Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
HanXRQChr11g0325851	Helianthus annuus	HOM05D002762	ORTHO05D004643	5.7e-52	207.2	98	100.0
HanXRQChr11g0325861	Helianthus annuus	HOM05D002762	ORTHO05D004643	2.4e-34	148.7	80	88.8
HanXRQChr08g0226481	Helianthus annuus	HOM05D002762	ORTHO05D004643	2.2e-32	142.1	78	87.2
Lsat_1_v5_gn_5_47620	Lactuca sativa	HOM05D002762	ORTHO05D004643	5.3e-26	120.9	73	79.5
ECA240G4644	Erigeron canadensis	HOM05D002762	ORTHO05D004643	5.9e-25	117.5	73	76.7
HanXRQChr03g0079911	Helianthus annuus	HOM05D002762	ORTHO05D004643	3.8e-24	114.8	72	75.0
GSVIVG01017859001	Vitis vinifera	HOM05D002762	ORTHO05D004643	1.5e-23	112.8	76	68.4
DCAR_030582	Daucus carota	HOM05D002762	ORTHO05D004643	4.2e-23	111.3	77	70.1
Dinv38356	Davidia involucrata	HOM05D002762	ORTHO05D008831	5.5e-23	110.9	72	72.2
arahy.Tifrunner.gnm1.ann1.L75CTN	Arachis hypogaea	HOM05D002762	ORTHO05D004643	1.2e-22	109.8	85	64.7
CSS0044156	Camellia sinensis var. sinensis	HOM05D002762	ORTHO05D004643	2.7e-22	108.6	73	68.5
arahy.Tifrunner.gnm1.ann1.Q6K1JG	Arachis hypogaea	HOM05D002762	ORTHO05D004643	4.7e-22	107.8	72	72.2
Actinidia23462	Actinidia chinensis	HOM05D002762	ORTHO05D004643	6.1e-22	107.5	73	68.5
Lj3C805G9	Lonicera japonica	HOM05D002762	ORTHO05D004643	6.1e-22	107.5	73	69.9
arahy.Tifrunner.gnm1.ann1.6S26PP	Arachis hypogaea	HOM05D002762	ORTHO05D004643	1.0e-21	106.7	72	70.8
arahy.Tifrunner.gnm1.ann1.EJ0XN1	Arachis hypogaea	HOM05D002762	ORTHO05D004643	1.0e-21	106.7	74	68.9
MSTRG.3976	Avicennia marina	HOM05D002762	ORTHO05D004643	1.8e-21	105.9	73	69.9
CiPaw.01G157300	Carya illinoinensis	HOM05D002762	ORTHO05D004643	2.3e-21	105.5	78	66.7
SalBow2G0360	Salvia bowleyana	HOM05D002762	ORTHO05D004643	2.3e-21	105.5	73	68.5
SalBow2G3267	Salvia bowleyana	HOM05D002762	ORTHO05D004643	2.3e-21	105.5	73	68.5
CARHR222230	Cardamine hirsuta	HOM05D002762	ORTHO05D004643	3.0e-21	105.1	84	61.9
Sc19g0004700	Simmondsia chinensis	HOM05D002762	ORTHO05D004643	3.0e-21	105.1	72	68.1
Actinidia40216	Actinidia chinensis	HOM05D002762	ORTHO05D004643	4.0e-21	104.8	72	69.4
vmacro08247	Vaccinium macrocarpon	HOM05D002762	ORTHO05D004643	4.0e-21	104.8	73	67.1
Thhalv10024700m.g	Eutrema salsugineum	HOM05D002762	ORTHO05D004643	5.2e-21	104.4	76	64.5
Nitab4.5_0002594g0070	Nicotiana tabacum	HOM05D002762	ORTHO05D004643	5.2e-21	104.4	88	58.0
Solyc06g054430.1	Solanum lycopersicum	HOM05D002762	ORTHO05D004643	5.2e-21	104.4	82	61.0
BolC7t45238H	Brassica oleracea	HOM05D002762	ORTHO05D004643	6.7e-21	104.0	72	66.7
Carub.0007s2643	Capsella rubella	HOM05D002762	ORTHO05D004643	6.7e-21	104.0	72	66.7
Cc03_g02820	Coffea canephora	HOM05D002762	ORTHO05D004643	6.7e-21	104.0	77	67.5
Migut.G00244	Erythranthe guttata	HOM05D002762	ORTHO05D004643	6.7e-21	104.0	73	67.1
Migut.G00246	Erythranthe guttata	HOM05D002762	ORTHO05D004643	6.7e-21	104.0	73	67.1
Sopen06g019510	Solanum pennellii	HOM05D002762	ORTHO05D004643	6.7e-21	104.0	86	59.3
PGSC0003DMG400030790	Solanum tuberosum	HOM05D002762	ORTHO05D004643	6.7e-21	104.0	86	59.3
A03p49130	Brassica napus	HOM05D002762	ORTHO05D004643	8.8e-21	103.6	72	66.7
BraA03t14008Z	Brassica rapa	HOM05D002762	ORTHO05D004643	8.8e-21	103.6	72	66.7
Nitab4.5_0002295g0030	Nicotiana tabacum	HOM05D002762	ORTHO05D004643	8.8e-21	103.6	73	64.4
Rhsim04G0212100	Rhododendron simsii	HOM05D002762	ORTHO05D004643	8.8e-21	103.6	79	59.5
Sp7g13700	Schrenkiella parvula	HOM05D002762	ORTHO05D004643	8.8e-21	103.6	72	69.4
Aa31LG9G1950	Aethionema arabicum	HOM05D002762	ORTHO05D004643	1.1e-20	103.2	72	68.1
AL7G40070	Arabidopsis lyrata	HOM05D002762	ORTHO05D004643	1.1e-20	103.2	72	65.3
Cfa015545	Carpinus fangiana	HOM05D002762	ORTHO05D004643	1.1e-20	103.2	78	64.1
Haze_01003	Corylus avellana	HOM05D002762	ORTHO05D004643	1.1e-20	103.2	78	64.1
THA.LOC104802549	Tarenaya hassleriana	HOM05D002762	ORTHO05D004643	1.5e-20	102.8	92	56.5
Atru.chr4.2693	Acer truncatum	HOM05D002762	ORTHO05D004643	2.0e-20	102.4	72	66.7
BcaC06g33410	Brassica carinata	HOM05D002762	ORTHO05D004643	2.0e-20	102.4	72	65.3
C07p47170	Brassica napus	HOM05D002762	ORTHO05D004643	2.0e-20	102.4	72	65.3
ClCG06G005660	Citrullus lanatus	HOM05D002762	ORTHO05D004643	2.0e-20	102.4	72	66.7
MELO3C021388.2	Cucumis melo	HOM05D002762	ORTHO05D004643	2.0e-20	102.4	73	65.8
CsaV3_6G005490	Cucumis sativus L.	HOM05D002762	ORTHO05D004643	2.0e-20	102.4	73	65.8
Lj6g0020038	Lotus japonicus	HOM05D002762	ORTHO05D004643	2.0e-20	102.4	76	64.5
CAN.G1247.4	Capsicum annuum	HOM05D002762	ORTHO05D004643	2.6e-20	102.1	73	61.6
Phvul.006G157700	Phaseolus vulgaris	HOM05D002762	ORTHO05D004643	2.6e-20	102.1	73	65.8
TAR362G1268	Trochodendron aralioides	HOM05D002762	ORTHO05D004643	3.3e-20	101.7	77	63.6
VMungo0540G1770	Vigna mungo	HOM05D002762	ORTHO05D004643	3.3e-20	101.7	73	64.4
AT4G15475	Arabidopsis thaliana	HOM05D002762	ORTHO05D004643	4.4e-20	101.3	72	63.9
CANSAT78G1359	Cannabis sativa	HOM05D002762	ORTHO05D004643	5.7e-20	100.9	72	63.9
RcHm_v2.0_Chr4g0419291	Rosa chinensis	HOM05D002762	ORTHO05D004643	7.4e-20	100.5	72	63.9
Sed0001779	Sechium edule	HOM05D002762	ORTHO05D004643	7.4e-20	100.5	73	63.0
TWI73G1094	Tripterygium wilfordii	HOM05D002762	ORTHO05D004643	7.4e-20	100.5	72	63.9
Psat1g185320	Pisum sativum	HOM05D002762	ORTHO05D004643	9.7e-20	100.1	72	65.3
Ca_00594_v3	Cicer arietinum L.	HOM05D002762	ORTHO05D004643	1.3e-19	99.8	72	65.3
Hma1.2p1_0511F.1_g169210	Hydrangea macrophylla	HOM05D002762	ORTHO05D004643	1.7e-19	99.4	74	66.2
MD13G1179300	Malus domestica	HOM05D002762	ORTHO05D004643	2.2e-19	99.0	87	56.3
PGR031G1661	Punica granatum	HOM05D002762	ORTHO05D004643	2.2e-19	99.0	88	56.8
Duzib052G0700	Durio zibethinus	HOM05D002762	ORTHO05D004643	2.8e-19	98.6	72	63.9
Hma1.2p1_2025F.1_g311500	Hydrangea macrophylla	HOM05D002762	ORTHO05D004643	2.8e-19	98.6	74	66.2
Manes.03G187500	Manihot esculenta	HOM05D002762	ORTHO05D004643	3.7e-19	98.2	76	61.8
Glyma.13G211600	Glycine max	HOM05D002762	ORTHO05D004643	4.8e-19	97.8	73	61.6
Peaxi162Scf00769g00116	Petunia axillaris	HOM05D002762	ORTHO05D004643	4.8e-19	97.8	86	57.0
Lalb_Chr20g0118281	Lupinus albus	HOM05D002762	ORTHO05D004643	6.3e-19	97.4	76	56.6
TPR.G18042	Trifolium pratense	HOM05D002762	ORTHO05D004643	6.3e-19	97.4	72	63.9
BcaC06g32936	Brassica carinata	HOM05D002762	ORTHO05D004643	8.2e-19	97.1	72	65.3
COL.COLO4_13978	Corchorus olitorius	HOM05D002762	ORTHO05D004643	8.2e-19	97.1	79	58.2
Gohir.D09G232700	Gossypium hirsutum	HOM05D002762	ORTHO05D004643	8.2e-19	97.1	72	62.5
Gorai.006G255600	Gossypium raimondii	HOM05D002762	ORTHO05D004643	8.2e-19	97.1	72	62.5
SGA_v2.0_scaffold237G43847	Striga asiatica	HOM05D002762	ORTHO05D004643	1.1e-18	96.7	74	60.8
MD16G1180300	Malus domestica	HOM05D002762	ORTHO05D004643	1.4e-18	96.3	76	60.5
Medtr2g021030	Medicago truncatula	HOM05D002762	ORTHO05D004643	1.4e-18	96.3	72	62.5
Duzib151G0782	Durio zibethinus	HOM05D002762	ORTHO05D004643	1.8e-18	95.9	79	58.2
Thecc.04G271300	Theobroma cacao	HOM05D002762	ORTHO05D004643	1.8e-18	95.9	79	59.5
QL06p006068	Quercus lobata	HOM05D002762	ORTHO05D004643	2.4e-18	95.5	78	60.3
Gohir.A09G231600	Gossypium hirsutum	HOM05D002762	ORTHO05D004643	4.1e-18	94.7	72	61.1
Eucgr.B01185	Eucalyptus grandis	HOM05D002762	ORTHO05D004643	5.3e-18	94.4	72	59.7
FvH4_4g14060	Fragaria vesca	HOM05D002762	ORTHO05D004643	5.3e-18	94.4	72	62.5
FAN12G3553	Fragaria x ananassa	HOM05D002762	ORTHO05D004643	5.3e-18	94.4	72	62.5
Cpa.g.c35915	Carica papaya	HOM05D002762	ORTHO05D004643	7.0e-18	94.0	74	55.4
TWI09G0048	Tripterygium wilfordii	HOM05D002762	ORTHO05D004643	7.0e-18	94.0	72	59.7
FAN17G2967	Fragaria x ananassa	HOM05D002762	ORTHO05D004643	1.2e-17	93.2	72	61.1
Prupe.1G147900	Prunus persica	HOM05D002762	ORTHO05D004643	1.2e-17	93.2	72	59.7
Aqoxy2G03201	Aquilegia oxysepala	HOM05D002762	ORTHO05D004643	2.0e-17	92.4	89	53.9
Nn4g26135	Nelumbo nucifera	HOM05D002762	ORTHO05D004643	4.5e-17	91.3	87	54.0
FAN22G0648	Fragaria x ananassa	HOM05D002762	ORTHO05D004643	7.7e-17	90.5	72	58.3
MBI19_g20287_MAGBIO	Magnolia biondii	HOM05D002762	ORTHO05D004643	2.9e-16	88.6	79	58.2
CDE05G1517	Ceratophyllum demersum	HOM05D002762	ORTHO05D004643	6.5e-16	87.4	88	51.1
Glyma.17G019800	Glycine max	HOM05D002762	ORTHO05D004643	4.2e-15	84.7	73	56.2
Phvul.003G097600	Phaseolus vulgaris	HOM05D002762	ORTHO05D004643	7.2e-15	84.0	78	53.8
PSO302G0133	Papaver somniferum	HOM05D002762	ORTHO05D004643	9.4e-15	83.6	80	51.2
PSO170G0016	Papaver somniferum	HOM05D002762	ORTHO05D004643	2.1e-14	82.4	75	53.3
VMungo1215G0792	Vigna mungo	HOM05D002762	ORTHO05D004643	2.1e-14	82.4	74	54.1
ATR0626G340	Amborella trichopoda	HOM05D002762	ORTHO05D004643	2.7e-14	82.0	73	53.4
CSS0038196	Camellia sinensis var. sinensis	HOM05D002762	ORTHO05D004643	3.6e-14	81.6	91	48.4
SEGI_13295	Sequoiadendron giganteum	HOM05D002762	ORTHO05D004643	3.7e-11	71.6	74	45.9
Dinv44461	Davidia involucrata	HOM05D002762	ORTHO05D004643	1.8e-10	69.3	44	70.5
AagrBONN_evm.TU.Sc2ySwM_117.2600	Anthoceros agrestis	HOM05D002762	ORTHO05D004643	4.1e-10	68.2	82	40.2
HPP92_016898	Vanilla planifolia	HOM05D000144	ORTHO05D004643	2.0e-09	65.9	72	48.6
Zm00001eb115300	Zea mays	HOM05D002762	ORTHO05D004643	1.7e-08	62.8	76	44.7
SMO228G0132	Selaginella moellendorffii	HOM05D002762	ORTHO05D004643	3.8e-08	61.6	71	40.8
Os11g0641200	Oryza sativa ssp. japonica	HOM05D002762	ORTHO05D004643	6.1e-06	54.3	77	36.4

External Sequences (optional)

External Sequences Type

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MSA algorithm

Tree construction algorithm

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Interactive Phylogenetics Module

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