Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 6.2e-255 883.6 447 100.0
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 3.6e-77 293.1 429 44.5
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 1.6e-64 251.1 435 37.9
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 1.6e-64 251.1 342 43.6
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 4.5e-64 249.6 418 41.9
Eucgr.F03267 Eucalyptus grandis HOM05D006067 ORTHO05D007327 7.7e-64 248.8 161 74.5
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 2.9e-63 246.9 450 39.6
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 7.2e-62 242.3 400 39.0
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 1.0e-60 238.4 431 36.7
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 1.2e-59 235.0 415 33.5
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 1.2e-59 235.0 415 33.5
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 2.6e-59 233.8 432 39.4
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 3.4e-59 233.4 359 40.7
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 6.3e-58 229.2 437 32.0
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 6.3e-58 229.2 435 38.4
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 1.6e-56 224.6 411 35.5
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 4.5e-56 223.0 345 40.3
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 5.0e-55 219.5 504 30.2
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 1.9e-54 217.6 413 38.3
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 5.5e-54 216.1 389 38.8
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 1.8e-52 211.1 421 31.4
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 2.3e-52 210.7 481 32.6
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 2.0e-51 207.6 391 34.0
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 2.2e-50 204.1 485 33.2
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 4.1e-49 199.9 471 31.8
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 5.9e-48 196.1 342 36.5
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 1.3e-47 194.9 497 31.2
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 6.1e-45 186.0 395 33.7
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 8.9e-44 182.2 416 32.2
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 1.2e-43 181.8 426 36.2
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 4.1e-41 173.3 389 32.9
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 1.2e-40 171.8 401 31.4
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 3.9e-39 166.8 352 33.5
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 6.6e-39 166.0 449 29.6
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 8.6e-39 165.6 409 30.1
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 9.5e-38 162.2 228 41.7
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 2.8e-37 160.6 519 28.5
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 4.7e-37 159.8 196 46.4
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 8.9e-36 155.6 196 45.9
AT1G78810 Arabidopsis thaliana HOM05D006067 ORTHO05D007327 5.8e-35 152.9 443 30.5
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 1.3e-34 151.8 219 43.8
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 1.4e-33 148.3 363 31.7
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 1.4e-33 148.3 219 42.5
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 2.4e-33 147.5 226 43.8
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 1.6e-32 144.8 400 28.2
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 4.6e-32 143.3 315 32.1
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 6.0e-32 142.9 356 30.3
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 1.3e-31 141.7 198 41.4
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 2.3e-31 141.0 366 30.9
BcaB05g25155 Brassica carinata HOM05D006067 ORTHO05D007327 9.5e-30 135.6 367 29.4
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 9.5e-30 135.6 188 44.7
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 1.2e-29 135.2 193 41.5
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 1.6e-29 134.8 312 31.7
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 3.6e-29 133.7 426 28.9
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 4.7e-29 133.3 310 31.6
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 8.1e-29 132.5 404 28.0
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 5.2e-28 129.8 187 46.5
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 1.2e-27 128.6 242 40.5
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 2.0e-27 127.9 207 38.2
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 7.6e-27 125.9 209 38.3
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 1.3e-26 125.2 242 40.1
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 3.7e-26 123.6 225 41.3
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 3.7e-26 123.6 196 37.8
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 4.9e-26 123.2 218 39.9
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 6.4e-26 122.9 221 39.4
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 1.4e-25 121.7 190 40.5
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 2.4e-25 120.9 207 41.1
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 9.2e-25 119.0 184 38.6
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 1.6e-24 118.2 218 35.8
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 2.7e-24 117.5 190 40.5
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 2.7e-24 117.5 194 37.1
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 3.5e-24 117.1 223 35.4
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 6.0e-24 116.3 137 48.2
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 7.8e-24 115.9 202 40.6
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 1.0e-23 115.5 223 40.4
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 1.0e-23 115.5 227 39.2
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 1.3e-23 115.2 189 37.6
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 2.3e-23 114.4 220 34.5
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 3.0e-23 114.0 193 35.2
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 3.9e-23 113.6 220 34.5
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 5.1e-23 113.2 229 36.2
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 1.9e-22 111.3 90 55.6
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 2.5e-22 110.9 138 45.7
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 7.3e-22 109.4 121 47.9
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 1.6e-21 108.2 93 50.5
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 2.1e-21 107.8 215 33.0
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 3.6e-21 107.1 190 38.9
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 6.2e-21 106.3 195 39.5
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 5.2e-20 103.2 124 42.7
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 1.5e-19 101.7 200 38.0
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 2.6e-19 100.9 111 45.0
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 7.6e-19 99.4 126 42.1
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 9.9e-19 99.0 120 44.2
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 1.7e-18 98.2 204 37.7
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 2.2e-18 97.8 224 36.6
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 2.2e-18 97.8 126 42.9
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 2.9e-18 97.4 111 41.4
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 2.9e-18 97.4 126 42.9
SEGI_27593 Sequoiadendron giganteum HOM05D006067 ORTHO05D007327 4.9e-18 96.7 105 47.6
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 1.9e-17 94.7 221 30.3
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 2.4e-17 94.4 183 33.9
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 2.4e-17 94.4 202 34.2
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 3.2e-17 94.0 94 45.7
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 3.2e-17 94.0 94 45.7
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 7.1e-17 92.8 83 49.4
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 7.1e-17 92.8 84 51.2
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 2.1e-16 91.3 184 33.7
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla HOM05D006067 ORTHO05D007327 2.7e-16 90.9 65 58.5
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 4.6e-16 90.1 250 37.6
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 7.8e-16 89.4 117 42.7
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 6.6e-15 86.3 78 46.2
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 8.7e-15 85.9 186 31.7
Nitab4.5_0003565g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 5.6e-14 83.2 68 55.9
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 7.3e-14 82.8 95 41.1
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 9.6e-14 82.4 68 58.8
Mapoly0061s0049 Marchantia polymorpha HOM05D006067 ORTHO05D007327 4.8e-13 80.1 92 41.3
PGSC0003DMG400021262 Solanum tuberosum HOM05D006067 ORTHO05D007327 8.1e-13 79.3 71 56.3
Os01g0759000 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 3.1e-12 77.4 83 41.0
Zm00001eb152520 Zea mays HOM05D006067 ORTHO05D007327 6.9e-12 76.3 86 44.2
Mapoly1798s0001 Marchantia polymorpha HOM05D006067 ORTHO05D007327 2.4e-09 67.8 77 41.6
Nitab4.5_0000383g0160 Nicotiana tabacum HOM05D006067 ORTHO05D007327 3.2e-09 67.4 68 48.5
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 5.4e-09 66.6 65 46.2
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 7.9e-08 62.8 53 49.1
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.7e-07 61.6 61 45.9
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 5.6e-06 56.6 109 33.0

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (3 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (4 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (3 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings