Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 1.9e-62 242.3 116 100.0
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 9.6e-59 229.9 112 97.3
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 4.8e-58 227.6 112 96.4
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 9.0e-57 223.4 112 94.6
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 4.8e-50 201.1 112 83.0
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 8.2e-50 200.3 113 85.0
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 1.4e-49 199.5 113 84.1
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 1.4e-49 199.5 113 81.4
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.4e-49 199.5 113 81.4
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 1.8e-49 199.1 113 83.2
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 1.8e-49 199.1 113 81.4
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 2.4e-49 198.7 112 81.2
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 4.1e-49 198.0 111 80.2
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 9.0e-49 196.8 112 79.5
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 4.5e-48 194.5 112 81.2
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 7.7e-48 193.7 112 79.5
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 7.7e-48 193.7 113 81.4
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 1.0e-47 193.4 113 80.5
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.3e-47 193.0 111 82.0
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.3e-47 193.0 111 82.0
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 1.3e-47 193.0 111 82.0
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 5.0e-47 191.0 113 77.9
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 8.5e-47 190.3 113 77.9
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 8.5e-47 190.3 113 77.9
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 8.5e-47 190.3 108 80.6
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 8.5e-47 190.3 113 77.0
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 1.4e-46 189.5 113 78.8
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 2.5e-46 188.7 114 78.1
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 4.2e-46 188.0 108 81.5
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 9.4e-46 186.8 113 77.0
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 9.4e-46 186.8 113 77.0
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 9.4e-46 186.8 113 78.8
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 1.2e-45 186.4 109 78.0
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 1.2e-45 186.4 112 74.1
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 1.6e-45 186.0 112 75.9
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 1.6e-45 186.0 113 76.1
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 2.1e-45 185.7 108 78.7
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 2.1e-45 185.7 113 79.6
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 2.1e-45 185.7 113 79.6
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 3.6e-45 184.9 112 75.0
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 3.6e-45 184.9 112 75.9
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 7.9e-45 183.7 114 75.4
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 7.9e-45 183.7 113 77.9
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 1.4e-44 183.0 108 75.0
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 1.4e-44 183.0 118 73.7
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 1.8e-44 182.6 109 79.8
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 1.8e-44 182.6 112 74.1
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 1.8e-44 182.6 113 73.5
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 2.3e-44 182.2 111 75.7
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 2.3e-44 182.2 108 76.9
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 3.0e-44 181.8 113 74.3
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 3.0e-44 181.8 118 72.9
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 3.0e-44 181.8 113 76.1
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 3.0e-44 181.8 107 77.6
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 3.0e-44 181.8 107 77.6
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 3.0e-44 181.8 113 70.8
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 3.9e-44 181.4 112 71.4
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 5.1e-44 181.0 108 75.9
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 6.7e-44 180.6 114 73.7
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 6.7e-44 180.6 107 77.6
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 8.8e-44 180.3 113 77.0
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 8.8e-44 180.3 111 76.6
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 2.0e-43 179.1 117 71.8
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 2.5e-43 178.7 112 71.4
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 4.3e-43 177.9 109 74.3
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 5.7e-43 177.6 113 76.1
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 9.7e-43 176.8 105 79.0
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 1.7e-42 176.0 110 70.0
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 2.8e-42 175.3 109 74.3
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 3.7e-42 174.9 108 72.2
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 4.8e-42 174.5 112 73.2
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 6.3e-42 174.1 108 71.3
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 8.2e-42 173.7 105 76.2
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 8.2e-42 173.7 116 69.8
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.1e-41 173.3 106 72.6
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 1.1e-41 173.3 105 76.2
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 1.1e-41 173.3 112 72.3
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 2.4e-41 172.2 114 68.4
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 2.4e-41 172.2 118 68.6
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 2.4e-41 172.2 112 72.3
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 5.3e-41 171.0 112 68.8
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 5.3e-41 171.0 116 69.8
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 9.1e-41 170.2 109 73.4
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 9.1e-41 170.2 108 68.5
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 1.2e-40 169.9 110 65.5
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 1.5e-40 169.5 108 74.1
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 2.0e-40 169.1 111 72.1
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 3.4e-40 168.3 106 73.6
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 3.4e-40 168.3 107 73.8
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 4.5e-40 167.9 95 82.1
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 7.7e-40 167.2 107 72.0
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.0e-39 166.8 112 70.5
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 1.3e-39 166.4 132 61.4
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 2.2e-39 165.6 105 75.2
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 3.8e-39 164.9 98 75.5
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 3.8e-39 164.9 94 80.9
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 6.5e-39 164.1 93 81.7
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 8.5e-39 163.7 110 71.8
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 3.2e-38 161.8 97 75.3
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 7.2e-38 160.6 108 67.6
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.2e-37 159.8 112 67.0
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 6.1e-37 157.5 113 67.3
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 1.4e-36 156.4 110 69.1
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 3.0e-36 155.2 94 72.3
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 3.9e-36 154.8 108 64.8
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.1e-35 153.3 110 69.1
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 1.5e-35 152.9 99 70.7
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 2.6e-35 152.1 110 67.3
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 3.3e-35 151.8 110 68.2
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 3.3e-35 151.8 110 68.2
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 3.3e-35 151.8 110 68.2
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 3.3e-35 151.8 110 67.3
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 7.4e-35 150.6 95 73.7
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 1.7e-34 149.4 94 73.4
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 1.7e-34 149.4 94 73.4
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 2.8e-34 148.7 110 66.4
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 8.2e-34 147.1 110 66.4
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 8.2e-34 147.1 110 66.4
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 1.4e-33 146.4 110 65.5
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 1.4e-33 146.4 110 65.5
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 9.1e-33 143.7 110 64.5
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 4.2e-30 134.8 85 71.8
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 2.1e-29 132.5 98 66.3
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 8.0e-29 130.6 110 58.2
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 1.8e-28 129.4 108 62.0
Sopen03g039470 Solanum pennellii HOM05D005761 ORTHO05D007286 2.8e-26 122.1 72 75.0
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 3.1e-25 118.6 86 57.0
HanXRQChr11g0333491 Helianthus annuus HOM05D005761 ORTHO05D007286 1.8e-20 102.8 124 42.7
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 5.7e-19 97.8 108 46.3
HanXRQChr08g0232791 Helianthus annuus HOM05D005761 ORTHO05D007286 1.1e-17 93.6 124 39.5
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 4.5e-16 88.2 95 42.1
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 5.5e-14 81.3 95 44.2
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 1.6e-13 79.7 57 64.9
Rhsim08G0203300 Rhododendron simsii HOM05D005761 ORTHO05D007286 2.7e-13 79.0 52 69.2
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 1.3e-10 70.1 46 65.2
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 4.5e-08 61.6 39 69.2

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (3 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (5 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (3 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings