Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.3e-181 637.9 328 100.0
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 4.5e-178 627.9 328 98.5
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.4e-174 616.3 328 96.6
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.4e-165 584.7 374 85.0
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 8.0e-159 563.9 331 87.9
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 1.4e-158 563.1 328 88.4
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 5.2e-158 561.2 327 89.0
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.0e-157 559.3 331 87.3
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 4.4e-157 558.1 331 87.0
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.2e-156 555.8 331 86.7
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 1.4e-155 553.1 331 85.8
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 5.9e-154 547.7 331 84.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 7.7e-154 547.4 330 85.2
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.7e-153 546.2 330 85.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 2.2e-153 545.8 327 85.3
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 2.9e-153 545.4 334 83.5
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 3.8e-153 545.0 329 85.4
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 5.0e-153 544.7 331 84.0
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 6.5e-153 544.3 327 84.1
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 3.2e-152 542.0 329 83.6
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 4.2e-152 541.6 327 83.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 4.2e-152 541.6 325 84.9
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 1.6e-151 539.7 327 83.5
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 2.1e-151 539.3 329 83.6
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 2.7e-151 538.9 329 83.0
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 8.0e-151 537.3 331 84.0
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.3e-150 535.8 327 83.2
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.0e-150 535.4 333 83.8
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.0e-150 535.4 333 83.8
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.0e-150 535.4 328 84.5
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.0e-150 535.0 329 83.3
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 5.2e-150 534.6 330 82.1
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 6.8e-150 534.3 331 81.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 6.8e-150 534.3 331 84.0
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 8.8e-150 533.9 331 83.1
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 8.8e-150 533.9 331 83.1
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.2e-149 533.5 330 80.9
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.5e-149 533.1 331 82.2
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.0e-149 532.7 331 82.8
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 4.4e-149 531.6 331 80.7
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.7e-149 531.2 329 82.7
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.5e-149 530.8 327 82.9
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.7e-148 529.6 331 81.6
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 2.8e-148 528.9 331 80.7
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.8e-148 528.9 327 82.9
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 3.7e-148 528.5 337 81.9
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 3.7e-148 528.5 328 80.8
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.7e-148 528.5 331 80.4
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 3.7e-148 528.5 328 83.5
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.7e-148 528.5 331 79.8
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 8.3e-148 527.3 331 82.2
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 8.3e-148 527.3 331 82.2
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.4e-147 525.8 331 79.8
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 3.1e-147 525.4 331 80.7
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 4.1e-147 525.0 332 79.5
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 4.1e-147 525.0 331 79.8
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 7.0e-147 524.2 331 78.9
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 9.1e-147 523.9 331 79.5
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 9.1e-147 523.9 331 80.1
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 9.1e-147 523.9 331 79.5
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.2e-146 523.5 327 81.3
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.2e-146 523.5 327 81.3
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 2.0e-146 522.7 327 81.7
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.7e-146 522.3 327 81.0
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 7.7e-146 520.8 326 81.0
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 7.7e-146 520.8 332 78.9
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 7.7e-146 520.8 358 75.1
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.0e-145 520.4 327 79.8
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 2.9e-145 518.8 328 79.9
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 6.5e-145 517.7 327 79.5
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.5e-144 516.5 385 71.2
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.9e-144 516.2 327 80.4
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.4
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.4
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.4
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.4
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.4
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.5e-144 515.8 325 80.9
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.2e-144 515.4 328 78.7
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.2e-144 515.4 331 80.1
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 4.2e-144 515.0 327 80.1
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 7.2e-144 514.2 327 79.8
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 9.4e-144 513.8 327 80.1
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 9.4e-144 513.8 327 79.8
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.2e-143 513.5 455 63.5
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.6e-143 513.1 371 74.9
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.6e-143 513.1 325 79.4
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.7e-143 512.3 331 78.9
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 3.6e-143 511.9 327 79.8
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 6.1e-143 511.1 327 79.2
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 6.1e-143 511.1 331 78.9
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 2.3e-142 509.2 327 81.0
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 2.7e-138 495.7 331 80.7
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 5.9e-138 494.6 327 77.4
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 7.7e-138 494.2 314 79.6
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.0e-137 493.8 331 78.9
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 5.0e-137 491.5 331 75.5
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.9e-136 489.6 303 82.8
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 2.1e-135 486.1 328 77.7
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.1e-135 486.1 327 76.5
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.3e-134 482.6 327 77.1
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 8.9e-134 480.7 331 76.1
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.7e-132 476.5 300 80.3
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 3.7e-132 475.3 330 73.9
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-129 466.5 292 80.5
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 9.5e-128 460.7 330 72.1
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 4.7e-127 458.4 331 73.7
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 6.2e-127 458.0 326 72.1
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 7.5e-125 451.1 326 72.7
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 9.8e-125 450.7 324 72.5
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 4.7e-119 431.8 279 79.2
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 9.8e-117 424.1 335 68.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 5.4e-107 391.7 323 66.3
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.5e-104 382.9 324 58.3
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 5.6e-104 381.7 330 61.2
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.4e-102 377.1 234 82.1
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.8e-102 376.7 318 60.7
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 7.8e-98 361.3 233 78.1
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 8.7e-97 357.8 314 62.1
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 2.8e-95 352.8 263 70.7
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.3e-89 334.0 338 60.4
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 4.3e-88 328.9 197 87.3
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.3e-87 327.4 240 67.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 8.1e-87 324.7 227 72.2
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 6.0e-82 308.5 333 56.2
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 1.9e-80 303.5 220 76.4
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.1e-78 297.7 220 74.5
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 4.2e-75 285.8 220 73.6
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.3e-73 280.8 333 45.9
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 8.7e-73 278.1 167 83.8
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 9.0e-70 268.1 164 82.9
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 5.5e-67 258.8 164 77.4
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 3.4e-61 239.6 135 86.7
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 3.8e-60 236.1 327 48.0
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 6.1e-58 228.8 267 52.1
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 3.7e-55 219.5 130 84.6
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.2e-51 206.5 105 99.0
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.8e-41 174.1 150 62.0
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.5e-40 171.0 160 60.0
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 2.2e-39 167.2 89 91.0
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 4.1e-38 162.9 91 90.1
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 7.7e-37 158.7 103 78.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.6e-34 151.0 186 50.5
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 8.3e-31 138.7 90 80.0
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.6e-29 134.4 77 87.0
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 5.9e-29 132.5 69 89.9
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 3.8e-28 129.8 72 86.1
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 3.2e-27 126.7 88 71.6
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.6e-24 117.1 75 76.0
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 7.5e-24 115.5 69 82.6
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 9.8e-24 115.2 72 81.9
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.7e-23 114.4 82 69.5
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 4.9e-23 112.8 66 86.4
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 8.3e-23 112.1 74 75.7
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 3.6e-18 96.7 65 75.4
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.4e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings