Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Eucgr.C01632	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	2.7e-76	288.5	138	100.0
Eucgr.C01699	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	9.7e-74	280.0	138	96.4
Eucgr.C01639	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	1.7e-70	269.2	140	93.6
Eucgr.C01687	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	4.2e-69	264.6	138	93.5
Eucgr.C01695	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	2.2e-57	225.7	139	84.2
Eucgr.C01701	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	6.1e-52	207.6	134	82.8
Eucgr.C01690	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	1.4e-51	206.5	108	91.7
Eucgr.C01694	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	2.6e-47	192.2	129	80.6
Eucgr.C01698	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	1.6e-44	183.0	126	77.0
Eucgr.L03259	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	6.1e-36	154.5	93	83.9
Eucgr.C01640	Eucalyptus grandis	HOM05D003969	ORTHO05D003125	5.7e-34	147.9	90	83.3
TAR383G0074	Trochodendron aralioides	HOM05D003969	ORTHO05D003125	5.6e-13	78.2	129	41.1
TAR625G0404	Trochodendron aralioides	HOM05D003969	ORTHO05D003125	1.6e-12	76.6	139	37.4
MELO3C016989.2	Cucumis melo	HOM05D003969	ORTHO05D003125	2.1e-12	76.3	119	43.7
ClCG05G016610	Citrullus lanatus	HOM05D003969	ORTHO05D003125	2.8e-12	75.9	128	44.5
Nn2g12243	Nelumbo nucifera	HOM05D003969	ORTHO05D003125	4.7e-12	75.1	137	39.4
TAR636G2249	Trochodendron aralioides	HOM05D003969	ORTHO05D003125	4.7e-12	75.1	143	35.7
Sed0009487	Sechium edule	HOM05D003969	ORTHO05D003125	1.8e-11	73.2	119	39.5
Nn8g39714	Nelumbo nucifera	HOM05D003969	ORTHO05D003125	5.2e-11	71.6	142	37.3
PGR031G2169	Punica granatum	HOM05D003969	ORTHO05D003125	5.2e-11	71.6	127	45.7
CiPaw.07G226900	Carya illinoinensis	HOM05D003969	ORTHO05D003125	1.5e-10	70.1	104	45.2
Lsat_1_v5_gn_8_63081	Lactuca sativa	HOM05D003969	ORTHO05D003125	1.5e-10	70.1	122	35.2
TAR626G0029	Trochodendron aralioides	HOM05D003969	ORTHO05D003125	1.5e-10	70.1	129	38.8
Nitab4.5_0002992g0060	Nicotiana tabacum	HOM05D003969	ORTHO05D003125	2.0e-10	69.7	77	50.6
CsaV3_4G036890	Cucumis sativus L.	HOM05D003969	ORTHO05D003125	3.4e-10	68.9	119	42.0
Cfa013102	Carpinus fangiana	HOM05D003969	ORTHO05D003125	4.4e-10	68.6	103	43.7
Sc23g0006570	Simmondsia chinensis	HOM05D003969	ORTHO05D003125	4.4e-10	68.6	81	49.4
Migut.A00008	Erythranthe guttata	HOM05D003969	ORTHO05D003125	5.8e-10	68.2	69	50.7
COL.COLO4_18912	Corchorus olitorius	HOM05D003969	ORTHO05D003125	7.5e-10	67.8	81	51.9
Dinv15887	Davidia involucrata	HOM05D003969	ORTHO05D003125	1.7e-09	66.6	108	41.7
PGSC0003DMG400029901	Solanum tuberosum	HOM05D003969	ORTHO05D003125	1.7e-09	66.6	68	52.9
Actinidia04245	Actinidia chinensis	HOM05D003969	ORTHO05D003125	2.2e-09	66.2	107	43.0
HanXRQChr05g0141561	Helianthus annuus	HOM05D003969	ORTHO05D003125	2.2e-09	66.2	69	47.8
RcHm_v2.0_Chr2g0086701	Rosa chinensis	HOM05D003969	ORTHO05D003125	2.2e-09	66.2	111	36.9
MBI14_g03633_MAGBIO	Magnolia biondii	HOM05D003969	ORTHO05D003125	2.9e-09	65.9	121	38.0
Sc23g0006560	Simmondsia chinensis	HOM05D003969	ORTHO05D003125	2.9e-09	65.9	80	51.2
Haze_21463	Corylus avellana	HOM05D008824	ORTHO05D003125	3.7e-09	65.5	124	41.1
Dinv41425	Davidia involucrata	HOM05D003969	ORTHO05D003125	4.9e-09	65.1	122	38.5
Hma1.2p1_0228F.1_g096590	Hydrangea macrophylla	HOM05D003969	ORTHO05D003125	6.4e-09	64.7	113	42.5
Peaxi162Scf00116g00085	Petunia axillaris	HOM05D003969	ORTHO05D003125	6.4e-09	64.7	125	39.2
Nitab4.5_0010572g0020	Nicotiana tabacum	HOM05D003969	ORTHO05D003125	8.3e-09	64.3	68	51.5
ClCG08G013530	Citrullus lanatus	HOM05D008824	ORTHO05D003125	1.1e-08	63.9	130	40.8
Sed0014973	Sechium edule	HOM05D003969	ORTHO05D003125	1.1e-08	63.9	119	38.7
Lalb_Chr22g0361461	Lupinus albus	HOM05D013068	ORTHO05D003125	1.4e-08	63.5	92	45.7
Prupe.7G255000	Prunus persica	HOM05D003969	ORTHO05D003125	1.4e-08	63.5	87	41.4
AUR62041449	Chenopodium quinoa	HOM05D003969	ORTHO05D003125	2.4e-08	62.8	85	41.2
Glyma.17G215400	Glycine max	HOM05D013068	ORTHO05D003125	2.4e-08	62.8	81	46.9
Hma1.2p1_1784F.1_g302146	Hydrangea macrophylla	HOM05D003969	ORTHO05D003125	2.4e-08	62.8	122	37.7
Hma1.2p1_1784F.1_g302150	Hydrangea macrophylla	HOM05D003969	ORTHO05D003125	2.4e-08	62.8	122	37.7
Actinidia21911	Actinidia chinensis	HOM05D003969	ORTHO05D003125	3.2e-08	62.4	125	37.6
AUR62011257	Chenopodium quinoa	HOM05D003969	ORTHO05D003125	3.2e-08	62.4	104	36.5
Gohir.A05G056900	Gossypium hirsutum	HOM05D003969	ORTHO05D003125	3.2e-08	62.4	93	38.7
SalBow1G8303	Salvia bowleyana	HOM05D003969	ORTHO05D003125	3.2e-08	62.4	125	37.6
THA.LOC104815009	Tarenaya hassleriana	HOM05D008824	ORTHO05D003125	3.2e-08	62.4	80	48.8
Glyma.14G112500	Glycine max	HOM05D003969	ORTHO05D003125	4.1e-08	62.0	73	50.7
Gohir.D05G059000	Gossypium hirsutum	HOM05D003969	ORTHO05D003125	4.1e-08	62.0	93	37.6
Sopen08g011970	Solanum pennellii	HOM05D003969	ORTHO05D003125	4.1e-08	62.0	68	50.0
Cpa.g.sc187.25	Carica papaya	HOM05D008824	ORTHO05D003125	5.4e-08	61.6	77	49.4
Gorai.009G060100	Gossypium raimondii	HOM05D003969	ORTHO05D003125	5.4e-08	61.6	93	37.6
Hma1.2p1_0182F.1_g080470	Hydrangea macrophylla	HOM05D003969	ORTHO05D003125	5.4e-08	61.6	145	35.2
Hma1.2p1_2744F.1_g327795	Hydrangea macrophylla	HOM05D003969	ORTHO05D003125	5.4e-08	61.6	145	35.2
Lj5g0018030	Lotus japonicus	HOM05D013068	ORTHO05D003125	5.4e-08	61.6	82	46.3
HPP92_005341	Vanilla planifolia	HOM05D003969	ORTHO05D003125	5.4e-08	61.6	119	36.1
ECA236G4020	Erigeron canadensis	HOM05D003969	ORTHO05D003125	1.2e-07	60.5	69	43.5
EL10Ac8g18819	Beta vulgaris	HOM05D003969	ORTHO05D003125	2.1e-07	59.7	66	45.5
BcaNung01909	Brassica carinata	HOM05D008824	ORTHO05D003125	2.1e-07	59.7	112	40.2
BcaNung01911	Brassica carinata	HOM05D008824	ORTHO05D003125	2.1e-07	59.7	112	40.2
ClCG02G017250	Citrullus lanatus	HOM05D003969	ORTHO05D003125	2.1e-07	59.7	112	39.3
Thhalv10016092m.g	Eutrema salsugineum	HOM05D008824	ORTHO05D003125	2.1e-07	59.7	132	37.9
Rhsim03G0254600	Rhododendron simsii	HOM05D000320	ORTHO05D000532	2.1e-07	59.7	124	37.9
Solyc08g041810.1	Solanum lycopersicum	HOM05D003969	ORTHO05D003125	2.1e-07	59.7	68	48.5
CSS0007982	Camellia sinensis var. sinensis	HOM05D003969	ORTHO05D003125	2.7e-07	59.3	68	47.1
CSS0019227	Camellia sinensis var. sinensis	HOM05D003969	ORTHO05D003125	2.7e-07	59.3	113	37.2
CSS0049905	Camellia sinensis var. sinensis	HOM05D003969	ORTHO05D003125	2.7e-07	59.3	113	37.2
Carub.0006s0958	Capsella rubella	HOM05D008824	ORTHO05D003125	3.5e-07	58.9	94	43.6
CDE02G3523	Ceratophyllum demersum	HOM05D000894	ORTHO05D001833	3.5e-07	58.9	140	36.4
Manes.16G125900	Manihot esculenta	HOM05D008824	ORTHO05D003125	3.5e-07	58.9	77	48.1
QL02p020337	Quercus lobata	HOM05D008824	ORTHO05D003125	3.5e-07	58.9	78	47.4
Dinv11721	Davidia involucrata	HOM05D003969	ORTHO05D003125	4.6e-07	58.5	92	40.2
Medtr4g116500	Medicago truncatula	HOM05D003969	ORTHO05D003125	4.6e-07	58.5	117	36.8
Nitab4.5_0000069g0040	Nicotiana tabacum	HOM05D003969	ORTHO05D003125	4.6e-07	58.5	81	38.3
Thecc.09G019700	Theobroma cacao	HOM05D003969	ORTHO05D003125	4.6e-07	58.5	66	48.5
Thecc.09G141500	Theobroma cacao	HOM05D003969	ORTHO05D003125	4.6e-07	58.5	84	42.9
TWI34G1911	Tripterygium wilfordii	HOM05D003969	ORTHO05D003125	4.6e-07	58.5	86	39.5
Gohir.D07G034000	Gossypium hirsutum	HOM05D003969	ORTHO05D003125	6.0e-07	58.2	84	46.4
Gorai.001G035600	Gossypium raimondii	HOM05D003969	ORTHO05D003125	6.0e-07	58.2	84	46.4
Lj4g0023658	Lotus japonicus	HOM05D003969	ORTHO05D003125	6.0e-07	58.2	117	39.3
Oeu057292.1	Olea europaea	HOM05D003969	ORTHO05D003125	6.0e-07	58.2	118	38.1
Potri.006G259200	Populus trichocarpa	HOM05D008824	ORTHO05D003125	6.0e-07	58.2	81	45.7
TPR.G38870	Trifolium pratense	HOM05D013068	ORTHO05D003125	6.0e-07	58.2	69	44.9
VMungo0647G1373	Vigna mungo	HOM05D013068	ORTHO05D003125	6.0e-07	58.2	68	51.5
ATR0629G091	Amborella trichopoda	HOM05D003969	ORTHO05D003125	7.8e-07	57.8	111	37.8
COL.COLO4_24105	Corchorus olitorius	HOM05D003969	ORTHO05D003125	7.8e-07	57.8	89	38.2
FAN19G0689	Fragaria x ananassa	HOM05D003969	ORTHO05D003125	7.8e-07	57.8	107	36.4
Zm00001eb275140	Zea mays	HOM05D021431	ORTHO05D003125	7.8e-07	57.8	59	50.8
Haze_19321	Corylus avellana	HOM05D003969	ORTHO05D003125	1.0e-06	57.4	80	41.2
Gohir.A07G030200	Gossypium hirsutum	HOM05D003969	ORTHO05D003125	1.0e-06	57.4	73	47.9
AT5G11070	Arabidopsis thaliana	HOM05D008824	ORTHO05D003125	1.3e-06	57.0	114	37.7
BcaB01g06316	Brassica carinata	HOM05D008824	ORTHO05D003125	1.3e-06	57.0	90	42.2
Cc06_g07430	Coffea canephora	HOM05D003969	ORTHO05D003125	1.3e-06	57.0	143	32.9
AL6G21690	Arabidopsis lyrata	HOM05D008824	ORTHO05D003125	1.7e-06	56.6	90	42.2
A03p04850	Brassica napus	HOM05D008824	ORTHO05D003125	1.7e-06	56.6	89	42.7
BraA03t09824Z	Brassica rapa	HOM05D008824	ORTHO05D003125	1.7e-06	56.6	89	42.7
BraA10t44721Z	Brassica rapa	HOM05D008824	ORTHO05D003125	1.7e-06	56.6	90	44.4
Gohir.A13G203200	Gossypium hirsutum	HOM05D003969	ORTHO05D003125	1.7e-06	56.6	87	42.5
Gorai.013G237600	Gossypium raimondii	HOM05D003969	ORTHO05D003125	1.7e-06	56.6	87	42.5
Ah.16g104800	Amaranthus hybridus	HOM05D003969	ORTHO05D003125	2.3e-06	56.2	70	44.3
A10p26630	Brassica napus	HOM05D008824	ORTHO05D003125	2.3e-06	56.2	91	44.0
C09p65790	Brassica napus	HOM05D008824	ORTHO05D003125	2.3e-06	56.2	91	44.0
Duzib150G0809	Durio zibethinus	HOM05D003969	ORTHO05D003125	2.3e-06	56.2	101	38.6
Phvul.001G047400	Phaseolus vulgaris	HOM05D013068	ORTHO05D003125	2.3e-06	56.2	68	50.0
THA.LOC104814116	Tarenaya hassleriana	HOM05D008824	ORTHO05D003125	2.3e-06	56.2	78	46.2
Aa31LG3G16070	Aethionema arabicum	HOM05D008824	ORTHO05D003125	3.0e-06	55.8	92	43.5
BcaB01g05491	Brassica carinata	HOM05D008824	ORTHO05D003125	3.0e-06	55.8	90	41.1
BcaC04g19263	Brassica carinata	HOM05D008824	ORTHO05D003125	3.0e-06	55.8	91	44.0
BolC3t13066H	Brassica oleracea	HOM05D008824	ORTHO05D003125	3.0e-06	55.8	90	41.1
BolC9t59401H	Brassica oleracea	HOM05D008824	ORTHO05D003125	3.0e-06	55.8	91	44.0
FAN28G0460	Fragaria x ananassa	HOM05D003969	ORTHO05D003125	3.0e-06	55.8	124	34.7
Glyma.13G157500	Glycine max	HOM05D003969	ORTHO05D003125	3.0e-06	55.8	88	38.6
Gohir.D13G208500	Gossypium hirsutum	HOM05D003969	ORTHO05D003125	3.0e-06	55.8	92	42.4
Oeu010893.1	Olea europaea	HOM05D003969	ORTHO05D003125	3.0e-06	55.8	97	37.1
Sopen01g007400	Solanum pennellii	HOM05D003969	ORTHO05D003125	3.0e-06	55.8	70	42.9
PGSC0003DMG400005307	Solanum tuberosum	HOM05D003969	ORTHO05D003125	3.0e-06	55.8	128	32.8
Aa31sc598G40	Aethionema arabicum	HOM05D003969	ORTHO05D003125	3.9e-06	55.5	80	41.2
Duzib168G2018	Durio zibethinus	HOM05D003969	ORTHO05D003125	3.9e-06	55.5	96	37.5
Migut.K00379	Erythranthe guttata	HOM05D003969	ORTHO05D003125	3.9e-06	55.5	69	46.4
Solyc01g011390.2	Solanum lycopersicum	HOM05D003969	ORTHO05D003125	3.9e-06	55.5	70	42.9
ATR0763G001	Amborella trichopoda	HOM05D003969	ORTHO05D003125	5.1e-06	55.1	88	37.5
EL10Ac2g04157	Beta vulgaris	HOM05D003969	ORTHO05D003125	5.1e-06	55.1	70	48.6
BcaB04g18063	Brassica carinata	HOM05D003969	ORTHO05D003125	5.1e-06	55.1	131	32.1
CANSAT01G2013	Cannabis sativa	HOM05D008824	ORTHO05D003125	5.1e-06	55.1	78	44.9
FAN26G0199	Fragaria x ananassa	HOM05D003969	ORTHO05D003125	5.1e-06	55.1	124	33.1
PSO675G3576	Papaver somniferum	HOM05D003969	ORTHO05D003125	5.1e-06	55.1	80	37.5
PSO732G0403	Papaver somniferum	HOM05D003969	ORTHO05D003125	5.1e-06	55.1	80	37.5
THA.LOC104815394	Tarenaya hassleriana	HOM05D003969	ORTHO05D003125	5.1e-06	55.1	123	33.3
BcaNung07098	Brassica carinata	HOM05D008824	ORTHO05D003125	6.6e-06	54.7	93	41.9
CARHR202220	Cardamine hirsuta	HOM05D008824	ORTHO05D003125	6.6e-06	54.7	94	41.5
Sed0021780	Sechium edule	HOM05D003969	ORTHO05D003125	6.6e-06	54.7	110	34.5
Solyc12g010430.1	Solanum lycopersicum	HOM05D003969	ORTHO05D003125	6.6e-06	54.7	41	63.4
Sopen12g005450	Solanum pennellii	HOM05D003969	ORTHO05D003125	6.6e-06	54.7	41	63.4
Cc08_g00220	Coffea canephora	HOM05D003969	ORTHO05D003125	8.6e-06	54.3	127	33.9
MELO3C004442.2	Cucumis melo	HOM05D003969	ORTHO05D003125	8.6e-06	54.3	110	36.4
Lalb_Chr12g0198511	Lupinus albus	HOM05D003969	ORTHO05D003125	8.6e-06	54.3	87	37.9
Manes.03G012100	Manihot esculenta	HOM05D003969	ORTHO05D003125	8.6e-06	54.3	118	38.1
Psat4g033280	Pisum sativum	HOM05D003969	ORTHO05D003125	8.6e-06	54.3	117	37.6
Sc08g0005750	Simmondsia chinensis	HOM05D003969	ORTHO05D003125	8.6e-06	54.3	148	32.4
vmacro12402	Vaccinium macrocarpon	HOM05D006851	ORTHO05D008844	8.6e-06	54.3	72	48.6
HPP92_006060	Vanilla planifolia	HOM05D003969	ORTHO05D003125	8.6e-06	54.3	110	39.1
HPP92_020075	Vanilla planifolia	HOM05D003969	ORTHO05D003125	8.6e-06	54.3	93	38.7

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

Contact Settings

Data Settings

Program Settings

About us

Support

Legal

Other