Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.3e-174 616.3 309 100.0
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.9e-108 394.4 337 70.6
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 2.4e-104 382.9 314 70.1
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 9.3e-101 370.9 327 66.4
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 9.3e-101 370.9 328 67.4
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.6e-100 370.2 334 65.9
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.7e-100 369.4 332 66.6
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 4.6e-100 368.6 329 65.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 6.0e-100 368.2 332 66.3
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.8e-99 366.7 332 66.3
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.0e-99 365.9 332 66.0
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 6.7e-99 364.8 329 64.4
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 6.7e-99 364.8 338 64.2
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 6.7e-99 364.8 334 63.8
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.1e-98 364.0 328 63.4
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.5e-98 363.6 334 63.5
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.5e-98 363.6 335 64.2
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.5e-98 363.6 329 65.0
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 2.5e-98 362.8 332 65.1
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.3e-98 362.5 329 64.1
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 4.3e-98 362.1 336 63.1
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 5.7e-98 361.7 332 63.9
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 7.4e-98 361.3 332 64.5
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 7.4e-98 361.3 336 62.8
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.3e-97 360.5 328 62.8
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.6e-97 360.1 330 63.6
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 1.6e-97 360.1 331 62.5
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.1e-97 359.8 329 63.8
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 3.7e-97 359.0 334 63.5
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 8.2e-97 357.8 329 62.9
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 8.2e-97 357.8 332 63.3
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.1e-96 357.5 358 59.5
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.8e-96 356.7 329 62.6
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 2.4e-96 356.3 332 63.0
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 3.1e-96 355.9 331 64.4
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 3.1e-96 355.9 332 63.0
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 4.1e-96 355.5 331 63.4
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.5e-95 353.6 339 62.5
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.5e-95 353.6 331 62.2
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.6e-95 352.8 328 61.3
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 2.6e-95 352.8 328 64.0
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 4.5e-95 352.1 333 63.4
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.5e-95 352.1 334 62.0
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.5e-95 352.1 334 62.0
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.0e-94 350.9 331 62.5
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.0e-94 350.9 334 61.7
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.0e-94 350.9 337 62.6
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.0e-94 350.9 334 61.7
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.7e-94 350.1 332 63.3
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.7e-94 350.1 332 63.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.2e-94 349.7 333 62.2
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.2e-94 349.7 338 62.4
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.9e-94 349.4 336 62.2
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.9e-94 349.4 334 61.7
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.8e-94 349.0 306 66.7
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 3.8e-94 349.0 328 61.0
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.8e-94 349.0 325 64.0
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 6.5e-94 348.2 338 62.1
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 8.4e-94 347.8 327 60.9
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.4e-93 347.1 336 62.2
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.5e-93 346.3 338 61.8
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 2.5e-93 346.3 327 62.1
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.2e-93 345.9 329 60.8
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 5.5e-93 345.1 336 61.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 7.2e-93 344.7 327 61.2
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 9.3e-93 344.4 328 61.6
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-92 344.0 337 61.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 1.2e-92 344.0 335 62.7
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 1.6e-92 343.6 329 60.2
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 1.6e-92 343.6 329 60.2
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 1.6e-92 343.6 329 60.2
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 1.6e-92 343.6 329 60.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.6e-92 343.6 458 50.9
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 3.5e-92 342.4 189 92.6
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 4.6e-92 342.0 190 94.2
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 7.9e-92 341.3 330 60.3
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 7.9e-92 341.3 339 60.8
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.0e-91 340.9 329 59.9
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.0e-91 340.9 338 60.4
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.0e-91 340.9 336 61.0
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.0e-91 340.9 336 61.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.0e-91 340.9 329 59.9
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 3.0e-91 339.3 336 59.5
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.7e-91 338.2 338 60.4
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 8.7e-91 337.8 338 60.7
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.1e-90 337.4 329 59.6
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.5e-90 337.0 392 54.6
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 2.5e-90 336.3 190 92.1
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.3e-90 335.9 338 59.8
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 4.3e-90 335.5 338 60.1
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 5.7e-90 335.1 329 59.0
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 9.7e-90 334.3 329 59.0
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.3e-89 334.0 329 59.0
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 3.7e-89 332.4 332 59.6
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.7e-89 332.4 312 64.1
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 4.8e-89 332.0 336 58.6
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 6.3e-89 331.6 336 58.6
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 5.3e-88 328.6 370 56.5
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 5.3e-88 328.6 332 60.5
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.3e-86 323.9 321 59.8
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 3.8e-86 322.4 333 57.1
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.4e-85 320.5 327 60.2
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.9e-85 320.1 331 58.6
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.0e-83 312.8 317 60.3
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.1e-82 310.8 327 57.2
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 5.7e-82 308.5 332 54.8
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 3.7e-81 305.8 331 53.8
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.8e-80 303.5 334 54.8
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 2.4e-80 303.1 304 60.5
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.5e-79 300.4 337 56.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.5e-79 300.4 302 60.3
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 5.9e-79 298.5 328 53.7
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 7.9e-76 288.1 334 54.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.7e-75 285.0 384 50.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 8.2e-73 278.1 167 86.2
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.1e-72 277.7 306 57.8
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.4e-72 277.3 167 87.4
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 4.1e-72 275.8 167 88.6
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.0e-70 268.9 167 84.4
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 6.5e-70 268.5 329 53.5
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 9.1e-64 248.1 279 53.8
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.2e-60 237.7 332 43.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.1e-60 236.9 323 43.0
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 6.1e-60 235.3 335 46.6
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 3.4e-50 203.0 321 45.5
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.8e-48 197.2 305 44.3
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 5.9e-47 192.2 101 93.1
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 5.6e-45 185.7 311 41.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 4.0e-43 179.5 272 45.2
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 4.1e-40 169.5 229 48.0
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 7.0e-40 168.7 180 54.4
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 7.8e-39 165.2 97 85.6
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.9e-37 160.6 234 44.4
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 2.5e-37 160.2 169 49.7
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-30 137.9 88 77.3
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.8e-27 127.5 67 98.5
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 2.0e-26 124.0 74 82.4
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 4.1e-24 116.3 69 85.5
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.6e-23 114.4 65 90.8
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 6.0e-23 112.5 64 87.5
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.0e-22 111.7 65 92.3
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.6e-22 109.0 65 83.1
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.5e-21 107.8 65 83.1
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 5.6e-21 105.9 65 84.6
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 9.5e-21 105.1 82 70.7
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 4.7e-20 102.8 67 76.1
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 8.1e-20 102.1 65 81.5
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 8.4e-17 92.0 65 76.9
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.4e-16 90.5 51 90.2
TAR633G0902 Trochodendron aralioides HOM05D004483 ORTHO05D414844 1.2e-15 88.2 46 73.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (6 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings