005009 ORTHO05D006203 3.3e-90 335.9 190 84.2
MELO3C034019.2 Cucumis melo HOM05D005009 ORTHO05D006203 3.3e-90 335.9 196 83.2
Ah.01g018000 Amaranthus hybridus HOM05D005009 ORTHO05D006203 5.7e-90 335.1 183 87.4
Hund13390 Selenicereus undatus HOM05D005009 ORTHO05D006203 9.7e-90 334.3 188 85.1
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis HOM05D005009 ORTHO05D006203 2.2e-89 333.2 189 82.0
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 8.2e-89 331.3 205 76.1
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea HOM05D005009 ORTHO05D006203 3.1e-88 329.3 230 73.5
Sed0026819 Sechium edule HOM05D005009 ORTHO05D006203 4.1e-88 328.9 216 76.4
SMO137G0355 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 3.4e-87 325.9 189 78.8
Cre07.g351650 Chlamydomonas reinhardtii HOM05D005009 ORTHO05D006203 4.5e-87 325.5 191 79.1
PRCOL_00001494 Prasinoderma coloniale HOM05D005009 ORTHO05D006203 1.0e-86 324.3 189 79.9
Aa31LG3G6530 Aethionema arabicum HOM05D005009 ORTHO05D006203 5.5e-85 318.5 189 80.4
Peaxi162Scf00220g00315 Petunia axillaris HOM05D005009 ORTHO05D006203 5.5e-85 318.5 173 88.4
MCO01G737 Micromonas commoda HOM05D005009 ORTHO05D006203 1.2e-84 317.4 191 77.0
Os09g0510200 Oryza sativa ssp. japonica HOM05D005009 ORTHO05D006203 8.8e-83 311.2 171 84.8
vmacro21942 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 1.1e-82 310.8 181 83.4
vmacro23458 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 1.1e-82 310.8 181 83.4
SMO137G0211 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 3.3e-82 309.3 188 75.5
Pp3c7_7130 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.7e-81 307.0 188 74.5
VMungo1127G1850 Vigna mungo HOM05D005009 ORTHO05D006203 3.8e-78 295.8 167 84.4
Cpa.g.sc82.9 Carica papaya HOM05D005009 ORTHO05D006203 1.1e-77 294.3 159 86.8
CSS0003702 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 1.4e-77 293.9 159 87.4
SHI34551 Sapria himalayana HOM05D005009 ORTHO05D006203 3.6e-76 289.3 160 85.6
Lj9A658G62 Lonicera japonica HOM05D005009 ORTHO05D006203 2.4e-72 276.6 172 78.5
Glyma.13G184700 Glycine max HOM05D005009 ORTHO05D006203 1.6e-71 273.9 161 82.0
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 4.2e-69 265.8 208 66.3
Haze_26638 Corylus avellana HOM05D005009 ORTHO05D006203 2.7e-68 263.1 188 67.6
Pp3c25_460 Physcomitrium patens HOM05D005009 ORTHO05D006203 2.5e-61 240.0 188 63.3
Sed0013386 Sechium edule HOM05D005009 ORTHO05D006203 1.5e-58 230.7 140 80.0
SMO232G0039 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 9.8e-58 228.0 183 59.6
SMO352G0037 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 2.7e-55 219.9 206 51.9
HPP92_011758 Vanilla planifolia HOM05D005009 ORTHO05D006203 2.2e-54 216.9 148 72.3
CDE08G0779 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 8.5e-54 214.9 112 89.3
Glyma.13G188400 Glycine max HOM05D005009 ORTHO05D006203 1.4e-51 207.6 163 69.9
Oeu064146.2 Olea europaea HOM05D005009 ORTHO05D006203 2.6e-50 203.4 112 85.7
BraA03t12913Z Brassica rapa HOM05D005009 ORTHO05D006203 3.4e-50 203.0 106 86.8
HPP92_011756 Vanilla planifolia HOM05D005009 ORTHO05D006203 3.4e-50 203.0 109 89.9
Nitab4.5_0004168g0130 Nicotiana tabacum HOM05D005009 ORTHO05D006203 2.4e-48 196.8 111 86.5
MD02G1276800 Malus domestica HOM05D005009 ORTHO05D006203 7.0e-48 195.3 109 87.2
ClCG05G014250 Citrullus lanatus HOM05D005009 ORTHO05D006203 6.6e-46 188.7 158 61.4
Actinidia07967 Actinidia chinensis HOM05D005009 ORTHO05D006203 1.9e-37 160.6 80 90.0
Cfa001149 Carpinus fangiana HOM05D005009 ORTHO05D006203 5.6e-37 159.1 80 90.0
MD02G1276900 Malus domestica HOM05D005009 ORTHO05D006203 9.5e-37 158.3 80 88.8
Glyma.13G192001 Glycine max HOM05D005009 ORTHO05D006203 2.1e-36 157.1 82 87.8
HPP92_011747 Vanilla planifolia HOM05D005009 ORTHO05D006203 8.0e-36 155.2 81 86.4
Pp3c6_12450 Physcomitrium patens HOM05D005009 ORTHO05D006203 9.8e-34 148.3 157 47.8
Glyma.13G188051 Glycine max HOM05D005009 ORTHO05D006203 2.2e-33 147.1 84 85.7
Glyma.13G190100 Glycine max HOM05D005009 ORTHO05D006203 2.7e-31 140.2 74 86.5
Sc11g0006340 Simmondsia chinensis HOM05D005009 ORTHO05D006203 4.6e-31 139.4 79 86.1
CARHR086850 Cardamine hirsuta HOM05D005009 ORTHO05D006203 1.3e-30 137.9 71 87.3
MD07G1044300 Malus domestica HOM05D005009 ORTHO05D006203 7.3e-29 132.1 69 87.0
BcaC09g48229 Brassica carinata HOM05D005009 ORTHO05D006203 5.8e-26 122.5 68 82.4
C01p53030 Brassica napus HOM05D005009 ORTHO05D006203 5.8e-26 122.5 68 82.4
Prupe.3G123900 Prunus persica HOM05D005009 ORTHO05D006203 7.5e-26 122.1 87 74.7
BolC1t05246H Brassica oleracea HOM05D005009 ORTHO05D006203 1.7e-25 120.9 68 80.9
Manes.04G156350 Manihot esculenta HOM05D005009 ORTHO05D006203 1.9e-16 90.9 51 76.5
arahy.Tifrunner.gnm1.ann1.WDN55T Arachis hypogaea HOM05D000001 ORTHO05D009381 1.2e-15 88.2 47 80.9
A03p22660 Brassica napus HOM05D005009 ORTHO05D033042 2.4e-11 73.9 38 84.2
A10p02030 Brassica napus HOM05D005009 ORTHO05D006203 2.4e-11 73.9 38 84.2
C03p63540 Brassica napus HOM05D005009 ORTHO05D033042 2.4e-11 73.9 38 84.2
BraA02t08111Z Brassica rapa HOM05D005009 ORTHO05D033042 2.4e-11 73.9 38 84.2
A01p39420 Brassica napus HOM05D005009 ORTHO05D006203 3.1e-11 73.6 37 86.5

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (9 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (6 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (4 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (4 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings