Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03052 Eucalyptus grandis HOM05D001353 ORTHO05D005187 3.4e-278 961.1 501 100.0
QL05p021219 Quercus lobata HOM05D001353 ORTHO05D005187 3.2e-159 565.8 504 64.7
CiPaw.01G234100 Carya illinoinensis HOM05D001353 ORTHO05D005187 1.1e-156 557.4 506 62.6
PGR102G2383 Punica granatum HOM05D001353 ORTHO05D005187 1.2e-153 547.4 509 65.4
Ciclev10025383m.g Citrus clementina HOM05D001353 ORTHO05D005187 2.6e-153 546.2 518 59.1
CSS0044224 Camellia sinensis var. sinensis HOM05D001353 ORTHO05D005187 3.8e-152 542.3 530 59.2
Prupe.3G063900 Prunus persica HOM05D001353 ORTHO05D005187 6.5e-152 541.6 504 60.9
Sed0007714 Sechium edule HOM05D001353 ORTHO05D005187 2.5e-151 539.7 510 58.6
TPR.G37234 Trifolium pratense HOM05D001353 ORTHO05D005187 7.9e-150 534.6 507 59.8
Thecc.06G095300 Theobroma cacao HOM05D001353 ORTHO05D005187 1.0e-149 534.3 509 58.7
Lalb_Chr24g0396041 Lupinus albus HOM05D001353 ORTHO05D005187 6.7e-149 531.6 513 59.1
MD17G1188900 Malus domestica HOM05D001353 ORTHO05D005187 4.3e-148 528.9 496 60.3
CsaV3_7G033510 Cucumis sativus L. HOM05D001353 ORTHO05D005187 9.7e-148 527.7 510 59.4
GSVIVG01017044001 Vitis vinifera HOM05D001353 ORTHO05D005187 2.8e-147 526.2 525 58.9
Glyma.15G018200 Glycine max HOM05D001353 ORTHO05D005187 1.1e-146 524.2 523 58.3
Nn2g11646 Nelumbo nucifera HOM05D001353 ORTHO05D005187 1.2e-145 520.8 525 57.0
Lj3g0013233 Lotus japonicus HOM05D001353 ORTHO05D005187 5.0e-144 515.4 518 57.5
Phvul.005G170400 Phaseolus vulgaris HOM05D001353 ORTHO05D005187 1.1e-143 514.2 515 59.0
Ca_01153_v3 Cicer arietinum L. HOM05D001353 ORTHO05D005187 3.2e-143 512.7 508 57.5
VMungo1080G1628 Vigna mungo HOM05D001353 ORTHO05D005187 2.1e-142 510.0 518 58.1
Cfa002108 Carpinus fangiana HOM05D001353 ORTHO05D005187 3.6e-142 509.2 480 62.9
Haze_16338 Corylus avellana HOM05D001353 ORTHO05D005187 2.5e-140 503.1 478 62.1
Medtr2g101350 Medicago truncatula HOM05D001353 ORTHO05D005187 7.4e-140 501.5 516 57.6
Actinidia32713 Actinidia chinensis HOM05D001353 ORTHO05D005187 9.7e-140 501.1 527 57.3
Potri.001G186600 Populus trichocarpa HOM05D001353 ORTHO05D005187 4.8e-139 498.8 513 59.1
MELO3C024262.2 Cucumis melo HOM05D001353 ORTHO05D005187 1.4e-138 497.3 367 70.8
Dinv30464 Davidia involucrata HOM05D001353 ORTHO05D005187 1.5e-137 493.8 495 58.0
CANSAT56G0514 Cannabis sativa HOM05D001353 ORTHO05D005187 2.6e-137 493.0 514 56.4
Sabra01G0153700 Salix brachista HOM05D001353 ORTHO05D005187 5.9e-137 491.9 500 58.6
Gorai.003G064100 Gossypium raimondii HOM05D001353 ORTHO05D005187 1.7e-136 490.3 513 55.9
Aqoxy7G01510 Aquilegia oxysepala HOM05D001353 ORTHO05D005187 2.2e-136 490.0 522 55.4
arahy.Tifrunner.gnm1.ann1.8T8ZNV Arachis hypogaea HOM05D001353 ORTHO05D005187 3.8e-136 489.2 547 53.4
FvH4_6g31960 Fragaria vesca HOM05D001353 ORTHO05D005187 4.7e-134 482.3 510 55.5
arahy.Tifrunner.gnm1.ann1.K0TTLC Arachis hypogaea HOM05D001353 ORTHO05D005187 2.3e-133 479.9 535 53.3
Solyc03g120480.3 Solanum lycopersicum HOM05D001353 ORTHO05D005187 3.0e-133 479.6 505 54.9
Sopen03g039360 Solanum pennellii HOM05D001353 ORTHO05D005187 4.4e-132 475.7 506 54.3
Duzib160G0428 Durio zibethinus HOM05D001353 ORTHO05D005187 1.7e-131 473.8 453 58.5
MSTRG.11044 Avicennia marina HOM05D001353 ORTHO05D005187 8.2e-131 471.5 542 51.7
TAR383G0250 Trochodendron aralioides HOM05D001353 ORTHO05D005187 8.2e-131 471.5 511 54.6
Thhalv10020736m.g Eutrema salsugineum HOM05D001353 ORTHO05D005187 1.8e-130 470.3 496 55.6
Gohir.D03G060300 Gossypium hirsutum HOM05D001353 ORTHO05D005187 2.4e-130 469.9 454 57.7
Rhsim12G0201500 Rhododendron simsii HOM05D001353 ORTHO05D000070 4.1e-130 469.2 543 51.2
FAN02G4091 Fragaria x ananassa HOM05D001353 ORTHO05D005187 5.3e-130 468.8 491 55.4
ClCG09G001840 Citrullus lanatus HOM05D001353 ORTHO05D005187 7.0e-130 468.4 494 55.5
Carub.0003s1598 Capsella rubella HOM05D001353 ORTHO05D005187 1.5e-129 467.2 445 60.4
Nitab4.5_0006985g0030 Nicotiana tabacum HOM05D001353 ORTHO05D005187 3.5e-129 466.1 466 57.9
Lsat_1_v5_gn_1_34781 Lactuca sativa HOM05D001353 ORTHO05D005187 4.5e-129 465.7 501 53.1
THA.LOC104817973 Tarenaya hassleriana HOM05D001353 ORTHO05D005187 5.9e-129 465.3 499 55.7
CAN.G438.39 Capsicum annuum HOM05D001353 ORTHO05D005187 2.9e-128 463.0 464 55.4
Sp3g14600 Schrenkiella parvula HOM05D001353 ORTHO05D005187 2.9e-128 463.0 496 54.4
Cc04_g02860 Coffea canephora HOM05D001353 ORTHO05D005187 3.8e-128 462.6 548 50.9
SalBow2G1883 Salvia bowleyana HOM05D001353 ORTHO05D005187 3.8e-128 462.6 554 50.4
AL3G28930 Arabidopsis lyrata HOM05D001353 ORTHO05D005187 6.5e-128 461.8 486 56.2
Aa31LG8G3360 Aethionema arabicum HOM05D001353 ORTHO05D005187 9.4e-127 458.0 491 53.4
RcHm_v2.0_Chr2g0139461 Rosa chinensis HOM05D001353 ORTHO05D005187 1.6e-126 457.2 509 54.2
Hma1.2p1_0659F.1_g197330 Hydrangea macrophylla HOM05D001353 ORTHO05D005187 1.4e-125 454.1 510 51.8
PSO782G2586 Papaver somniferum HOM05D001353 ORTHO05D005187 6.7e-125 451.8 512 53.7
QL05p021238 Quercus lobata HOM05D001353 ORTHO05D005187 6.7e-125 451.8 333 72.7
Peaxi162Scf00015g00128 Petunia axillaris HOM05D001353 ORTHO05D005187 8.8e-125 451.4 444 57.9
PSO566G0332 Papaver somniferum HOM05D001353 ORTHO05D005187 1.5e-124 450.7 492 53.9
EL10Ac9g22047 Beta vulgaris HOM05D001353 ORTHO05D005187 1.7e-123 447.2 542 50.7
vmacro16977 Vaccinium macrocarpon HOM05D001353 ORTHO05D005187 2.2e-123 446.8 560 49.6
ECA247G1811 Erigeron canadensis HOM05D001353 ORTHO05D005187 2.4e-122 443.4 503 50.5
Migut.I00929 Erythranthe guttata HOM05D001353 ORTHO05D005187 1.2e-121 441.0 484 52.3
Manes.11G036600 Manihot esculenta HOM05D001353 ORTHO05D005187 2.6e-121 439.9 509 53.0
A03p39730 Brassica napus HOM05D001353 ORTHO05D005187 2.7e-118 429.9 436 55.0
DCAR_007575 Daucus carota HOM05D001353 ORTHO05D005187 3.6e-118 429.5 468 54.1
TWI12G1071 Tripterygium wilfordii HOM05D001353 ORTHO05D005187 3.6e-118 429.5 517 51.8
MBI01_g06185_MAGBIO Magnolia biondii HOM05D001353 ORTHO05D002359 1.4e-117 427.6 533 49.9
HanXRQChr04g0096261 Helianthus annuus HOM05D001353 ORTHO05D005187 1.2e-116 424.5 501 49.9
SGA_v2.0_scaffold5G02539 Striga asiatica HOM05D001353 ORTHO05D005187 1.3e-115 421.0 527 49.3
Gohir.D09G081500 Gossypium hirsutum HOM05D001353 ORTHO05D005187 1.7e-115 420.6 393 57.0
BraA03t13123Z Brassica rapa HOM05D001353 ORTHO05D005187 2.8e-115 419.9 442 54.8
CARHR091420 Cardamine hirsuta HOM05D001353 ORTHO05D005187 3.7e-115 419.5 336 66.7
Gorai.006G097100 Gossypium raimondii HOM05D001353 ORTHO05D005187 1.4e-114 417.5 521 47.6
ATR0315G016 Amborella trichopoda HOM05D001353 ORTHO05D005187 2.4e-114 416.8 353 64.3
Gohir.A09G081400 Gossypium hirsutum HOM05D001353 ORTHO05D005187 2.4e-114 416.8 457 52.3
Os01g0231900 Oryza sativa ssp. japonica HOM05D001353 ORTHO05D005187 1.6e-113 414.1 503 48.9
BcaC01g03834 Brassica carinata HOM05D001353 ORTHO05D005187 4.5e-113 412.5 436 54.4
BcaB04g18890 Brassica carinata HOM05D001353 ORTHO05D005187 1.5e-111 407.5 413 56.4
PGSC0003DMG401002551 Solanum tuberosum HOM05D001353 ORTHO05D005187 1.9e-111 407.1 491 50.1
Lj9A510G79 Lonicera japonica HOM05D001353 ORTHO05D005187 4.2e-111 406.0 465 52.5
AUR62031870 Chenopodium quinoa HOM05D001353 ORTHO05D005187 8.8e-109 398.3 444 54.3
HPP92_005271 Vanilla planifolia HOM05D001353 ORTHO05D005187 8.8e-109 398.3 453 53.0
CDE05G3629 Ceratophyllum demersum HOM05D001353 ORTHO05D005187 2.8e-107 393.3 496 48.0
Hund00659 Selenicereus undatus HOM05D001353 ORTHO05D005187 7.2e-103 378.6 414 53.1
C03p48170 Brassica napus HOM05D001353 ORTHO05D005187 2.8e-102 376.7 534 44.6
Psat1g005440 Pisum sativum HOM05D001353 ORTHO05D005187 9.8e-100 368.2 410 53.7
Nitab4.5_0011578g0030 Nicotiana tabacum HOM05D001353 ORTHO05D005187 3.7e-99 366.3 427 52.2
AT3G16230 Arabidopsis thaliana HOM05D001353 ORTHO05D005187 1.9e-87 327.4 397 51.1
AUR62022162 Chenopodium quinoa HOM05D001353 ORTHO05D005187 1.6e-86 324.3 511 44.8
Cpa.g.sc109.36 Carica papaya HOM05D001353 ORTHO05D005187 1.7e-83 314.3 187 82.4
Nitab4.5_0000568g0110 Nicotiana tabacum HOM05D001353 ORTHO05D005187 1.7e-83 314.3 290 58.6
BolC3t17020H Brassica oleracea HOM05D001353 ORTHO05D005187 1.1e-82 311.6 419 46.5
Gohir.A02G119300 Gossypium hirsutum HOM05D001353 ORTHO05D005187 1.9e-82 310.8 218 72.5
Actinidia21695 Actinidia chinensis HOM05D001353 ORTHO05D005187 1.2e-81 308.1 346 56.4
FAN05G1388 Fragaria x ananassa HOM05D001353 ORTHO05D005187 5.6e-79 299.3 383 50.4
ATR0315G123 Amborella trichopoda HOM05D001353 ORTHO05D005187 1.6e-78 297.7 281 57.7
AagrBONN_evm.TU.Sc2ySwM_368.659 Anthoceros agrestis HOM05D001353 ORTHO05D005187 6.8e-77 292.4 424 41.3
FAN14G4842 Fragaria x ananassa HOM05D001353 ORTHO05D005187 7.6e-76 288.9 386 48.4
HanXRQChr04g0096271 Helianthus annuus HOM05D001353 ORTHO05D005187 2.4e-74 283.9 351 46.4
Zm00001eb119210 Zea mays HOM05D001353 ORTHO05D005187 2.4e-74 283.9 320 50.3
Sc10g0007280 Simmondsia chinensis HOM05D001353 ORTHO05D005187 3.3e-71 273.5 310 53.5
Nitab4.5_0001591g0200 Nicotiana tabacum HOM05D001353 ORTHO05D005187 4.7e-70 269.6 287 53.3
Mapoly0110s0022 Marchantia polymorpha HOM05D001353 ORTHO05D005187 2.1e-65 254.2 445 37.8
Carub.0003s1597 Capsella rubella HOM05D001353 ORTHO05D005187 1.7e-64 251.1 276 50.0
CARHR091410 Cardamine hirsuta HOM05D001353 ORTHO05D005187 3.0e-64 250.4 275 48.4
CAN.G206.170 Capsicum annuum HOM05D001353 ORTHO05D005187 6.6e-64 249.2 194 62.4
COL.COLO4_30466 Corchorus olitorius HOM05D001353 ORTHO05D005187 5.6e-63 246.1 185 67.6
AL3G28920 Arabidopsis lyrata HOM05D001353 ORTHO05D005187 2.1e-62 244.2 276 47.1
Atru.chr1.3463 Acer truncatum HOM05D001353 ORTHO05D005187 2.0e-60 237.7 154 77.3
BcaC09g48591 Brassica carinata HOM05D001353 ORTHO05D005187 2.6e-60 237.3 276 45.3
Nitab4.5_0021337g0010 Nicotiana tabacum HOM05D001353 ORTHO05D005187 4.4e-60 236.5 266 53.4
BcaC01g03832 Brassica carinata HOM05D001353 ORTHO05D005187 1.1e-58 231.9 144 76.4
SMO340G0259 Selaginella moellendorffii HOM05D001353 ORTHO05D005187 2.7e-57 227.3 278 45.7
PGSC0003DMG400001428 Solanum tuberosum HOM05D001353 ORTHO05D005187 5.6e-55 219.5 167 65.3
Thhalv10021339m.g Eutrema salsugineum HOM05D001353 ORTHO05D005187 9.0e-53 212.2 278 43.9
BraA01t03849Z Brassica rapa HOM05D001353 ORTHO05D005187 4.5e-52 209.9 287 42.2
Solyc02g088200.4 Solanum lycopersicum HOM05D001353 ORTHO05D005187 9.9e-52 208.8 168 62.5
A01p37890 Brassica napus HOM05D001353 ORTHO05D005187 1.7e-51 208.0 287 42.2
C01p48010 Brassica napus HOM05D001353 ORTHO05D005187 2.2e-51 207.6 287 41.8
Sopen02g032890 Solanum pennellii HOM05D001353 ORTHO05D005187 4.9e-51 206.5 167 62.9
COL.COLO4_30465 Corchorus olitorius HOM05D000453 ORTHO05D000387 2.7e-49 200.7 275 46.5
Os01g0231800 Oryza sativa ssp. japonica HOM05D001353 ORTHO05D005187 2.7e-49 200.7 290 41.7
BcaC09g48592 Brassica carinata HOM05D001353 ORTHO05D005187 4.6e-49 199.9 280 40.7
Glyma.13G355900 Glycine max HOM05D001353 ORTHO05D005187 7.9e-49 199.1 191 58.1
SHI11057 Sapria himalayana HOM05D001353 ORTHO05D005187 1.8e-45 188.0 164 59.8
unitig_22.g6212 Utricularia gibba HOM05D001353 ORTHO05D005187 3.8e-43 180.3 121 72.7
CBR_g20332 Chara braunii HOM05D001353 ORTHO05D005187 1.1e-42 178.7 181 52.5
Sp3g14590 Schrenkiella parvula HOM05D001353 ORTHO05D005187 9.3e-42 175.6 180 50.6
Pp3c16_10470 Physcomitrium patens HOM05D001353 ORTHO05D005187 5.8e-36 156.4 251 36.7
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 8.4e-35 152.5 259 37.8
Gohir.A02G119400 Gossypium hirsutum HOM05D001353 ORTHO05D005187 8.4e-35 152.5 188 49.5
Nitab4.5_0000568g0120 Nicotiana tabacum HOM05D001353 ORTHO05D005187 1.6e-33 148.3 115 68.7
AT3G16220 Arabidopsis thaliana HOM05D001353 ORTHO05D005187 8.7e-32 142.5 189 42.9
Atru.chr1.3457 Acer truncatum HOM05D001353 ORTHO05D005187 5.7e-31 139.8 99 73.7
CANSAT56G3175 Cannabis sativa HOM05D001353 ORTHO05D005187 1.4e-29 135.2 142 52.8
Cre01.g008000 Chlamydomonas reinhardtii HOM05D001353 ORTHO05D005187 1.0e-27 129.0 402 24.9
Nitab4.5_0000568g0100 Nicotiana tabacum HOM05D001353 ORTHO05D005187 4.6e-25 120.2 163 44.8
BolC3t17095H Brassica oleracea HOM05D001353 ORTHO05D000017 5.7e-23 113.2 284 34.9
BolC3t17094H Brassica oleracea HOM05D001353 ORTHO05D005187 5.3e-21 106.7 175 37.1
C03p48160 Brassica napus HOM05D001353 ORTHO05D005187 1.2e-20 105.5 164 39.0
BcaC09g48593 Brassica carinata HOM05D001353 ORTHO05D005187 1.6e-17 95.1 88 50.0
MCO06G129 Micromonas commoda HOM05D001353 ORTHO05D005187 1.0e-16 92.4 183 31.7
Medtr8g033020 Medicago truncatula HOM05D001353 ORTHO05D005187 2.3e-16 91.3 51 74.5
ATR0315G092 Amborella trichopoda HOM05D001353 ORTHO05D005187 5.1e-16 90.1 63 65.1
SEGI_15304 Sequoiadendron giganteum HOM05D001353 ORTHO05D005187 4.4e-15 87.0 66 59.1
FvH4_4g23310 Fragaria vesca HOM05D001353 ORTHO05D005187 3.1e-13 80.9 131 42.0
FAN12G2992 Fragaria x ananassa HOM05D001353 ORTHO05D005187 3.1e-13 80.9 131 42.0
Cpa.g.c32037 Carica papaya HOM05D001353 ORTHO05D005187 2.6e-12 77.8 92 53.3
FAN02G1855 Fragaria x ananassa HOM05D001353 ORTHO05D005187 9.4e-10 69.3 41 80.5
unitig_22.g6211 Utricularia gibba HOM05D001353 ORTHO05D005187 9.4e-10 69.3 185 31.9
Psat1g156000 Pisum sativum HOM05D001353 ORTHO05D005187 6.7e-08 63.2 30 96.7
SHI11059 Sapria himalayana HOM05D001353 ORTHO05D005187 2.6e-07 61.2 37 78.4
SHI11060 Sapria himalayana HOM05D001353 ORTHO05D005187 3.7e-06 57.4 50 60.0

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (3 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (7 genes)
Brassica napus (5 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (2 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (5 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (7 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (3 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings