Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0325151 Helianthus annuus HOM05D004905 ORTHO05D005456 6.5e-211 737.6 530 100.0
HanXRQChr09g0262681 Helianthus annuus HOM05D004905 ORTHO05D005456 2.7e-124 449.9 547 63.4
ECA232G5032 Erigeron canadensis HOM05D004905 ORTHO05D005456 3.4e-103 379.8 542 59.4
Lsat_1_v5_gn_2_80961 Lactuca sativa HOM05D004905 ORTHO05D005456 6.8e-75 285.8 527 40.8
Lsat_1_v5_gn_4_155561 Lactuca sativa HOM05D004905 ORTHO05D005456 2.4e-72 277.3 527 44.2
ECA238G0899 Erigeron canadensis HOM05D004905 ORTHO05D005456 1.5e-66 258.1 494 38.1
Ciclev10011170m.g Citrus clementina HOM05D004905 ORTHO05D005456 1.7e-62 244.6 567 40.9
DCAR_010704 Daucus carota HOM05D004905 ORTHO05D005456 3.8e-62 243.4 563 36.6
Atru.chr1.1616 Acer truncatum HOM05D004905 ORTHO05D005456 5.6e-61 239.6 570 46.1
TAR426G0001 Trochodendron aralioides HOM05D004905 ORTHO05D005456 9.5e-61 238.8 560 38.8
TAR535G0011 Trochodendron aralioides HOM05D004905 ORTHO05D005456 2.1e-60 237.7 561 40.8
Aqoxy3G04036 Aquilegia oxysepala HOM05D004905 ORTHO05D005456 2.8e-60 237.3 548 39.1
Dinv33966 Davidia involucrata HOM05D001288 ORTHO05D005456 3.0e-59 233.8 557 47.2
QL04p012071 Quercus lobata HOM05D004905 ORTHO05D005456 1.5e-58 231.5 572 34.4
QL02p050316 Quercus lobata HOM05D004905 ORTHO05D005456 3.4e-58 230.3 572 35.5
Potri.004G095800 Populus trichocarpa HOM05D004905 ORTHO05D005456 9.8e-58 228.8 568 40.0
Eucgr.F02791 Eucalyptus grandis HOM05D004905 ORTHO05D005456 1.3e-57 228.4 573 36.3
Migut.H00239 Erythranthe guttata HOM05D004905 ORTHO05D005456 1.4e-56 224.9 551 43.7
Oeu030795.1 Olea europaea HOM05D004905 ORTHO05D005456 4.1e-56 223.4 542 33.6
Nn4g23955 Nelumbo nucifera HOM05D004905 ORTHO05D005456 5.4e-56 223.0 560 45.9
Potri.017G118900 Populus trichocarpa HOM05D004905 ORTHO05D005456 7.0e-56 222.6 573 35.1
Prupe.3G148500 Prunus persica HOM05D004905 ORTHO05D005456 1.2e-55 221.9 571 45.2
TWI53G1125 Tripterygium wilfordii HOM05D004905 ORTHO05D005456 2.7e-55 220.7 540 35.4
MSTRG.23594 Avicennia marina HOM05D004905 ORTHO05D005456 1.7e-54 218.0 535 41.5
Haze_14185 Corylus avellana HOM05D004905 ORTHO05D005456 3.0e-54 217.2 565 35.0
Glyma.18G294100 Glycine max HOM05D004905 ORTHO05D005456 5.0e-54 216.5 568 44.2
COL.COLO4_09375 Corchorus olitorius HOM05D004905 ORTHO05D005456 6.6e-54 216.1 552 34.1
Cfa007892 Carpinus fangiana HOM05D004905 ORTHO05D005456 8.6e-54 215.7 577 36.2
Lj4P184T26 Lonicera japonica HOM05D004905 ORTHO05D005456 1.1e-53 215.3 471 43.3
Ca_08091_v3 Cicer arietinum L. HOM05D004905 ORTHO05D005456 1.9e-53 214.5 565 33.6
Duzib138G0198 Durio zibethinus HOM05D004905 ORTHO05D005456 2.5e-53 214.2 567 33.2
Medtr7g082660 Medicago truncatula HOM05D004905 ORTHO05D005456 6.2e-52 209.5 563 33.4
VMungo1383G0301 Vigna mungo HOM05D004905 ORTHO05D005456 8.0e-52 209.1 566 45.6
arahy.Tifrunner.gnm1.ann1.00EJBM Arachis hypogaea HOM05D004905 ORTHO05D005456 2.3e-51 207.6 542 39.1
arahy.Tifrunner.gnm1.ann1.VL1078 Arachis hypogaea HOM05D004905 ORTHO05D005456 2.3e-51 207.6 542 39.1
RcHm_v2.0_Chr2g0123711 Rosa chinensis HOM05D004905 ORTHO05D005456 2.3e-51 207.6 566 40.8
HanXRQChr12g0357381 Helianthus annuus HOM05D004905 ORTHO05D005456 5.2e-51 206.5 509 43.2
Sabra17G0098200 Salix brachista HOM05D004905 ORTHO05D005456 1.5e-50 204.9 573 31.9
Psat3g097720 Pisum sativum HOM05D004905 ORTHO05D005456 2.6e-50 204.1 566 32.9
FAN28G0686 Fragaria x ananassa HOM05D004905 ORTHO05D005456 5.8e-50 203.0 571 43.8
FAN26G1687 Fragaria x ananassa HOM05D004905 ORTHO05D005456 7.5e-50 202.6 571 43.6
TPR.G16546 Trifolium pratense HOM05D004905 ORTHO05D005456 7.5e-50 202.6 555 32.4
Actinidia15900 Actinidia chinensis HOM05D004905 ORTHO05D005456 9.8e-50 202.2 490 40.4
Lj1g0028143 Lotus japonicus HOM05D004905 ORTHO05D005456 4.9e-49 199.9 561 44.4
CANSAT11G1581 Cannabis sativa HOM05D004905 ORTHO05D005456 1.4e-48 198.4 564 36.0
CSS0040498 Camellia sinensis var. sinensis HOM05D004905 ORTHO05D005456 4.1e-48 196.8 507 33.7
FvH4_1g25551 Fragaria vesca HOM05D004905 ORTHO05D005456 4.1e-48 196.8 571 44.1
FAN19G0313 Fragaria x ananassa HOM05D004905 ORTHO05D005456 4.1e-48 196.8 571 44.1
Thecc.04G128800 Theobroma cacao HOM05D004905 ORTHO05D005456 7.8e-47 192.6 564 37.9
Lalb_Chr10g0091451 Lupinus albus HOM05D004905 ORTHO05D005456 1.0e-46 192.2 555 38.0
Nn3g17953 Nelumbo nucifera HOM05D004905 ORTHO05D005456 5.6e-45 186.4 544 37.5
TWI74G1312 Tripterygium wilfordii HOM05D004905 ORTHO05D005456 5.6e-45 186.4 474 32.9
Peaxi162Scf00877g00001 Petunia axillaris HOM05D004905 ORTHO05D005456 1.2e-44 185.3 555 38.0
Solyc02g086350.3 Solanum lycopersicum HOM05D004905 ORTHO05D005456 2.1e-44 184.5 564 31.2
SGA_v2.0_scaffold202G41468 Striga asiatica HOM05D004905 ORTHO05D005456 4.7e-44 183.3 545 33.6
Hma1.2p1_0500F.1_g167210 Hydrangea macrophylla HOM05D004905 ORTHO05D005456 8.1e-44 182.6 473 49.7
MD09G1256700 Malus domestica HOM05D004905 ORTHO05D005456 1.1e-43 182.2 554 43.9
VMungo0464G1170 Vigna mungo HOM05D004905 ORTHO05D005456 1.4e-43 181.8 531 33.5
Lalb_Chr04g0257631 Lupinus albus HOM05D004905 ORTHO05D005456 4.0e-43 180.3 571 30.8
Manes.02G071500 Manihot esculenta HOM05D004905 ORTHO05D005456 2.6e-42 177.6 504 44.4
Nitab4.5_0000753g0160 Nicotiana tabacum HOM05D004905 ORTHO05D005456 2.6e-42 177.6 491 34.0
Glyma.02G089100 Glycine max HOM05D001288 ORTHO05D001123 3.7e-41 173.7 534 43.3
Gohir.D11G172100 Gossypium hirsutum HOM05D004905 ORTHO05D005456 8.3e-41 172.6 539 37.8
DCAR_011263 Daucus carota HOM05D004905 ORTHO05D005456 2.4e-40 171.0 545 29.9
Nitab4.5_0011439g0010 Nicotiana tabacum HOM05D004905 ORTHO05D005456 2.4e-40 171.0 497 30.8
Rhsim10G0072700 Rhododendron simsii HOM05D004905 ORTHO05D005456 7.1e-40 169.5 566 42.0
Gorai.007G184500 Gossypium raimondii HOM05D004905 ORTHO05D005456 9.2e-40 169.1 539 37.5
arahy.Tifrunner.gnm1.ann1.NNR4KN Arachis hypogaea HOM05D004905 ORTHO05D005456 1.2e-39 168.7 560 36.1
CDE02G1873 Ceratophyllum demersum HOM05D004905 ORTHO05D005456 1.2e-39 168.7 459 35.5
HanXRQChr07g0190621 Helianthus annuus HOM05D004905 ORTHO05D005456 1.2e-39 168.7 498 39.8
vmacro22954 Vaccinium macrocarpon HOM05D004905 ORTHO05D005456 2.1e-39 167.9 564 37.4
arahy.Tifrunner.gnm1.ann1.98PLAU Arachis hypogaea HOM05D004905 ORTHO05D005456 2.7e-39 167.5 560 36.1
EL10Ac2g04529 Beta vulgaris HOM05D004905 ORTHO05D005456 3.5e-39 167.2 529 37.1
CiPaw.03G064700 Carya illinoinensis HOM05D004905 ORTHO05D005456 3.5e-39 167.2 545 37.1
Sopen02g031010 Solanum pennellii HOM05D004905 ORTHO05D005456 1.7e-38 164.9 566 29.2
AUR62009040 Chenopodium quinoa HOM05D004905 ORTHO05D005456 3.0e-38 164.1 527 35.9
Cpa.g.sc170.31 Carica papaya HOM05D004905 ORTHO05D005456 3.9e-38 163.7 558 35.5
BraA07t30992Z Brassica rapa HOM05D004905 ORTHO05D005456 1.9e-37 161.4 458 35.2
A07p33640 Brassica napus HOM05D004905 ORTHO05D005456 5.6e-37 159.8 458 34.9
Phvul.004G002200 Phaseolus vulgaris HOM05D004905 ORTHO05D005456 5.6e-37 159.8 528 32.8
Phvul.008G008400 Phaseolus vulgaris HOM05D004905 ORTHO05D005456 5.6e-37 159.8 559 42.4
Gohir.A11G165900 Gossypium hirsutum HOM05D004905 ORTHO05D005456 7.3e-37 159.5 554 37.2
PGR004G1909 Punica granatum HOM05D004905 ORTHO05D005456 8.1e-36 156.0 550 44.4
BolC6t39105H Brassica oleracea HOM05D004905 ORTHO05D005456 1.1e-35 155.6 550 32.7
Gohir.A07G175500 Gossypium hirsutum HOM05D004905 ORTHO05D005456 1.1e-35 155.6 563 37.3
Aa31LG2G3310 Aethionema arabicum HOM05D004905 ORTHO05D005456 3.1e-35 154.1 467 29.1
CARHR058960 Cardamine hirsuta HOM05D004905 ORTHO05D005456 3.1e-35 154.1 468 32.5
C06p40220 Brassica napus HOM05D000005 ORTHO05D005456 4.0e-35 153.7 552 33.0
SalBow3G3699 Salvia bowleyana HOM05D004905 ORTHO05D005456 4.0e-35 153.7 540 32.8
AL2G25050 Arabidopsis lyrata HOM05D004905 ORTHO05D005456 5.2e-35 153.3 468 29.3
BcaC08g46129 Brassica carinata HOM05D004905 ORTHO05D005456 1.5e-34 151.8 547 32.5
Cc07_g08530 Coffea canephora HOM05D004905 ORTHO05D005456 1.5e-34 151.8 574 39.5
Gohir.D07G181800 Gossypium hirsutum HOM05D004905 ORTHO05D005456 3.4e-34 150.6 559 36.5
BcaB03g15228 Brassica carinata HOM05D004905 ORTHO05D005456 4.4e-34 150.2 454 33.0
Gorai.001G202800 Gossypium raimondii HOM05D004905 ORTHO05D005456 5.8e-34 149.8 559 37.0
Lj2C439T5 Lonicera japonica HOM05D004905 ORTHO05D005456 7.6e-34 149.4 518 30.1
AT1G66840 Arabidopsis thaliana HOM05D004905 ORTHO05D005456 3.8e-33 147.1 470 34.7
Carub.0002s1304 Capsella rubella HOM05D004905 ORTHO05D005456 3.8e-33 147.1 466 30.7
Oeu041980.1 Olea europaea HOM05D004905 ORTHO05D005456 4.9e-33 146.7 535 39.3
PGSC0003DMG400026397 Solanum tuberosum HOM05D004905 ORTHO05D005456 4.9e-33 146.7 566 28.8
CSS0018291 Camellia sinensis var. sinensis HOM05D004905 ORTHO05D005456 1.1e-32 145.6 288 40.3
PSO017G0866 Papaver somniferum HOM05D004905 ORTHO05D005456 1.1e-32 145.6 474 37.1
Glyma.19G001900 Glycine max HOM05D004905 ORTHO05D005456 4.1e-32 143.7 547 38.4
MD17G1250200 Malus domestica HOM05D004905 ORTHO05D005456 2.7e-31 141.0 378 50.0
PSO478G4495 Papaver somniferum HOM05D004905 ORTHO05D005456 4.6e-31 140.2 581 30.3
Sed0000790 Sechium edule HOM05D004905 ORTHO05D005456 7.8e-31 139.4 569 35.7
Sc10g0001050 Simmondsia chinensis HOM05D004905 ORTHO05D005456 1.0e-30 139.0 516 36.6
Dinv34793 Davidia involucrata HOM05D004905 ORTHO05D005456 4.3e-29 133.7 335 51.6
Sp7g03910 Schrenkiella parvula HOM05D004905 ORTHO05D005456 3.6e-28 130.6 457 31.3
BraA04t16780Z Brassica rapa HOM05D004905 ORTHO05D005456 1.4e-27 128.6 466 28.5
ATR0681G096 Amborella trichopoda HOM05D004905 ORTHO05D005456 1.8e-27 128.3 476 41.4
THA.LOC104823849 Tarenaya hassleriana HOM05D004905 ORTHO05D005456 1.8e-27 128.3 468 32.1
Sp5g21810 Schrenkiella parvula HOM05D004905 ORTHO05D005456 3.1e-27 127.5 466 31.8
AT5G38150 Arabidopsis thaliana HOM05D004905 ORTHO05D005456 5.2e-27 126.7 543 34.3
BcaB06g27171 Brassica carinata HOM05D004905 ORTHO05D005456 5.2e-27 126.7 462 27.5
Carub.0005s1253 Capsella rubella HOM05D004905 ORTHO05D005456 1.5e-26 125.2 484 26.9
Aa31LG9G17230 Aethionema arabicum HOM05D004905 ORTHO05D005456 2.0e-26 124.8 440 35.7
A04p11140 Brassica napus HOM05D004905 ORTHO05D005456 2.0e-26 124.8 486 27.6
C04p44880 Brassica napus HOM05D004905 ORTHO05D005456 3.8e-25 120.6 464 27.6
CAN.G625.56 Capsicum annuum HOM05D004905 ORTHO05D005456 1.1e-24 119.0 566 26.9
Hund13701 Selenicereus undatus HOM05D004905 ORTHO05D005456 3.2e-24 117.5 516 29.7
AUR62023266 Chenopodium quinoa HOM05D004905 ORTHO05D005456 2.7e-23 114.4 523 32.1
unitig_37.g12374 Utricularia gibba HOM05D004905 ORTHO05D005456 4.6e-23 113.6 440 33.4
AL7G52720 Arabidopsis lyrata HOM05D004905 ORTHO05D005456 1.0e-22 112.5 468 31.0
unitig_899.g14515 Utricularia gibba HOM05D004905 ORTHO05D005456 5.1e-22 110.2 508 25.4
GSVIVG01030977001 Vitis vinifera HOM05D004905 ORTHO05D005456 1.9e-21 108.2 207 39.1
CDE08G0600 Ceratophyllum demersum HOM05D004905 ORTHO05D005456 1.6e-20 105.1 440 27.5
Ah.10g037620 Amaranthus hybridus HOM05D004905 ORTHO05D005456 9.0e-19 99.4 434 32.3
CsaV3_2G033850 Cucumis sativus L. HOM05D004905 ORTHO05D005456 9.0e-19 99.4 573 34.0
Aqoxy4G00894 Aquilegia oxysepala HOM05D004905 ORTHO05D005456 5.8e-18 96.7 181 35.9
BolC4t26067H Brassica oleracea HOM05D004905 ORTHO05D005456 7.6e-18 96.3 464 26.5
Zm00001eb156080 Zea mays HOM05D004905 ORTHO05D005456 1.9e-16 91.7 566 24.2
MELO3C008158.2 Cucumis melo HOM05D004905 ORTHO05D005456 4.2e-16 90.5 565 33.8
AUR62023221 Chenopodium quinoa HOM05D004905 ORTHO05D005456 5.4e-16 90.1 174 39.1
ClCG11G007710 Citrullus lanatus HOM05D004905 ORTHO05D005456 5.4e-16 90.1 565 31.9
Thhalv10027702m.g Eutrema salsugineum HOM05D004905 ORTHO05D005456 5.1e-14 83.6 459 31.2
AUR62023222 Chenopodium quinoa HOM05D004905 ORTHO05D005456 6.7e-14 83.2 211 33.2
Os01g0692300 Oryza sativa ssp. japonica HOM05D004905 ORTHO05D005456 1.9e-13 81.6 451 31.7
Glyma.05G002000 Glycine max HOM05D004905 ORTHO05D005456 2.5e-13 81.3 521 38.2
Thhalv10018290m.g Eutrema salsugineum HOM05D004905 ORTHO05D005456 3.3e-13 80.9 468 34.4
QL06p049807 Quercus lobata HOM05D004905 ORTHO05D005456 9.6e-13 79.3 290 28.3
BcaC02g09630 Brassica carinata HOM05D004905 ORTHO05D005456 2.4e-11 74.7 398 24.6
Haze_04421 Corylus avellana HOM05D004905 ORTHO05D019407 5.3e-11 73.6 147 37.4
HPP92_008194 Vanilla planifolia HOM05D004905 ORTHO05D005456 6.9e-11 73.2 306 38.9
Aqoxy4G01116 Aquilegia oxysepala HOM05D004905 ORTHO05D005456 1.9e-08 65.1 125 37.6
AUR62039051 Chenopodium quinoa HOM05D004905 ORTHO05D005456 5.5e-08 63.5 74 54.1
AUR62016893 Chenopodium quinoa HOM05D022647 ORTHO05D005456 9.3e-08 62.8 74 52.7
AUR62044563 Chenopodium quinoa HOM05D022647 ORTHO05D005456 9.3e-08 62.8 74 52.7
Os05g0550100 Oryza sativa ssp. japonica HOM05D004905 ORTHO05D005456 7.9e-07 59.7 392 22.2
AUR62016892 Chenopodium quinoa HOM05D022647 ORTHO05D005456 1.0e-06 59.3 74 50.0
Sed0007556 Sechium edule HOM05D001827 ORTHO05D001790 6.7e-06 56.6 376 28.2

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (3 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (8 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (4 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (4 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings