Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 4.3e-181 637.9 328 100.0
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.9e-178 627.5 328 98.5
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-177 626.3 328 98.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.9e-162 574.3 374 83.7
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 3.8e-161 571.6 331 89.1
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 6.5e-161 570.9 328 89.6
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 2.5e-160 568.9 327 90.2
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.4e-160 567.0 331 88.5
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.1e-159 565.8 331 88.2
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.0e-158 563.5 331 87.9
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 6.7e-158 560.8 331 86.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.7e-156 556.2 330 86.7
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 3.7e-156 555.1 329 86.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.7e-156 555.1 330 86.1
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 4.8e-156 554.7 331 85.5
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 6.3e-156 554.3 327 85.6
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 6.3e-156 554.3 334 84.7
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 5.3e-155 551.2 327 85.9
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 5.3e-155 551.2 325 86.5
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 9.1e-155 550.4 327 85.0
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 9.1e-155 550.4 331 85.2
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 1.6e-154 549.7 329 84.5
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 7.7e-154 547.4 331 85.5
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.3e-153 546.6 329 83.9
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.7e-153 546.2 329 84.8
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.9e-153 545.4 327 84.4
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 5.0e-153 544.7 330 83.6
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.1e-152 543.5 330 82.4
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.5e-152 543.1 331 83.7
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 1.9e-152 542.7 331 84.3
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 1.9e-152 542.7 331 84.3
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.2e-152 542.0 331 82.5
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.2e-152 542.0 329 84.5
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 4.2e-152 541.6 331 84.0
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 5.5e-152 541.2 333 84.4
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 5.5e-152 541.2 333 84.4
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 5.5e-152 541.2 327 83.8
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.5e-152 541.2 329 84.2
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 7.2e-152 540.8 331 84.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.2e-152 540.8 327 84.4
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.6e-151 539.7 331 83.1
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.1e-151 539.3 331 81.6
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 2.1e-151 539.3 328 85.1
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.7e-151 538.9 327 84.4
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 3.6e-151 538.5 337 83.4
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 3.6e-151 538.5 328 85.1
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.6e-151 538.5 331 81.3
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.4e-150 536.6 331 81.6
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.4e-150 536.6 331 81.6
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.8e-150 536.2 331 83.4
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.8e-150 536.2 331 83.4
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.3e-150 535.8 328 81.7
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 3.0e-150 535.4 331 82.2
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 6.8e-150 534.3 331 80.4
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 8.8e-150 533.9 331 81.6
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.0e-149 532.7 332 80.4
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.0e-149 532.7 331 80.4
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 3.4e-149 531.9 331 80.4
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 4.4e-149 531.6 331 80.4
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.7e-149 531.2 327 82.3
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.7e-149 531.2 327 82.3
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 7.5e-149 530.8 331 80.1
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 7.5e-149 530.8 358 76.5
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 9.8e-149 530.4 327 82.6
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.3e-148 530.0 327 82.0
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 3.7e-148 528.5 326 81.9
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 4.8e-148 528.1 327 80.7
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 6.3e-148 527.7 332 79.5
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.4e-147 526.6 328 80.8
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.4e-147 526.6 385 72.5
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 2.4e-147 525.8 327 81.7
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.1e-147 525.4 327 81.7
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.1e-147 525.4 327 81.7
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.1e-147 525.4 327 81.7
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.1e-147 525.4 327 81.7
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 3.1e-147 525.4 327 81.7
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 3.1e-147 525.4 327 80.4
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 3.1e-147 525.4 325 82.5
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.1e-147 525.4 331 81.6
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 5.4e-147 524.6 327 81.3
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 9.1e-147 523.9 327 81.0
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.2e-146 523.5 327 81.3
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.2e-146 523.5 327 81.0
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 2.0e-146 522.7 328 79.6
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 7.7e-146 520.8 327 80.4
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.0e-145 520.4 325 80.3
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.7e-145 519.6 327 80.7
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 2.9e-145 518.8 327 82.6
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 2.9e-145 518.8 371 75.5
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 4.2e-144 515.0 331 79.5
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 7.2e-144 514.2 455 63.5
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.2e-143 513.5 331 79.2
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 2.6e-141 505.8 331 82.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 9.8e-141 503.8 314 80.9
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 2.8e-140 502.3 327 78.3
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 6.3e-140 501.1 331 76.7
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.8e-139 499.6 303 84.5
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.4e-139 499.2 331 79.5
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 2.7e-138 495.7 328 79.0
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 4.5e-138 495.0 327 77.7
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.1e-136 490.3 327 78.0
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.1e-136 490.3 331 77.6
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 5.2e-134 481.5 300 80.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 8.9e-134 480.7 330 74.5
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-132 476.5 292 82.2
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.6e-130 469.9 330 73.3
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 4.6e-130 468.4 331 75.2
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.4e-126 456.8 326 72.1
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.1e-126 455.7 324 73.5
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.6e-125 452.6 326 73.0
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 6.0e-122 441.4 279 81.0
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 4.7e-119 431.8 335 69.6
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 2.9e-108 396.0 323 66.6
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 7.8e-106 387.9 324 59.0
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 6.6e-105 384.8 330 61.2
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 6.6e-105 384.8 234 83.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.5e-104 382.9 318 61.3
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.2e-100 369.8 233 79.8
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 2.7e-98 362.8 314 63.1
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.0e-97 360.9 272 71.0
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.7e-90 336.3 338 60.4
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.3e-89 334.0 197 88.3
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 3.9e-89 332.4 240 68.8
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.1e-86 324.3 227 72.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.9e-84 316.2 333 57.1
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-80 303.9 220 75.9
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 8.1e-79 298.1 220 74.1
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 4.2e-75 285.8 220 73.2
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.3e-73 280.8 167 83.8
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.8e-73 280.4 333 45.6
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.2e-69 267.7 164 83.5
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.2e-68 263.5 164 79.3
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-62 244.6 135 88.9
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.8e-62 243.8 327 48.9
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.9e-59 233.8 267 52.8
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-56 224.6 130 86.9
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.5e-52 208.4 105 100.0
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.4e-41 174.5 160 61.2
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.2e-40 171.4 150 61.3
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 4.4e-40 169.5 89 92.1
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.1e-38 164.9 91 91.2
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 7.7e-37 158.7 103 78.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.5e-35 154.5 186 51.1
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.2e-31 140.6 90 81.1
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 4.1e-30 136.3 69 92.8
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.4e-30 136.0 77 88.3
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 5.9e-29 132.5 72 87.5
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 3.6e-26 123.2 88 69.3
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.3e-25 120.6 75 78.7
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 5.2e-25 119.4 69 85.5
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 6.8e-25 119.0 82 73.2
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 3.4e-24 116.7 74 78.4
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 9.8e-24 115.2 72 81.9
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.7e-23 114.4 66 87.9
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 9.5e-19 98.6 65 76.9
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.4e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 2.4e-06 57.4 85 48.2

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings