Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 4.9e-216 754.2 386 100.0
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 1.1e-159 567.0 386 78.2
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.4e-159 566.6 389 77.6
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.4e-159 566.6 389 77.6
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.5e-159 565.8 389 77.4
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 9.4e-159 563.9 384 77.9
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.6e-158 563.1 386 77.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.7e-158 562.4 382 78.5
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.6e-158 562.0 382 78.5
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 4.6e-158 561.6 381 78.7
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 4.6e-158 561.6 386 78.0
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 6.1e-158 561.2 381 78.0
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 7.9e-158 560.8 379 78.9
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 3.0e-157 558.9 381 78.7
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 3.9e-157 558.5 380 78.2
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 6.7e-157 557.8 382 78.3
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 8.8e-157 557.4 381 78.0
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.5e-156 556.6 386 77.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.5e-156 556.6 456 68.6
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 2.0e-156 556.2 382 77.2
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 7.4e-156 554.3 386 77.2
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 9.7e-156 553.9 389 76.6
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.3e-155 551.2 382 77.2
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.3e-155 551.2 382 77.0
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 8.2e-155 550.8 379 77.8
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 8.2e-155 550.8 379 77.8
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.4e-154 549.3 386 76.2
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 4.1e-154 548.5 386 76.4
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 4.1e-154 548.5 381 76.9
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 5.3e-154 548.1 386 75.9
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 6.9e-154 547.7 386 76.2
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.2e-153 547.0 386 76.7
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 1.5e-153 546.6 386 76.9
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.0e-153 546.2 386 76.7
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.6e-153 545.8 386 75.6
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.6e-153 545.8 381 76.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 7.7e-153 544.3 382 76.4
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 7.7e-153 544.3 386 75.6
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.0e-152 543.9 386 75.9
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.0e-152 543.9 386 76.2
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.0e-152 543.9 386 74.9
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.3e-152 543.5 386 75.1
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.7e-152 543.1 386 74.4
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.2e-152 542.7 386 74.6
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.9e-152 542.3 382 74.9
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 5.0e-152 541.6 386 76.2
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 5.0e-152 541.6 386 76.2
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 5.0e-152 541.6 386 73.8
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 6.5e-152 541.2 386 74.1
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.1e-151 540.4 386 74.9
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.4e-151 540.0 386 74.4
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.5e-151 539.3 381 75.6
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.5e-151 539.3 381 75.6
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 3.2e-151 538.9 386 74.4
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 3.2e-151 538.9 382 75.7
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.5e-151 538.1 381 75.3
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 5.5e-151 538.1 382 75.9
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-150 537.0 392 75.0
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.2e-150 537.0 381 74.8
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.6e-150 536.6 413 70.9
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 2.7e-150 535.8 381 74.5
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.7e-150 535.8 386 73.8
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.6e-150 535.4 386 74.6
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 4.7e-150 535.0 385 73.2
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 7.9e-150 534.3 380 75.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 7.9e-150 534.3 381 74.3
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 7.9e-150 534.3 386 73.6
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 7.9e-150 534.3 386 73.6
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 1.0e-149 533.9 381 74.3
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.0e-149 533.9 382 73.8
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.4e-149 533.5 381 75.1
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.8e-149 533.1 379 75.2
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.8e-149 533.1 379 75.7
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.8e-149 533.1 386 75.4
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 2.3e-149 532.7 381 74.0
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 2.3e-149 532.7 381 74.0
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 2.3e-149 532.7 381 74.0
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 2.3e-149 532.7 381 74.0
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 8.8e-149 530.8 381 73.8
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 8.8e-149 530.8 381 74.0
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.1e-148 530.4 381 75.1
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.5e-148 530.0 382 73.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.3e-148 528.9 381 73.8
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 4.4e-148 528.5 417 70.5
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 7.4e-148 527.7 383 73.4
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 9.7e-148 527.3 385 72.5
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 3.7e-147 525.4 381 74.8
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.6e-145 519.2 384 72.1
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.9e-145 518.1 385 71.4
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 5.9e-145 518.1 379 72.8
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 7.7e-145 517.7 384 71.9
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-144 517.3 381 72.4
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-144 516.9 385 71.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.5e-143 512.7 368 73.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 4.0e-141 505.4 358 75.4
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 2.6e-140 502.7 382 71.7
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.7e-137 491.1 382 70.4
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 1.7e-136 490.0 386 71.0
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.2e-136 489.6 382 69.1
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 3.8e-136 488.8 345 75.1
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 3.8e-136 488.8 384 69.8
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.9e-135 486.5 382 69.9
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 3.1e-130 469.2 386 68.9
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 3.5e-129 465.7 387 65.4
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.9e-129 464.9 356 72.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-128 463.8 431 61.3
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.8e-128 462.2 380 68.2
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 6.5e-128 461.5 381 65.4
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.2e-124 450.7 385 66.0
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.8e-123 446.0 380 63.7
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.4e-122 443.0 386 65.5
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 1.5e-119 433.7 333 70.0
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.5e-113 412.5 235 90.2
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 3.3e-111 406.0 377 61.0
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.7e-105 386.3 378 54.2
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.5e-105 386.0 234 84.6
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 5.6e-103 378.6 378 56.1
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 5.6e-103 378.6 372 54.6
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 3.9e-96 355.9 373 55.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 5.6e-95 352.1 326 60.7
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 9.9e-92 341.3 198 89.4
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.2e-89 334.3 392 54.6
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.4e-85 320.1 221 78.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 6.9e-85 318.5 387 52.2
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.3e-83 314.3 221 76.9
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 6.4e-83 312.0 293 57.7
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.4e-82 310.8 277 62.5
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 8.7e-80 301.6 221 76.0
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 2.5e-79 300.1 168 89.9
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.6e-70 270.8 263 51.3
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.3e-67 261.2 218 65.6
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 4.9e-67 259.2 269 56.5
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 2.1e-65 253.8 381 45.4
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.3e-64 251.1 228 60.5
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.3e-56 224.6 185 65.9
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.9e-51 206.8 183 63.4
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 6.7e-40 169.1 213 47.9
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.2e-38 162.2 156 56.4
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 4.5e-36 156.4 90 85.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 7.7e-36 155.6 187 51.9
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 1.0e-35 155.2 103 77.7
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.7e-35 154.5 203 45.3
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 8.8e-32 142.1 145 57.2
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 1.3e-30 138.3 78 85.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-30 138.3 89 78.7
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 2.0e-28 131.0 75 88.0
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 5.9e-28 129.4 73 84.9
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.0e-27 128.6 81 81.5
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 3.0e-24 117.1 144 51.4
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.0e-24 117.1 75 76.0
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.0e-24 117.1 130 53.1
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 5.2e-24 116.3 67 86.6
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.3e-22 111.7 70 80.0
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 8.2e-22 109.0 71 78.9
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 4.5e-20 103.2 62 83.9
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 2.3e-08 64.3 35 85.7
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.0e-08 63.9 86 50.0
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 4.0e-08 63.5 48 68.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings