Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 1.5e-184 649.4 331 100.0
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.3e-180 636.3 331 98.2
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.3e-180 636.3 331 98.2
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.7e-180 636.0 331 97.9
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 3.7e-180 634.8 331 97.9
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.2e-173 613.2 331 94.9
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 9.1e-171 603.6 331 93.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 2.3e-169 599.0 327 93.6
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 5.0e-169 597.8 331 92.1
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 8.6e-169 597.0 331 91.8
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.1e-168 596.7 337 92.0
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.5e-168 595.5 331 91.5
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 4.2e-168 594.7 327 92.7
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.3e-164 583.2 327 90.5
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 2.9e-164 582.0 328 90.2
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.9e-164 582.0 327 91.1
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 4.9e-164 581.3 329 90.6
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 8.3e-164 580.5 332 89.5
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.1e-163 580.1 328 89.9
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.8e-163 579.3 328 89.9
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.4e-163 578.9 332 89.5
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.2e-163 578.6 330 89.7
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 2.7e-162 575.5 332 89.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 7.8e-162 573.9 328 89.3
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.7e-161 572.8 329 88.4
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 2.9e-161 572.0 335 88.4
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 2.9e-161 572.0 335 88.4
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 5.0e-161 571.2 332 88.6
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 6.6e-161 570.9 325 90.2
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 6.6e-161 570.9 327 89.3
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.1e-160 570.1 328 88.4
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.2e-159 566.6 329 88.4
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.6e-159 566.2 329 88.8
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 3.6e-159 565.1 327 88.4
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.7e-159 564.7 332 87.3
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.0e-158 563.5 332 87.0
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.0e-158 563.5 326 88.0
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.4e-158 563.1 332 86.7
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.8e-158 562.8 325 89.5
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.2e-158 561.2 332 86.7
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.4e-157 558.5 327 86.9
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 7.5e-157 557.4 332 85.2
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.3e-156 556.6 327 86.9
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.9e-156 555.4 332 87.0
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 3.7e-156 555.1 332 84.9
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 4.9e-156 554.7 329 86.3
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 6.4e-156 554.3 331 85.2
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 8.3e-156 553.9 329 86.3
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 8.3e-156 553.9 328 86.9
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 1.4e-155 553.1 328 85.4
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 1.4e-155 553.1 332 84.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.4e-155 553.1 329 86.0
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 2.4e-155 552.4 329 85.7
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 2.4e-155 552.4 329 85.7
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 2.4e-155 552.4 329 85.7
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 2.4e-155 552.4 329 85.7
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.2e-155 552.0 327 85.9
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.2e-155 552.0 327 85.9
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 3.2e-155 552.0 332 84.3
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 4.1e-155 551.6 332 84.3
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 5.4e-155 551.2 332 84.3
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 5.4e-155 551.2 332 83.7
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 7.0e-155 550.8 329 85.7
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 7.0e-155 550.8 327 85.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 7.0e-155 550.8 327 85.0
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 9.2e-155 550.4 329 85.7
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.2e-155 550.4 332 84.9
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 9.2e-155 550.4 332 84.0
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.6e-154 549.7 373 79.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 3.5e-154 548.5 326 85.6
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 4.6e-154 548.1 332 83.1
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 4.6e-154 548.1 386 76.9
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 6.0e-154 547.7 329 85.1
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.3e-153 546.6 332 83.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-153 546.6 333 83.8
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.7e-153 546.2 325 85.5
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 3.9e-153 545.0 331 84.3
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.9e-153 545.0 331 84.9
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 5.0e-153 544.7 328 83.8
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 6.6e-153 544.3 331 83.4
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.1e-152 543.5 359 78.3
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.5e-152 543.1 329 85.1
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 3.3e-152 542.0 327 86.9
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 5.6e-152 541.2 333 83.2
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.2e-151 540.0 327 83.8
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.6e-151 539.7 327 84.1
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.1e-151 539.3 328 83.2
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 4.7e-151 538.1 329 83.3
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.3e-150 535.8 331 83.1
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.3e-150 535.8 331 83.1
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 2.0e-149 532.7 329 83.0
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.6e-149 532.3 331 81.3
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 7.5e-149 530.8 331 81.0
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 9.8e-149 530.4 455 65.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 3.7e-148 528.5 314 85.7
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 3.5e-146 521.9 336 83.0
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 7.8e-146 520.8 330 82.7
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.8e-146 520.8 304 87.5
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.1e-143 512.7 327 80.1
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 3.6e-143 511.9 328 80.2
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 3.1e-142 508.8 331 80.7
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 5.8e-141 504.6 291 86.3
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 6.4e-140 501.1 332 81.0
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 7.8e-138 494.2 329 75.1
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.5e-136 490.0 330 75.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.4e-134 482.6 377 70.3
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.2e-133 480.3 302 83.1
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 6.4e-132 474.6 325 73.2
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.3e-129 466.8 330 75.5
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 2.8e-127 459.1 279 83.5
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 9.0e-126 454.1 329 73.9
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.8e-124 448.7 335 73.1
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.9e-115 419.9 234 91.0
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.3e-113 413.7 323 68.7
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.5e-112 409.5 324 61.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 7.4e-112 407.9 317 64.4
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.6e-111 406.8 330 63.9
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.3e-104 382.5 233 81.1
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.1e-102 377.5 274 72.6
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 5.3e-102 375.2 321 64.2
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.9e-92 342.8 336 61.6
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.8e-92 342.4 197 88.8
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.1e-90 336.7 335 60.0
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.4e-89 334.0 239 69.5
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 3.3e-88 329.3 220 80.0
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-87 327.4 229 75.1
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-86 323.9 220 78.6
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 7.9e-82 308.1 220 76.8
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.3e-79 300.8 167 88.6
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 8.5e-76 288.1 339 45.1
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.3e-71 274.2 165 87.3
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 7.7e-69 265.0 329 51.7
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.2e-67 259.6 165 80.0
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 8.0e-66 255.0 268 55.2
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-60 237.3 135 88.9
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 6.3e-55 218.8 130 87.7
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.1e-43 181.4 162 64.2
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.5e-43 178.3 103 86.4
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 2.3e-41 173.7 149 61.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 7.8e-37 158.7 103 79.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.0e-36 158.3 181 52.5
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.3e-36 157.9 90 91.1
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.7e-36 157.5 89 85.4
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-34 151.4 92 87.0
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.9e-30 137.5 88 76.1
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 3.2e-30 136.7 69 91.3
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 4.6e-29 132.9 80 82.5
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.0e-28 130.2 77 89.6
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.9e-27 127.5 74 85.1
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 3.3e-27 126.7 72 83.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-24 118.2 72 84.7
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.0e-24 117.5 75 74.7
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.4e-22 111.3 69 79.7
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.5e-19 101.3 67 82.1
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-16 91.7 65 78.5
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 9.6e-11 72.0 85 52.9
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 3.4e-08 63.5 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 3.4e-08 63.5 48 68.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings