Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02188 Eucalyptus grandis HOM05D005081 ORTHO05D005506 2.7e-130 468.8 258 100.0
GSVIVG01035163001 Vitis vinifera HOM05D005081 ORTHO05D005506 1.0e-55 221.1 251 51.0
PGR044G2548 Punica granatum HOM05D005081 ORTHO05D005506 9.3e-54 214.5 267 50.2
Actinidia29969 Actinidia chinensis HOM05D005081 ORTHO05D005506 1.1e-51 207.6 266 48.1
MSTRG.10457 Avicennia marina HOM05D005081 ORTHO05D005506 3.1e-49 199.5 259 45.9
Solyc05g046310.3 Solanum lycopersicum HOM05D005081 ORTHO05D005506 1.7e-47 193.7 261 46.0
TAR625G0352 Trochodendron aralioides HOM05D005081 ORTHO05D005506 1.7e-47 193.7 249 47.8
Migut.L01903 Erythranthe guttata HOM05D005081 ORTHO05D005506 2.2e-47 193.4 270 45.9
Nitab4.5_0000833g0060 Nicotiana tabacum HOM05D005081 ORTHO05D005506 2.9e-47 193.0 266 47.0
Hma1.2p1_0022F.1_g014783 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 6.5e-47 191.8 263 47.5
PGSC0003DMG400013692 Solanum tuberosum HOM05D005081 ORTHO05D005506 8.4e-47 191.4 262 45.0
Nitab4.5_0010835g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 5.5e-46 188.7 259 45.2
FAN07G0684 Fragaria x ananassa HOM05D005081 ORTHO05D005506 9.3e-46 188.0 255 46.3
FAN12G4058 Fragaria x ananassa HOM05D005081 ORTHO05D005506 9.3e-46 188.0 257 45.9
FvH4_4g06450 Fragaria vesca HOM05D005081 ORTHO05D005506 1.2e-45 187.6 257 45.9
Sopen00g006190 Solanum pennellii HOM05D005081 ORTHO05D005506 3.5e-45 186.0 261 44.1
Manes.15G189400 Manihot esculenta HOM05D005081 ORTHO05D005506 4.6e-45 185.7 252 46.8
TWI32G0620 Tripterygium wilfordii HOM05D005081 ORTHO05D005506 4.6e-45 185.7 263 44.5
Hund26317 Selenicereus undatus HOM05D005081 ORTHO05D005506 1.0e-44 184.5 274 46.0
FAN22G0520 Fragaria x ananassa HOM05D005081 ORTHO05D005506 3.0e-44 183.0 257 45.5
Nitab4.5_0011475g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 3.0e-44 183.0 264 44.3
SGA_v2.0_scaffold63G21842 Striga asiatica HOM05D005081 ORTHO05D005506 8.7e-44 181.4 260 43.1
Cc00_g16170 Coffea canephora HOM05D005081 ORTHO05D005506 1.1e-43 181.0 265 45.3
Rhsim01G0113200 Rhododendron simsii HOM05D005081 ORTHO05D005506 1.5e-43 180.6 254 46.1
Cpa.g.sc115.44 Carica papaya HOM05D005081 ORTHO05D005506 2.5e-43 179.9 251 44.6
FAN17G0390 Fragaria x ananassa HOM05D005081 ORTHO05D005506 7.4e-43 178.3 257 45.5
Oeu008926.1 Olea europaea HOM05D005081 ORTHO05D005506 7.4e-43 178.3 258 42.2
ClCG06G014000 Citrullus lanatus HOM05D005081 ORTHO05D005506 6.3e-42 175.3 262 44.3
Actinidia38513 Actinidia chinensis HOM05D005081 ORTHO05D005506 1.4e-41 174.1 248 44.4
Oeu044689.1 Olea europaea HOM05D005081 ORTHO05D005506 5.3e-41 172.2 262 40.1
Aqoxy7G02679 Aquilegia oxysepala HOM05D005081 ORTHO05D005506 6.9e-41 171.8 251 43.4
vmacro20793 Vaccinium macrocarpon HOM05D005081 ORTHO05D005506 1.2e-40 171.0 271 44.3
Peaxi162Scf00889g00221 Petunia axillaris HOM05D005081 ORTHO05D005506 1.5e-40 170.6 265 41.1
TAR383G1035 Trochodendron aralioides HOM05D005081 ORTHO05D005506 1.5e-40 170.6 260 42.3
MSTRG.26528 Avicennia marina HOM05D005081 ORTHO05D005506 5.0e-39 165.6 261 42.1
AUR62021338 Chenopodium quinoa HOM05D005081 ORTHO05D005506 5.0e-39 165.6 270 44.4
AUR62033253 Chenopodium quinoa HOM05D005081 ORTHO05D005506 6.5e-39 165.2 262 42.4
Haze_19038 Corylus avellana HOM05D001026 ORTHO05D003027 6.5e-39 165.2 255 44.3
MBI16_g18201_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 1.1e-38 164.5 251 43.4
MELO3C017390.2 Cucumis melo HOM05D005081 ORTHO05D005506 1.4e-38 164.1 263 42.6
CiPaw.15G154600 Carya illinoinensis HOM05D005081 ORTHO05D005506 3.2e-38 162.9 258 42.2
Peaxi162Scf00315g00813 Petunia axillaris HOM05D005081 ORTHO05D005506 4.2e-38 162.5 262 41.2
QL11p009451 Quercus lobata HOM05D005081 ORTHO05D005506 4.2e-38 162.5 253 42.3
MD13G1236100 Malus domestica HOM05D005081 ORTHO05D005506 5.5e-38 162.2 238 46.2
CSS0043250 Camellia sinensis var. sinensis HOM05D005081 ORTHO05D005506 9.4e-38 161.4 256 43.0
Nitab4.5_0000053g0180 Nicotiana tabacum HOM05D005081 ORTHO05D005506 9.4e-38 161.4 256 41.0
CsaV3_1G032220 Cucumis sativus L. HOM05D005081 ORTHO05D005506 1.6e-37 160.6 264 42.4
Sabra06G0052800 Salix brachista HOM05D005081 ORTHO05D005506 1.6e-37 160.6 281 42.3
Atru.chr12.2077 Acer truncatum HOM05D005081 ORTHO05D005506 2.7e-37 159.8 259 40.5
Dinv02618 Davidia involucrata HOM05D005081 ORTHO05D005506 2.7e-37 159.8 212 48.6
RcHm_v2.0_Chr4g0398241 Rosa chinensis HOM05D005081 ORTHO05D005506 4.6e-37 159.1 267 41.6
Sed0028150 Sechium edule HOM05D005081 ORTHO05D005506 4.6e-37 159.1 249 41.0
Potri.018G132600 Populus trichocarpa HOM05D005081 ORTHO05D005506 6.1e-37 158.7 275 39.6
SalBow6G6882 Salvia bowleyana HOM05D005081 ORTHO05D005506 6.1e-37 158.7 269 42.0
EL10Ac8g18324 Beta vulgaris HOM05D005081 ORTHO05D005506 1.0e-36 157.9 270 43.3
Hma1.2p1_0022F.1_g014780 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 1.8e-36 157.1 249 43.8
CiPaw.16G103000 Carya illinoinensis HOM05D005081 ORTHO05D005506 5.1e-36 155.6 256 43.0
Potri.006G070900 Populus trichocarpa HOM05D005081 ORTHO05D005506 8.8e-36 154.8 280 42.1
THA.LOC104815319 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 1.1e-35 154.5 260 41.2
THA.LOC104808906 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 3.3e-35 152.9 258 39.9
Actinidia31880 Actinidia chinensis HOM05D005081 ORTHO05D005506 7.4e-35 151.8 241 42.7
Ah.09g230120 Amaranthus hybridus HOM05D005081 ORTHO05D005506 7.4e-35 151.8 279 39.8
Ciclev10012648m.g Citrus clementina HOM05D005081 ORTHO05D005506 3.7e-34 149.4 255 40.8
Prupe.1G067800 Prunus persica HOM05D005081 ORTHO05D005506 8.2e-34 148.3 237 41.4
THA.LOC104826579 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 8.2e-34 148.3 256 41.8
Duzib170G0058 Durio zibethinus HOM05D005081 ORTHO05D005506 1.4e-33 147.5 250 40.4
Lsat_1_v5_gn_7_59220 Lactuca sativa HOM05D005081 ORTHO05D005506 2.4e-33 146.7 261 38.7
PSO170G2950 Papaver somniferum HOM05D005081 ORTHO05D005506 1.2e-32 144.4 268 41.0
Sc08g0004640 Simmondsia chinensis HOM05D005081 ORTHO05D005506 2.6e-32 143.3 263 40.3
PSO063G3463 Papaver somniferum HOM05D005081 ORTHO05D005506 5.9e-32 142.1 276 41.3
Ah.14g083630 Amaranthus hybridus HOM05D005081 ORTHO05D005506 7.7e-32 141.7 261 38.7
Hund09052 Selenicereus undatus HOM05D005081 ORTHO05D005506 7.7e-32 141.7 253 39.1
Thecc.09G189400 Theobroma cacao HOM05D005081 ORTHO05D005506 7.7e-32 141.7 249 39.0
Thhalv10003466m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 2.2e-31 140.2 263 39.5
CANSAT80G2033 Cannabis sativa HOM05D005081 ORTHO05D005506 3.8e-31 139.4 281 34.9
HanXRQChr10g0303491 Helianthus annuus HOM05D005081 ORTHO05D005506 8.5e-31 138.3 248 36.3
AT5G35320 Arabidopsis thaliana HOM05D005081 ORTHO05D005506 7.2e-30 135.2 268 40.7
Sed0020945 Sechium edule HOM05D005081 ORTHO05D005506 7.2e-30 135.2 256 38.7
unitig_899.g15188 Utricularia gibba HOM05D005081 ORTHO05D005506 9.4e-30 134.8 262 37.0
HanXRQChr03g0067191 Helianthus annuus HOM05D005081 ORTHO05D005506 6.1e-29 132.1 251 38.2
Duzib168G1013 Durio zibethinus HOM05D005081 ORTHO05D005506 1.0e-28 131.3 251 37.1
Carub.0007s3114 Capsella rubella HOM05D005081 ORTHO05D005506 1.8e-28 130.6 268 39.2
AL3G43930 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 2.3e-28 130.2 261 39.8
AL7G44130 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 3.0e-28 129.8 261 38.3
Sabra18G0112300 Salix brachista HOM05D005081 ORTHO05D005506 3.0e-28 129.8 260 37.3
MBI13_g31561_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 3.3e-27 126.3 253 35.6
Aa31LG4G14880 Aethionema arabicum HOM05D005081 ORTHO05D005506 5.7e-27 125.6 260 38.8
Gohir.A05G408500 Gossypium hirsutum HOM05D005081 ORTHO05D005506 9.7e-27 124.8 253 37.9
Gohir.D04G006900 Gossypium hirsutum HOM05D005081 ORTHO05D005506 1.3e-26 124.4 253 37.5
Gorai.012G008600 Gossypium raimondii HOM05D005081 ORTHO05D005506 1.3e-26 124.4 253 37.5
ECA240G1118 Erigeron canadensis HOM05D005081 ORTHO05D005506 4.8e-26 122.5 249 38.2
Cc10_g11560 Coffea canephora HOM05D005081 ORTHO05D005506 6.3e-26 122.1 229 39.3
Sp3g25120 Schrenkiella parvula HOM05D005081 ORTHO05D005506 5.3e-25 119.0 285 36.1
ECA234G2314 Erigeron canadensis HOM05D005081 ORTHO05D005506 5.9e-24 115.5 256 35.2
BraA03t13610Z Brassica rapa HOM05D005081 ORTHO05D005506 1.0e-23 114.8 267 37.5
CARHR217350 Cardamine hirsuta HOM05D005081 ORTHO05D005506 1.0e-23 114.8 263 36.5
A03p44750 Brassica napus HOM05D005081 ORTHO05D005506 2.2e-23 113.6 266 36.8
Carub.0003s2733 Capsella rubella HOM05D005081 ORTHO05D005506 1.1e-22 111.3 267 36.3
Os02g0141500 Oryza sativa ssp. japonica HOM05D005081 ORTHO05D005506 1.9e-22 110.5 259 31.7
Lj4g0023825 Lotus japonicus HOM05D005081 ORTHO05D005506 2.5e-22 110.2 262 34.7
CDE02G3184 Ceratophyllum demersum HOM05D005081 ORTHO05D005506 4.2e-22 109.4 251 33.5
Medtr8g101480 Medicago truncatula HOM05D005081 ORTHO05D005506 1.4e-20 104.4 264 33.0
Glyma.08G028300 Glycine max HOM05D005081 ORTHO05D005506 4.0e-20 102.8 270 34.4
Zm00001eb208100 Zea mays HOM05D005081 ORTHO05D005506 6.7e-20 102.1 251 31.9
HPP92_017096 Vanilla planifolia HOM05D005081 ORTHO05D005506 3.3e-19 99.8 248 30.2
HPP92_017106 Vanilla planifolia HOM05D005081 ORTHO05D005506 4.4e-19 99.4 248 30.2
ATR0626G171 Amborella trichopoda HOM05D005081 ORTHO05D005506 7.5e-19 98.6 270 35.9
Phvul.002G303500 Phaseolus vulgaris HOM05D005081 ORTHO05D005506 1.7e-18 97.4 256 33.6
Ca_17410_v3 Cicer arietinum L. HOM05D005081 ORTHO05D005506 2.2e-18 97.1 259 34.7
BcaC01g03146 Brassica carinata HOM05D005081 ORTHO05D005506 2.8e-18 96.7 273 36.6
C03p55600 Brassica napus HOM05D005081 ORTHO05D005506 2.8e-18 96.7 273 36.6
BolC3t17837H Brassica oleracea HOM05D005081 ORTHO05D005506 2.8e-18 96.7 273 36.6
Glyma.05G221800 Glycine max HOM05D005081 ORTHO05D005506 8.2e-18 95.1 278 30.9
CARHR103910 Cardamine hirsuta HOM05D005081 ORTHO05D005506 1.4e-17 94.4 249 33.3
Peaxi162Scf00083g00112 Petunia axillaris HOM05D005081 ORTHO05D005506 4.1e-17 92.8 128 38.3
arahy.Tifrunner.gnm1.ann1.TAK2NC Arachis hypogaea HOM05D005081 ORTHO05D005506 9.1e-17 91.7 269 31.6
DCAR_019825 Daucus carota HOM05D005081 ORTHO05D005506 9.1e-17 91.7 271 32.1
Lalb_Chr05g0223691 Lupinus albus HOM05D005081 ORTHO05D005506 9.1e-17 91.7 264 33.0
MD15G1102900 Malus domestica HOM05D005081 ORTHO05D005506 1.6e-16 90.9 247 30.8
Peaxi162Scf00460g00005 Petunia axillaris HOM05D005081 ORTHO05D005506 1.6e-16 90.9 126 38.9
Peaxi162Scf00566g00025 Petunia axillaris HOM05D005081 ORTHO05D005506 1.6e-16 90.9 124 40.3
TPR.G25464 Trifolium pratense HOM05D005081 ORTHO05D005506 1.6e-16 90.9 266 31.2
VMungo0251G2709 Vigna mungo HOM05D005081 ORTHO05D005506 2.0e-16 90.5 264 35.6
BcaB08g34509 Brassica carinata HOM05D005081 ORTHO05D005506 7.7e-16 88.6 276 31.2
Duzib168G0721 Durio zibethinus HOM05D005081 ORTHO05D005506 1.7e-15 87.4 255 29.4
Peaxi162Scf01260g00001 Petunia axillaris HOM05D005081 ORTHO05D005506 2.9e-15 86.7 123 37.4
Prupe.1G455900 Prunus persica HOM05D005081 ORTHO05D005506 2.9e-15 86.7 248 32.7
Thecc.09G002900 Theobroma cacao HOM05D005081 ORTHO05D005506 5.0e-15 85.9 260 26.9
arahy.Tifrunner.gnm1.ann1.FV9V0P Arachis hypogaea HOM05D005081 ORTHO05D005506 2.5e-14 83.6 269 30.5
Peaxi162Scf00740g00003 Petunia axillaris HOM05D005081 ORTHO05D005506 2.5e-14 83.6 107 43.9
MD16G1241100 Malus domestica HOM05D005081 ORTHO05D005506 4.2e-14 82.8 137 40.9
Peaxi162Scf00228g00099 Petunia axillaris HOM05D005081 ORTHO05D005506 5.5e-14 82.4 126 36.5
Psat7g022000 Pisum sativum HOM05D005081 ORTHO05D005506 1.2e-13 81.3 164 37.8
MD08G1124200 Malus domestica HOM05D005081 ORTHO05D005506 5.2e-12 75.9 249 28.5
Peaxi162Scf00020g00002 Petunia axillaris HOM05D005081 ORTHO05D005506 1.5e-11 74.3 92 43.5
RcHm_v2.0_Chr6g0305451 Rosa chinensis HOM05D005081 ORTHO05D005506 5.7e-11 72.4 156 29.5
FvH4_2g36450 Fragaria vesca HOM05D026897 ORTHO05D005506 9.8e-11 71.6 292 25.7
FAN20G0355 Fragaria x ananassa HOM05D026897 ORTHO05D005506 1.1e-09 68.2 158 29.1
FAN27G3206 Fragaria x ananassa HOM05D026897 ORTHO05D005506 1.4e-09 67.8 292 25.0
QL12p025899 Quercus lobata HOM05D005081 ORTHO05D005506 3.1e-09 66.6 248 29.4
Peaxi162Scf00543g00012 Petunia axillaris HOM05D005081 ORTHO05D005506 1.2e-08 64.7 89 42.7
FAN15G2850 Fragaria x ananassa HOM05D026897 ORTHO05D005506 2.7e-08 63.5 282 25.5
Peaxi162Scf00451g00717 Petunia axillaris HOM05D005081 ORTHO05D005506 4.5e-08 62.8 91 41.8
Atru.chr7.2685 Acer truncatum HOM05D005081 ORTHO05D005506 1.3e-07 61.2 151 33.1
Lalb_Chr11g0064261 Lupinus albus HOM05D005081 ORTHO05D005506 1.7e-07 60.8 249 26.9
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 2.5e-06 57.0 166 31.3
Glyma.04G077700 Glycine max HOM05D027503 ORTHO05D005506 9.4e-06 55.1 101 33.7

Acer truncatum (2 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (7 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (4 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (11 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings