Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01195 Eucalyptus grandis HOM05D032970 ORTHO05D192966 1.1e-259 899.4 471 100.0
Eucgr.L01513 Eucalyptus grandis HOM05D032970 ORTHO05D193419 2.8e-64 250.4 130 99.2
Eucgr.F01212 Eucalyptus grandis HOM05D000603 ORTHO05D002962 2.1e-27 127.9 78 78.2
Eucgr.F01216 Eucalyptus grandis HOM05D032970 ORTHO05D194400 1.2e-22 112.1 58 87.9
Eucgr.F01219 Eucalyptus grandis HOM05D000603 ORTHO05D002962 8.3e-16 89.4 223 39.0
arahy.Tifrunner.gnm1.ann1.5AER9B Arachis hypogaea HOM05D000603 ORTHO05D002962 2.0e-09 68.2 126 38.9
Eucgr.L01515 Eucalyptus grandis HOM05D000603 ORTHO05D002962 2.0e-09 68.2 33 93.9
arahy.Tifrunner.gnm1.ann1.97KWX8 Arachis hypogaea HOM05D000603 ORTHO05D002962 3.4e-09 67.4 86 46.5
arahy.Tifrunner.gnm1.ann1.MA816V Arachis hypogaea HOM05D000603 ORTHO05D002962 3.4e-09 67.4 86 46.5
arahy.Tifrunner.gnm1.ann1.PN9IID Arachis hypogaea HOM05D000603 ORTHO05D002962 3.4e-09 67.4 86 46.5
Os09g0509000 Oryza sativa ssp. japonica HOM05D000603 ORTHO05D002962 3.4e-09 67.4 229 33.6
Medtr2g078090 Medicago truncatula HOM05D000603 ORTHO05D002962 5.7e-09 66.6 86 45.3
Potri.001G393400 Populus trichocarpa HOM05D000603 ORTHO05D002962 5.7e-09 66.6 38 78.9
TWI38G0354 Tripterygium wilfordii HOM05D000603 ORTHO05D002962 5.7e-09 66.6 83 44.6
CAN.G1119.12 Capsicum annuum HOM05D000603 ORTHO05D002962 7.5e-09 66.2 38 76.3
CAN.G292.4 Capsicum annuum HOM05D000603 ORTHO05D002962 7.5e-09 66.2 38 76.3
Lj9A124T27 Lonicera japonica HOM05D000603 ORTHO05D002962 9.8e-09 65.9 44 63.6
Nitab4.5_0000383g0290 Nicotiana tabacum HOM05D000603 ORTHO05D002962 9.8e-09 65.9 82 47.6
Sabra16G0258100 Salix brachista HOM05D000603 ORTHO05D002962 9.8e-09 65.9 72 50.0
Sopen10g003300 Solanum pennellii HOM05D000603 ORTHO05D002962 9.8e-09 65.9 164 34.8
ATR0602G277 Amborella trichopoda HOM05D000603 ORTHO05D002962 1.3e-08 65.5 217 33.2
Eucgr.F01213 Eucalyptus grandis HOM05D000603 ORTHO05D002962 1.3e-08 65.5 33 90.9
Lj3P163T14 Lonicera japonica HOM05D000603 ORTHO05D002962 1.3e-08 65.5 38 76.3
Lj9A128T47 Lonicera japonica HOM05D000603 ORTHO05D002962 1.3e-08 65.5 44 61.4
Lju359C0T2 Lonicera japonica HOM05D000603 ORTHO05D002962 1.3e-08 65.5 38 76.3
Solyc10g007180.2 Solanum lycopersicum HOM05D000603 ORTHO05D002962 1.3e-08 65.5 164 34.8
vmacro22163 Vaccinium macrocarpon HOM05D000603 ORTHO05D002962 1.3e-08 65.5 38 73.7
Nitab4.5_0001208g0010 Nicotiana tabacum HOM05D000603 ORTHO05D002962 1.7e-08 65.1 38 76.3
Psat5g239760 Pisum sativum HOM05D000603 ORTHO05D002962 1.7e-08 65.1 36 77.8
vmacro11917 Vaccinium macrocarpon HOM05D000603 ORTHO05D002962 1.7e-08 65.1 38 73.7
MSTRG.14223 Avicennia marina HOM05D000603 ORTHO05D002962 2.2e-08 64.7 38 76.3
Peaxi162Scf00027g00058 Petunia axillaris HOM05D000603 ORTHO05D002962 2.2e-08 64.7 38 76.3
Peaxi162Scf00934g00134 Petunia axillaris HOM05D000603 ORTHO05D002962 2.2e-08 64.7 38 76.3
PGSC0003DMG400021272 Solanum tuberosum HOM05D000603 ORTHO05D002962 2.2e-08 64.7 164 34.1
THA.LOC104810444 Tarenaya hassleriana HOM05D000603 ORTHO05D002962 2.2e-08 64.7 38 73.7
VMungo1080G0181 Vigna mungo HOM05D000603 ORTHO05D002962 2.2e-08 64.7 38 73.7
Ca_04005_v3 Cicer arietinum L. HOM05D000603 ORTHO05D002962 2.8e-08 64.3 38 76.3
Lj3g0008870 Lotus japonicus HOM05D000603 ORTHO05D002962 2.8e-08 64.3 38 76.3
Lalb_Chr25g0285981 Lupinus albus HOM05D000603 ORTHO05D002962 2.8e-08 64.3 38 73.7
Oeu051117.2 Olea europaea HOM05D000603 ORTHO05D002962 2.8e-08 64.3 126 35.7
Potri.011G112200 Populus trichocarpa HOM05D000603 ORTHO05D002962 2.8e-08 64.3 38 73.7
Nitab4.5_0000035g0110 Nicotiana tabacum HOM05D000603 ORTHO05D002962 3.7e-08 63.9 38 73.7
PGR083G0905 Punica granatum HOM05D000603 ORTHO05D002962 3.7e-08 63.9 162 34.6
Solyc12g014230.2 Solanum lycopersicum HOM05D000603 ORTHO05D002962 3.7e-08 63.9 38 73.7
Sopen12g006020 Solanum pennellii HOM05D000603 ORTHO05D002962 3.7e-08 63.9 38 73.7
PGSC0003DMG400015383 Solanum tuberosum HOM05D000603 ORTHO05D002962 3.7e-08 63.9 38 73.7
Glyma.12G228400 Glycine max HOM05D000603 ORTHO05D002962 4.9e-08 63.5 38 71.1
Glyma.13G271400 Glycine max HOM05D000603 ORTHO05D002962 4.9e-08 63.5 38 71.1
Phvul.005G067700 Phaseolus vulgaris HOM05D000603 ORTHO05D002962 4.9e-08 63.5 38 71.1
QL11p056780 Quercus lobata HOM05D000603 ORTHO05D002962 4.9e-08 63.5 38 73.7
Carub.0003s1466 Capsella rubella HOM05D000603 ORTHO05D002962 6.3e-08 63.2 38 73.7
Cpa.g.sc131.58 Carica papaya HOM05D000603 ORTHO05D002962 6.3e-08 63.2 44 68.2
Manes.15G092300 Manihot esculenta HOM05D000603 ORTHO05D002962 6.3e-08 63.2 38 73.7
Nn1g04386 Nelumbo nucifera HOM05D000603 ORTHO05D002962 6.3e-08 63.2 38 73.7
Nn1g09085 Nelumbo nucifera HOM05D000603 ORTHO05D002962 6.3e-08 63.2 38 73.7
Nitab4.5_0005440g0030 Nicotiana tabacum HOM05D000603 ORTHO05D002962 6.3e-08 63.2 36 75.0
TWI38G1936 Tripterygium wilfordii HOM05D000603 ORTHO05D002962 6.3e-08 63.2 38 73.7
unitig_26.g9519 Utricularia gibba HOM05D000603 ORTHO05D002962 6.3e-08 63.2 38 73.7
unitig_749.g13535 Utricularia gibba HOM05D000603 ORTHO05D002962 6.3e-08 63.2 38 73.7
BcaB06g25343 Brassica carinata HOM05D000603 ORTHO05D002962 8.3e-08 62.8 73 45.2
BcaB06g29529 Brassica carinata HOM05D000603 ORTHO05D002962 8.3e-08 62.8 73 45.2
C05p52180 Brassica napus HOM05D000603 ORTHO05D002962 8.3e-08 62.8 73 45.2
BolC5t33902H Brassica oleracea HOM05D000603 ORTHO05D002962 8.3e-08 62.8 73 45.2
CiPaw.11G162300 Carya illinoinensis HOM05D000603 ORTHO05D002962 8.3e-08 62.8 38 73.7
Migut.H01981 Erythranthe guttata HOM05D000603 ORTHO05D002962 8.3e-08 62.8 175 34.3
HanXRQChr11g0331331 Helianthus annuus HOM05D000603 ORTHO05D002962 8.3e-08 62.8 106 35.8
Lalb_Chr01g0016661 Lupinus albus HOM05D000603 ORTHO05D002962 8.3e-08 62.8 38 73.7
MBI03_g44736_MAGBIO Magnolia biondii HOM05D000603 ORTHO05D002962 8.3e-08 62.8 38 73.7
Actinidia12559 Actinidia chinensis HOM05D000603 ORTHO05D002962 1.1e-07 62.4 38 71.1
Aqoxy1G03175 Aquilegia oxysepala HOM05D000603 ORTHO05D002962 1.1e-07 62.4 38 71.1
DCAR_019591 Daucus carota HOM05D000603 ORTHO05D002962 1.1e-07 62.4 38 71.1
Lj1C832T7 Lonicera japonica HOM05D000603 ORTHO05D002962 1.1e-07 62.4 38 71.1
Sed0026437 Sechium edule HOM05D000603 ORTHO05D002962 1.1e-07 62.4 156 34.6
A05p34420 Brassica napus HOM05D000603 ORTHO05D002962 1.4e-07 62.0 38 71.1
BraA05t22261Z Brassica rapa HOM05D000603 ORTHO05D002962 1.4e-07 62.0 38 71.1
CANSAT35G0382 Cannabis sativa HOM05D000603 ORTHO05D002962 1.4e-07 62.0 38 73.7
Dinv18349 Davidia involucrata HOM05D000603 ORTHO05D002962 1.4e-07 62.0 38 71.1
MBI13_g36732_MAGBIO Magnolia biondii HOM05D000603 ORTHO05D002962 1.4e-07 62.0 74 47.3
Oeu061347.1 Olea europaea HOM05D000603 ORTHO05D002962 1.4e-07 62.0 167 35.9
Sabra11G0099400 Salix brachista HOM05D000603 ORTHO05D002962 1.4e-07 62.0 38 71.1
SGA_v2.0_scaffold70G23710 Striga asiatica HOM05D000603 ORTHO05D002962 1.4e-07 62.0 168 34.5
AL1G61680 Arabidopsis lyrata HOM05D000603 ORTHO05D002962 1.8e-07 61.6 38 76.3
Haze_09345 Corylus avellana HOM05D000603 ORTHO05D002962 1.8e-07 61.6 38 68.4
DCAR_003707 Daucus carota HOM05D000603 ORTHO05D002962 1.8e-07 61.6 38 71.1
Lj3g0011854 Lotus japonicus HOM05D000603 ORTHO05D002962 1.8e-07 61.6 86 41.9
Sed0015464 Sechium edule HOM05D000603 ORTHO05D002962 1.8e-07 61.6 38 71.1
Cfa019587 Carpinus fangiana HOM05D000603 ORTHO05D002962 2.4e-07 61.2 38 68.4
Dinv15457 Davidia involucrata HOM05D000603 ORTHO05D002962 2.4e-07 61.2 88 40.9
ECA236G2711 Erigeron canadensis HOM05D000603 ORTHO05D002962 2.4e-07 61.2 39 64.1
HanXRQChr10g0304851 Helianthus annuus HOM05D000603 ORTHO05D002962 2.4e-07 61.2 39 66.7
Lsat_1_v5_gn_7_103261 Lactuca sativa HOM05D000603 ORTHO05D002962 2.4e-07 61.2 39 66.7
Lalb_Chr01g0006761 Lupinus albus HOM05D000603 ORTHO05D002962 2.4e-07 61.2 38 71.1
PSO541G0477 Papaver somniferum HOM05D000603 ORTHO05D002962 2.4e-07 61.2 38 65.8
PSO675G2810 Papaver somniferum HOM05D000603 ORTHO05D002962 2.4e-07 61.2 38 65.8
PSO675G3525 Papaver somniferum HOM05D000603 ORTHO05D002962 2.4e-07 61.2 38 65.8
ATR0681G239 Amborella trichopoda HOM05D000603 ORTHO05D002962 3.1e-07 60.8 38 71.1
Ciclev10008185m.g Citrus clementina HOM05D000603 ORTHO05D002962 3.1e-07 60.8 35 77.1
Dinv14974 Davidia involucrata HOM05D000603 ORTHO05D002962 3.1e-07 60.8 35 74.3
Thhalv10020847m.g Eutrema salsugineum HOM05D000603 ORTHO05D002962 3.1e-07 60.8 38 71.1
SGA_v2.0_scaffold130G34310 Striga asiatica HOM05D000603 ORTHO05D002962 3.1e-07 60.8 314 27.1
AT3G15000 Arabidopsis thaliana HOM05D000603 ORTHO05D002962 4.1e-07 60.5 38 68.4
CSS0008226 Camellia sinensis var. sinensis HOM05D000603 ORTHO05D002962 4.1e-07 60.5 162 34.6
CSS0021694 Camellia sinensis var. sinensis HOM05D000603 ORTHO05D002962 4.1e-07 60.5 162 34.6
CSS0029084 Camellia sinensis var. sinensis HOM05D000603 ORTHO05D002962 4.1e-07 60.5 162 34.6
CARHR089960 Cardamine hirsuta HOM05D000603 ORTHO05D002962 4.1e-07 60.5 38 71.1
ClCG07G010040 Citrullus lanatus HOM05D000603 ORTHO05D002962 4.1e-07 60.5 160 33.1
Sp3g13200 Schrenkiella parvula HOM05D000603 ORTHO05D002962 4.1e-07 60.5 38 68.4
vmacro11916 Vaccinium macrocarpon HOM05D000603 ORTHO05D002962 4.1e-07 60.5 38 71.1
AL3G27330 Arabidopsis lyrata HOM05D000603 ORTHO05D002962 5.4e-07 60.1 38 68.4
AL975U10010 Arabidopsis lyrata HOM05D000603 ORTHO05D002962 5.4e-07 60.1 38 68.4
Lsat_1_v5_gn_5_127341 Lactuca sativa HOM05D000603 ORTHO05D002962 5.4e-07 60.1 39 64.1
PSO541G4172 Papaver somniferum HOM05D000603 ORTHO05D002962 5.4e-07 60.1 38 63.2
Rhsim06G0205800 Rhododendron simsii HOM05D000603 ORTHO05D002962 5.4e-07 60.1 42 64.3
SHI21681 Sapria himalayana HOM05D000603 ORTHO05D002962 5.4e-07 60.1 36 72.2
SEGI_14471 Sequoiadendron giganteum HOM05D000603 ORTHO05D002962 5.4e-07 60.1 38 68.4
SEGI_28337 Sequoiadendron giganteum HOM05D000603 ORTHO05D002962 5.4e-07 60.1 38 68.4
TAR627G1122 Trochodendron aralioides HOM05D000603 ORTHO05D002962 5.4e-07 60.1 145 36.6
BcaB04g20953 Brassica carinata HOM05D000603 ORTHO05D002962 7.0e-07 59.7 36 69.4
THA.LOC104815568 Tarenaya hassleriana HOM05D000603 ORTHO05D002962 7.0e-07 59.7 38 65.8
Rhsim06G0205900 Rhododendron simsii HOM05D000603 ORTHO05D002962 9.1e-07 59.3 223 28.7
TAR629G2858 Trochodendron aralioides HOM05D000603 ORTHO05D002962 9.1e-07 59.3 38 65.8
Aa31LG10G10900 Aethionema arabicum HOM05D000603 ORTHO05D002962 1.6e-06 58.5 38 68.4
Aa31LG8G2220 Aethionema arabicum HOM05D000603 ORTHO05D002962 1.6e-06 58.5 38 68.4
ECA234G2000 Erigeron canadensis HOM05D000603 ORTHO05D002962 1.6e-06 58.5 39 61.5
HanXRQChr15g0494681 Helianthus annuus HOM05D000603 ORTHO05D002962 1.6e-06 58.5 39 61.5
Medtr1g009840 Medicago truncatula HOM05D000603 ORTHO05D002962 1.6e-06 58.5 79 41.8
BcaC01g03908 Brassica carinata HOM05D000603 ORTHO05D002962 2.0e-06 58.2 38 71.1
A03p39090 Brassica napus HOM05D000603 ORTHO05D002962 2.0e-06 58.2 38 71.1
C03p47370 Brassica napus HOM05D000603 ORTHO05D002962 2.0e-06 58.2 38 71.1
BolC3t17007H Brassica oleracea HOM05D000603 ORTHO05D002962 2.0e-06 58.2 38 71.1
BraA03t13058Z Brassica rapa HOM05D000603 ORTHO05D002962 2.0e-06 58.2 38 71.1
CANSAT01G2172 Cannabis sativa HOM05D000603 ORTHO05D002962 2.7e-06 57.8 38 71.1
MELO3C016106.2 Cucumis melo HOM05D000603 ORTHO05D002962 2.7e-06 57.8 57 52.6
Prupe.4G168200 Prunus persica HOM05D000603 ORTHO05D002962 2.7e-06 57.8 38 71.1
Thhalv10012347m.g Eutrema salsugineum HOM05D000603 ORTHO05D002962 4.5e-06 57.0 35 71.4
Lj2g0024427 Lotus japonicus HOM05D000603 ORTHO05D002962 4.5e-06 57.0 73 41.1
CsaV3_4G008290 Cucumis sativus L. HOM05D000603 ORTHO05D002962 5.9e-06 56.6 213 30.0
Gohir.D01G043500 Gossypium hirsutum HOM05D000603 ORTHO05D002962 7.7e-06 56.2 38 68.4
Gorai.002G062600 Gossypium raimondii HOM05D000603 ORTHO05D002962 7.7e-06 56.2 38 68.4
Lj6g0001634 Lotus japonicus HOM05D000603 ORTHO05D002962 7.7e-06 56.2 39 61.5
MD03G1240700 Malus domestica HOM05D000603 ORTHO05D002962 7.7e-06 56.2 38 68.4

Acer truncatum (0 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (3 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (7 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (2 genes)
Gossypium hirsutum (1 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (5 genes)
Lotus japonicus (4 genes)
Lupinus albus (3 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (0 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings