Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 3.8e-252 874.4 453 100.0
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 6.2e-194 681.0 463 74.7
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 1.2e-189 666.8 433 76.0
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 4.4e-176 621.7 379 78.6
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.4e-145 520.4 438 58.7
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 4.1e-145 518.8 429 60.4
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 1.3e-143 513.8 440 60.0
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 1.7e-143 513.5 435 58.4
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 3.0e-140 502.7 440 56.8
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.8e-138 496.1 430 57.4
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 8.2e-138 494.6 447 56.6
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.1e-137 494.2 437 56.1
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.8e-137 493.4 425 58.8
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 3.1e-137 492.7 474 54.4
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 5.9e-136 488.4 432 56.9
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 8.5e-135 484.6 438 56.4
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 1.1e-134 484.2 434 54.4
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 3.2e-134 482.6 434 55.5
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 9.4e-134 481.1 434 54.8
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.2e-133 480.7 430 56.5
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 2.1e-133 479.9 441 54.6
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 4.7e-133 478.8 434 54.4
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 6.1e-133 478.4 434 53.7
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 5.1e-132 475.3 445 54.8
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 6.7e-132 474.9 434 55.1
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 8.8e-132 474.6 442 56.6
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 7.4e-131 471.5 446 54.9
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 6.3e-130 468.4 438 54.3
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 7.0e-129 464.9 434 53.9
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 2.6e-128 463.0 397 58.2
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 4.5e-128 462.2 432 52.3
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 1.3e-127 460.7 388 60.1
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 1.7e-127 460.3 437 53.5
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 2.9e-127 459.5 444 52.9
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 3.8e-127 459.1 480 50.2
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 5.0e-127 458.8 432 55.6
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 8.5e-127 458.0 392 57.4
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 9.4e-126 454.5 433 52.0
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 9.4e-126 454.5 443 52.8
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 2.7e-125 453.0 439 52.6
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 2.7e-125 453.0 431 52.0
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 1.0e-124 451.1 439 52.6
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 3.0e-124 449.5 440 53.0
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 5.2e-124 448.7 436 52.3
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 5.2e-124 448.7 438 51.4
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 8.8e-124 448.0 431 52.7
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 2.0e-123 446.8 391 57.8
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.7e-123 445.3 431 50.8
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 2.2e-122 443.4 443 52.6
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 2.2e-122 443.4 420 52.9
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 2.8e-122 443.0 440 52.0
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 3.7e-122 442.6 386 56.0
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 6.3e-122 441.8 439 51.7
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 8.2e-122 441.4 438 50.5
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 8.2e-122 441.4 431 50.6
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 8.2e-122 441.4 440 52.3
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 1.1e-121 441.0 438 50.9
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.1e-121 441.0 431 50.3
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 1.8e-121 440.3 392 56.9
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.4e-121 439.9 439 50.3
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 5.3e-121 438.7 440 51.6
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 9.1e-121 438.0 421 53.4
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 9.1e-121 438.0 442 52.5
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 1.2e-120 437.6 437 49.7
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 2.6e-120 436.4 444 51.8
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 1.3e-119 434.1 437 52.4
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 2.9e-119 433.0 440 50.9
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 5.0e-119 432.2 384 56.2
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 1.1e-118 431.0 445 52.4
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 1.5e-118 430.6 440 50.7
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 1.5e-118 430.6 436 52.3
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 4.2e-118 429.1 440 50.7
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 6.1e-117 425.2 440 50.5
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 2.3e-116 423.3 440 50.2
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 2.3e-116 423.3 440 50.2
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 3.0e-116 422.9 436 51.6
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 4.0e-116 422.5 421 50.1
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 4.0e-116 422.5 513 45.6
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 3.3e-115 419.5 382 55.0
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.3e-114 417.5 430 47.7
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 7.0e-113 411.8 439 49.9
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 9.1e-113 411.4 449 51.0
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.2e-112 411.0 386 53.6
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 2.7e-112 409.8 434 49.8
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 1.7e-111 407.1 385 54.3
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.5e-110 402.1 381 52.2
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 5.4e-105 385.6 498 43.2
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 1.3e-103 380.9 388 49.5
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 1.6e-101 374.0 386 51.8
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 3.6e-101 372.9 449 45.9
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.8e-100 370.5 438 47.5
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 2.0e-99 367.1 409 48.2
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 2.7e-96 356.7 433 46.7
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 7.8e-96 355.1 435 44.8
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 2.9e-95 353.2 359 50.4
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 2.1e-93 347.1 446 44.6
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 8.0e-93 345.1 448 43.5
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 2.6e-91 340.1 450 43.8
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 5.8e-91 339.0 441 44.0
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 7.5e-91 338.6 393 48.1
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 3.2e-89 333.2 438 44.7
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 3.0e-87 326.6 445 43.4
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 7.3e-86 322.0 435 44.4
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 1.2e-85 321.2 435 41.4
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 1.6e-85 320.9 330 48.8
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 6.2e-85 318.9 440 43.0
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 6.2e-85 318.9 448 42.9
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 1.4e-84 317.8 435 41.1
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 3.1e-84 316.6 289 55.7
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 4.4e-83 312.8 345 48.7
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 5.8e-83 312.4 420 41.0
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 7.8e-80 302.0 441 37.9
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.7e-79 300.8 435 37.2
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 1.1e-78 298.1 452 41.4
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.1e-77 293.9 454 37.2
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 2.3e-76 290.4 434 37.8
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 1.2e-75 288.1 400 41.8
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.2e-72 278.1 434 36.2
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 5.8e-67 259.2 279 50.9
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 1.0e-63 248.4 355 41.4
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.4e-60 237.3 453 34.7
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.3e-58 231.5 385 35.3
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 1.0e-47 195.3 408 29.9
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 2.1e-45 187.6 295 39.0
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 6.9e-28 129.4 128 46.9
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.2e-24 118.6 148 46.6
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.3e-13 79.7 76 51.3
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 2.0e-11 74.7 52 69.2
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 1.7e-10 71.6 51 64.7
Lj1C795T1 Lonicera japonica HOM05D005756 ORTHO05D018916 5.0e-10 70.1 52 65.4
Dinv21288 Davidia involucrata HOM05D005756 ORTHO05D018916 2.5e-09 67.8 72 50.0
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 9.4e-09 65.9 51 64.7
DCAR_019685 Daucus carota HOM05D005756 ORTHO05D018916 6.1e-08 63.2 60 53.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (3 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (5 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (5 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (5 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings