Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02487 Eucalyptus grandis HOM05D000081 ORTHO05D007129 1.6e-62 242.7 127 100.0
Eucgr.C02545 Eucalyptus grandis HOM05D000081 ORTHO05D007129 6.0e-54 214.2 112 98.2
Eucgr.C02481 Eucalyptus grandis HOM05D000081 ORTHO05D007129 1.0e-53 213.4 112 97.3
Haze_19208 Corylus avellana HOM05D000081 ORTHO05D007129 2.1e-43 179.1 112 83.0
QL02p093197 Quercus lobata HOM05D000081 ORTHO05D007129 6.2e-43 177.6 111 82.0
Glyma.02G203800 Glycine max HOM05D000081 ORTHO05D007129 8.1e-43 177.2 112 82.1
CiPaw.16G111300 Carya illinoinensis HOM05D000081 ORTHO05D007129 1.4e-42 176.4 112 82.1
Duzib168G1343 Durio zibethinus HOM05D000081 ORTHO05D007129 1.4e-42 176.4 112 80.4
Glyma.17G074000 Glycine max HOM05D000081 ORTHO05D007129 1.8e-42 176.0 112 81.2
CANSAT11G0934 Cannabis sativa HOM05D000081 ORTHO05D007129 3.1e-42 175.3 112 80.4
Prupe.7G262600 Prunus persica HOM05D000081 ORTHO05D007129 6.9e-42 174.1 112 78.6
Atru.chr7.53 Acer truncatum HOM05D000081 ORTHO05D007129 1.5e-41 172.9 112 79.5
ClCG06G012400 Citrullus lanatus HOM05D000081 ORTHO05D007129 1.5e-41 172.9 112 79.5
Thecc.09G031100 Theobroma cacao HOM05D000081 ORTHO05D007129 1.5e-41 172.9 112 79.5
Phvul.003G156300 Phaseolus vulgaris HOM05D000081 ORTHO05D007129 2.0e-41 172.6 112 79.5
VMungo1215G1089 Vigna mungo HOM05D000081 ORTHO05D007129 3.4e-41 171.8 112 79.5
TWI32G1130 Tripterygium wilfordii HOM05D000081 ORTHO05D007129 4.5e-41 171.4 112 77.7
Ciclev10008135m.g Citrus clementina HOM05D000081 ORTHO05D007129 2.9e-40 168.7 112 78.6
Lj4g0001781 Lotus japonicus HOM05D000081 ORTHO05D007129 2.9e-40 168.7 112 77.7
Ca_21125_v3 Cicer arietinum L. HOM05D000081 ORTHO05D007129 3.8e-40 168.3 112 78.6
Sabra18G0091200 Salix brachista HOM05D000081 ORTHO05D007129 4.9e-40 167.9 114 78.1
Gohir.A06G097400 Gossypium hirsutum HOM05D000081 ORTHO05D007129 8.4e-40 167.2 112 75.9
Gohir.D06G098100 Gossypium hirsutum HOM05D000081 ORTHO05D007129 8.4e-40 167.2 112 75.9
TPR.G24876 Trifolium pratense HOM05D000081 ORTHO05D007129 8.4e-40 167.2 112 77.7
TWI34G0929 Tripterygium wilfordii HOM05D000081 ORTHO05D007129 1.4e-39 166.4 113 77.0
arahy.Tifrunner.gnm1.ann1.5041YP Arachis hypogaea HOM05D000081 ORTHO05D007129 1.9e-39 166.0 113 77.9
MD02G1007900 Malus domestica HOM05D000081 ORTHO05D007129 1.9e-39 166.0 112 76.8
Gorai.010G113000 Gossypium raimondii HOM05D000081 ORTHO05D007129 2.4e-39 165.6 112 75.0
Potri.018G107000 Populus trichocarpa HOM05D000081 ORTHO05D007129 3.2e-39 165.2 114 77.2
GSVIVG01023600001 Vitis vinifera HOM05D000081 ORTHO05D007129 3.2e-39 165.2 112 75.9
CsaV3_1G028960 Cucumis sativus L. HOM05D000081 ORTHO05D007129 4.2e-39 164.9 113 78.8
Gohir.A07G026900 Gossypium hirsutum HOM05D000081 ORTHO05D007129 5.4e-39 164.5 112 76.8
TWI63G0304 Tripterygium wilfordii HOM05D000081 ORTHO05D007129 9.3e-39 163.7 112 75.0
MELO3C010223.2 Cucumis melo HOM05D000081 ORTHO05D007129 1.2e-38 163.3 113 77.9
Duzib150G1372 Durio zibethinus HOM05D000081 ORTHO05D007129 1.2e-38 163.3 112 75.9
Gohir.D07G030900 Gossypium hirsutum HOM05D000081 ORTHO05D007129 3.5e-38 161.8 112 75.9
Gorai.001G032200 Gossypium raimondii HOM05D000081 ORTHO05D007129 3.5e-38 161.8 112 75.9
Psat4g109320 Pisum sativum HOM05D000081 ORTHO05D007129 3.5e-38 161.8 113 77.0
Sed0002449 Sechium edule HOM05D000081 ORTHO05D007129 6.0e-38 161.0 112 75.9
Dinv41382 Davidia involucrata HOM05D000081 ORTHO05D007129 1.3e-37 159.8 112 73.2
Lj7A458T48 Lonicera japonica HOM05D000081 ORTHO05D007129 1.3e-37 159.8 112 72.3
Manes.14G112740 Manihot esculenta HOM05D000081 ORTHO05D007129 1.3e-37 159.8 114 74.6
COL.COLO4_18806 Corchorus olitorius HOM05D000081 ORTHO05D007129 2.3e-37 159.1 132 65.9
Duzib187G0632 Durio zibethinus HOM05D000081 ORTHO05D007129 3.9e-37 158.3 111 74.8
PGR102G0610 Punica granatum HOM05D000081 ORTHO05D007129 3.9e-37 158.3 112 73.2
Dinv42858 Davidia involucrata HOM05D000081 ORTHO05D007129 1.1e-36 156.8 112 71.4
Dinv43242 Davidia involucrata HOM05D000081 ORTHO05D007129 1.1e-36 156.8 112 71.4
Hma1.2p1_0222F.1_g093530 Hydrangea macrophylla HOM05D000081 ORTHO05D007129 1.1e-36 156.8 112 71.4
Lalb_Chr23g0275691 Lupinus albus HOM05D000081 ORTHO05D007129 1.1e-36 156.8 112 69.6
Potri.006G184800 Populus trichocarpa HOM05D000081 ORTHO05D007129 1.5e-36 156.4 115 74.8
Nitab4.5_0005653g0010 Nicotiana tabacum HOM05D000081 ORTHO05D007129 1.9e-36 156.0 112 70.5
Phvul.009G195200 Phaseolus vulgaris HOM05D000081 ORTHO05D007129 1.9e-36 156.0 112 72.3
Actinidia38324 Actinidia chinensis HOM05D000081 ORTHO05D007129 2.5e-36 155.6 112 71.4
PGSC0003DMG400011186 Solanum tuberosum HOM05D000081 ORTHO05D007129 4.3e-36 154.8 112 69.6
Cc06_g15010 Coffea canephora HOM05D000081 ORTHO05D007129 5.6e-36 154.5 112 72.3
Glyma.06G219800 Glycine max HOM05D000081 ORTHO05D007129 7.4e-36 154.1 112 70.5
Nitab4.5_0001571g0040 Nicotiana tabacum HOM05D000081 ORTHO05D007129 9.6e-36 153.7 112 70.5
Glyma.12G152600 Glycine max HOM05D000081 ORTHO05D007129 1.3e-35 153.3 112 70.5
Lj6g0010249 Lotus japonicus HOM05D000081 ORTHO05D007129 1.3e-35 153.3 112 72.3
Actinidia04298 Actinidia chinensis HOM05D000081 ORTHO05D007129 1.6e-35 152.9 112 70.5
Lalb_Chr08g0234161 Lupinus albus HOM05D000081 ORTHO05D007129 1.6e-35 152.9 120 68.3
Solyc07g005650.4 Solanum lycopersicum HOM05D000081 ORTHO05D007129 3.7e-35 151.8 112 67.9
CSS0035298 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D007129 4.8e-35 151.4 112 72.3
Sopen07g001750 Solanum pennellii HOM05D000081 ORTHO05D007129 2.4e-34 149.1 112 67.9
Rhsim01G0033600 Rhododendron simsii HOM05D000081 ORTHO05D007129 4.0e-34 148.3 113 70.8
RcHm_v2.0_Chr2g0085691 Rosa chinensis HOM05D000081 ORTHO05D007129 4.0e-34 148.3 151 57.6
FvH4_1g00960 Fragaria vesca HOM05D000081 ORTHO05D007129 6.9e-34 147.5 125 64.8
FAN28G0131 Fragaria x ananassa HOM05D000081 ORTHO05D007129 6.9e-34 147.5 125 64.8
FAN23G2601 Fragaria x ananassa HOM05D000081 ORTHO05D007129 9.0e-34 147.1 125 64.8
FAN26G1513 Fragaria x ananassa HOM05D000081 ORTHO05D007129 9.0e-34 147.1 125 64.8
Eucgr.C00348 Eucalyptus grandis HOM05D000081 ORTHO05D007129 2.0e-33 146.0 110 65.5
Peaxi162Scf00401g00087 Petunia axillaris HOM05D000081 ORTHO05D007129 2.0e-33 146.0 112 67.0
arahy.Tifrunner.gnm1.ann1.A6JJY3 Arachis hypogaea HOM05D000081 ORTHO05D007129 4.5e-33 144.8 113 69.9
CSS0019008 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D007129 2.9e-32 142.1 122 64.8
CAN.G160.57 Capsicum annuum HOM05D000081 ORTHO05D007129 8.4e-32 140.6 113 68.1
Aa31LG2G19410 Aethionema arabicum HOM05D000081 ORTHO05D007129 1.8e-29 132.9 112 64.3
AL7G21150 Arabidopsis lyrata HOM05D000081 ORTHO05D007129 3.9e-29 131.7 113 65.5
VMungo1309G0985 Vigna mungo HOM05D000081 ORTHO05D007129 5.1e-29 131.3 108 67.6
CARHR238830 Cardamine hirsuta HOM05D000081 ORTHO05D007129 8.7e-29 130.6 112 61.6
Nn2g12372 Nelumbo nucifera HOM05D000081 ORTHO05D007129 8.7e-29 130.6 113 62.8
Sp7g28810 Schrenkiella parvula HOM05D000081 ORTHO05D007129 1.9e-28 129.4 113 64.6
TAR383G0044 Trochodendron aralioides HOM05D000081 ORTHO05D007129 1.9e-28 129.4 111 62.2
AT4G30935 Arabidopsis thaliana HOM05D000081 ORTHO05D007129 7.4e-28 127.5 113 63.7
Carub.0007s0961 Capsella rubella HOM05D000081 ORTHO05D007129 3.7e-27 125.2 112 59.8
Thhalv10025126m.g Eutrema salsugineum HOM05D000081 ORTHO05D007129 8.2e-27 124.0 113 62.8
THA.LOC104819904 Tarenaya hassleriana HOM05D000081 ORTHO05D007129 1.8e-26 122.9 112 62.5
Oeu012296.1 Olea europaea HOM05D000081 ORTHO05D007129 4.0e-26 121.7 112 58.9
BcaB03g12667 Brassica carinata HOM05D000081 ORTHO05D007129 9.0e-26 120.6 112 59.8
BraA08t33862Z Brassica rapa HOM05D000081 ORTHO05D007129 1.2e-25 120.2 114 60.5
Migut.K00328 Erythranthe guttata HOM05D000081 ORTHO05D007129 1.2e-25 120.2 130 53.8
BcaC01g01130 Brassica carinata HOM05D000081 ORTHO05D007129 2.6e-25 119.0 112 59.8
C03p88430 Brassica napus HOM05D000081 ORTHO05D007129 2.6e-25 119.0 112 59.8
BolC3t21152H Brassica oleracea HOM05D000081 ORTHO05D007129 2.6e-25 119.0 112 59.8
Nn8g39887 Nelumbo nucifera HOM05D000081 ORTHO05D007129 3.4e-25 118.6 111 57.7
A08p19010 Brassica napus HOM05D000081 ORTHO05D007129 5.8e-25 117.9 113 58.4
MSTRG.6136 Avicennia marina HOM05D000081 ORTHO05D007129 2.9e-24 115.5 112 56.2
GSVIVG01035965001 Vitis vinifera HOM05D000081 ORTHO05D007129 1.9e-23 112.8 111 55.0
Medtr4g130900 Medicago truncatula HOM05D000081 ORTHO05D007129 5.5e-23 111.3 111 57.7
PSO561G0055 Papaver somniferum HOM05D000081 ORTHO05D007129 9.3e-23 110.5 110 52.7
Aqoxy7G03408 Aquilegia oxysepala HOM05D000081 ORTHO05D007129 5.1e-21 104.8 113 52.2
MD15G1152100 Malus domestica HOM05D000081 ORTHO05D007129 8.7e-21 104.0 55 90.9
SGA_v2.0_scaffold12G05993 Striga asiatica HOM05D000081 ORTHO05D007129 1.1e-20 103.6 112 54.5
TAR625G1281 Trochodendron aralioides HOM05D000081 ORTHO05D007129 3.3e-20 102.1 97 57.7
Migut.J01340 Erythranthe guttata HOM05D000081 ORTHO05D007129 2.2e-19 99.4 110 48.2
Manes.03G008900 Manihot esculenta HOM05D000081 ORTHO05D007129 6.3e-19 97.8 112 50.9
Manes.16G129500 Manihot esculenta HOM05D000081 ORTHO05D007129 8.2e-19 97.4 113 47.8
TAR626G1338 Trochodendron aralioides HOM05D000081 ORTHO05D007129 8.2e-19 97.4 95 55.8
Ah.16g105050 Amaranthus hybridus HOM05D000081 ORTHO05D007129 3.4e-17 92.0 112 44.6
Potri.006G264000 Populus trichocarpa HOM05D000081 ORTHO05D007129 1.0e-16 90.5 121 43.0
Sc23g0006360 Simmondsia chinensis HOM05D000081 ORTHO05D007129 1.3e-16 90.1 113 46.9
EL10Ac2g04110 Beta vulgaris HOM05D000081 ORTHO05D007129 3.8e-16 88.6 112 46.4
Sabra18G0021700 Salix brachista HOM05D000688 ORTHO05D004737 1.9e-15 86.3 111 45.9
MSTRG.26278 Avicennia marina HOM05D000081 ORTHO05D007129 3.2e-15 85.5 94 50.0
Sabra06G0206400 Salix brachista HOM05D000081 ORTHO05D007129 5.5e-15 84.7 113 46.9
CDE04G0578 Ceratophyllum demersum HOM05D000081 ORTHO05D000036 5.1e-13 78.2 105 44.8
AUR62009363 Chenopodium quinoa HOM05D000081 ORTHO05D007129 8.8e-13 77.4 147 34.7
Oeu050492.2 Olea europaea HOM05D000081 ORTHO05D007129 4.3e-12 75.1 64 54.7
A03p60410 Brassica napus HOM05D000081 ORTHO05D007129 7.4e-12 74.3 83 51.8
BraA03t15081Z Brassica rapa HOM05D000081 ORTHO05D007129 7.4e-12 74.3 83 51.8
BcaNung01553 Brassica carinata HOM05D000081 ORTHO05D007129 9.7e-12 73.9 71 53.5
BcaNung02732 Brassica carinata HOM05D000081 ORTHO05D007129 1.3e-11 73.6 84 51.2
AUR62023044 Chenopodium quinoa HOM05D000081 ORTHO05D007129 3.7e-11 72.0 146 34.9
Oeu039988.2 Olea europaea HOM05D000081 ORTHO05D007129 3.7e-11 72.0 56 60.7
SGA_v2.0_scaffold265G46108 Striga asiatica HOM05D001252 ORTHO05D007129 8.2e-11 70.9 56 60.7
C07p58270 Brassica napus HOM05D003775 ORTHO05D004314 3.1e-10 68.9 84 48.8
BolC7t46286H Brassica oleracea HOM05D002576 ORTHO05D002696 3.1e-10 68.9 84 48.8
Zm00001eb176740 Zea mays HOM05D000081 ORTHO05D000036 1.2e-09 67.0 115 37.4
HanXRQChr03g0064891 Helianthus annuus HOM05D000081 ORTHO05D007129 3.4e-09 65.5 56 53.6
CDE02G3144 Ceratophyllum demersum HOM05D000081 ORTHO05D000036 4.5e-09 65.1 120 36.7
ECA240G1749 Erigeron canadensis HOM05D000081 ORTHO05D007129 1.0e-08 63.9 60 50.0
HanXRQChr09g0244621 Helianthus annuus HOM05D000081 ORTHO05D007129 1.3e-08 63.5 68 47.1
TAR626G0614 Trochodendron aralioides HOM05D060692 ORTHO05D051488 1.1e-07 60.5 57 56.1
Sc06g0009830 Simmondsia chinensis HOM05D000081 ORTHO05D000036 4.2e-07 58.5 84 39.3
Lsat_1_v5_gn_7_49760 Lactuca sativa HOM05D000081 ORTHO05D007129 1.2e-06 57.0 56 51.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (3 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (4 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (4 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (3 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (2 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings