Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g04900 Coffea canephora HOM05D001568 ORTHO05D004404 6.4e-29 130.2 71 100.0
SalBow1G1780 Salvia bowleyana HOM05D001568 ORTHO05D004404 6.2e-16 87.0 63 73.0
SalBow1G7911 Salvia bowleyana HOM05D001568 ORTHO05D004404 6.2e-16 87.0 63 73.0
Nn3g17638 Nelumbo nucifera HOM05D001568 ORTHO05D004404 1.4e-15 85.9 63 77.8
Manes.01G107200 Manihot esculenta HOM05D001568 ORTHO05D004404 2.3e-15 85.1 63 74.6
Potri.017G109900 Populus trichocarpa HOM05D001568 ORTHO05D004404 2.3e-15 85.1 65 73.8
Nn4g23635 Nelumbo nucifera HOM05D001568 ORTHO05D004404 4.0e-15 84.3 63 74.6
Atru.chr8.777 Acer truncatum HOM05D001568 ORTHO05D004404 8.9e-15 83.2 68 66.2
CAN.G497.17 Capsicum annuum HOM05D001568 ORTHO05D004404 1.2e-14 82.8 63 68.3
Manes.02G064800 Manihot esculenta HOM05D001568 ORTHO05D004404 1.2e-14 82.8 63 71.4
Oeu032864.1 Olea europaea HOM05D001568 ORTHO05D004404 1.2e-14 82.8 64 71.9
Solyc02g089660.2 Solanum lycopersicum HOM05D001568 ORTHO05D004404 1.2e-14 82.8 63 68.3
PGSC0003DMG400010048 Solanum tuberosum HOM05D001568 ORTHO05D004404 1.2e-14 82.8 63 68.3
TAR622G0735 Trochodendron aralioides HOM05D000764 ORTHO05D002006 1.2e-14 82.8 63 73.0
Sed0003724 Sechium edule HOM05D001568 ORTHO05D004404 2.0e-14 82.0 66 68.2
CSS0005518 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 4.4e-14 80.9 63 76.2
CSS0039733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 4.4e-14 80.9 63 76.2
Potri.004G105900 Populus trichocarpa HOM05D001568 ORTHO05D004404 4.4e-14 80.9 63 71.4
Potri.017G109800 Populus trichocarpa HOM05D001568 ORTHO05D004404 4.4e-14 80.9 63 71.4
Hma1.2p1_0588F.1_g184400 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 7.5e-14 80.1 63 71.4
Medtr7g019160 Medicago truncatula HOM05D001568 ORTHO05D004404 7.5e-14 80.1 63 69.8
Prupe.3G242600 Prunus persica HOM05D001568 ORTHO05D004404 1.3e-13 79.3 63 69.8
Eucgr.I02108 Eucalyptus grandis HOM05D001568 ORTHO05D004404 2.2e-13 78.6 64 70.3
FAN14G3562 Fragaria x ananassa HOM05D001568 ORTHO05D004404 2.2e-13 78.6 67 65.7
Phvul.008G021300 Phaseolus vulgaris HOM05D001568 ORTHO05D004404 2.2e-13 78.6 63 68.3
COL.COLO4_08509 Corchorus olitorius HOM05D001568 ORTHO05D004404 3.7e-13 77.8 67 70.1
QL02p053549 Quercus lobata HOM05D001568 ORTHO05D004404 3.7e-13 77.8 62 67.7
Lj1g0007549 Lotus japonicus HOM05D001568 ORTHO05D004404 4.9e-13 77.4 63 68.3
Lalb_Chr17g0336571 Lupinus albus HOM05D001568 ORTHO05D004404 4.9e-13 77.4 63 66.7
Sed0014020 Sechium edule HOM05D001568 ORTHO05D004404 4.9e-13 77.4 65 66.2
FAN05G3918 Fragaria x ananassa HOM05D001568 ORTHO05D004404 6.4e-13 77.0 67 65.7
RcHm_v2.0_Chr2g0163791 Rosa chinensis HOM05D001568 ORTHO05D004404 1.1e-12 76.3 66 65.2
Sabra17G0091900 Salix brachista HOM05D001568 ORTHO05D004404 1.1e-12 76.3 65 66.2
THA.LOC104822692 Tarenaya hassleriana HOM05D001568 ORTHO05D004404 1.9e-12 75.5 64 68.8
Gohir.A07G073000 Gossypium hirsutum HOM05D001568 ORTHO05D004404 5.4e-12 73.9 74 62.2
Glyma.18G279700 Glycine max HOM05D001568 ORTHO05D004404 7.1e-12 73.6 60 66.7
FvH4_6g45650 Fragaria vesca HOM05D001568 ORTHO05D004404 1.2e-11 72.8 63 65.1
TAR629G2968 Trochodendron aralioides HOM05D001568 ORTHO05D004404 1.6e-11 72.4 62 66.1
Gohir.D07G077600 Gossypium hirsutum HOM05D001568 ORTHO05D004404 2.1e-11 72.0 74 60.8
Gorai.001G082100 Gossypium raimondii HOM05D001568 ORTHO05D004404 2.1e-11 72.0 74 60.8
Thecc.04G144700 Theobroma cacao HOM05D001568 ORTHO05D004404 2.7e-11 71.6 66 69.7
CiPaw.04G004300 Carya illinoinensis HOM05D001568 ORTHO05D004404 3.5e-11 71.2 53 75.5
Migut.H00549 Erythranthe guttata HOM05D001568 ORTHO05D004404 3.5e-11 71.2 64 67.2
Lalb_Chr10g0092401 Lupinus albus HOM05D001568 ORTHO05D004404 4.6e-11 70.9 63 63.5
TAR371G0241 Trochodendron aralioides HOM05D001568 ORTHO05D004404 4.6e-11 70.9 55 72.7
arahy.Tifrunner.gnm1.ann1.IG7GQE Arachis hypogaea HOM05D001568 ORTHO05D004404 1.3e-10 69.3 72 56.9
Glyma.19G042000 Glycine max HOM05D001568 ORTHO05D004404 2.3e-10 68.6 65 61.5
Medtr6g016890 Medicago truncatula HOM05D001568 ORTHO05D004404 3.0e-10 68.2 59 61.0
Sp5g22130 Schrenkiella parvula HOM05D001568 ORTHO05D004404 3.0e-10 68.2 79 54.4
arahy.Tifrunner.gnm1.ann1.R2NHXZ Arachis hypogaea HOM05D001568 ORTHO05D004404 3.9e-10 67.8 72 56.9
TPR.G3300 Trifolium pratense HOM05D001568 ORTHO05D004404 3.9e-10 67.8 64 65.6
AUR62008943 Chenopodium quinoa HOM05D001568 ORTHO05D004404 5.1e-10 67.4 67 58.2
Glyma.13G049300 Glycine max HOM05D001568 ORTHO05D004404 5.1e-10 67.4 65 61.5
PGSC0003DMG400019661 Solanum tuberosum HOM05D001568 ORTHO05D004404 5.1e-10 67.4 65 64.6
AL2G25700 Arabidopsis lyrata HOM05D001568 ORTHO05D004404 6.6e-10 67.0 79 54.4
Thhalv10019331m.g Eutrema salsugineum HOM05D001568 ORTHO05D004404 8.6e-10 66.6 79 53.2
Phvul.004G048600 Phaseolus vulgaris HOM05D001568 ORTHO05D004404 8.6e-10 66.6 65 60.0
BolC6t39129H Brassica oleracea HOM05D001568 ORTHO05D004404 1.1e-09 66.2 74 55.4
A07p33830 Brassica napus HOM05D001568 ORTHO05D004404 1.5e-09 65.9 75 54.7
BraA07t31009Z Brassica rapa HOM05D001568 ORTHO05D004404 1.5e-09 65.9 75 54.7
Carub.0002s1347 Capsella rubella HOM05D001568 ORTHO05D004404 1.5e-09 65.9 83 51.8
DCAR_010979 Daucus carota HOM05D001568 ORTHO05D004404 1.5e-09 65.9 70 60.0
DCAR_010982 Daucus carota HOM05D001568 ORTHO05D004404 1.5e-09 65.9 70 60.0
C06p43090 Brassica napus HOM05D001568 ORTHO05D004404 1.9e-09 65.5 76 53.9
Lsat_1_v5_gn_3_94821 Lactuca sativa HOM05D001568 ORTHO05D004404 4.3e-09 64.3 72 55.6
HanXRQChr10g0283701 Helianthus annuus HOM05D001568 ORTHO05D004404 5.6e-09 63.9 73 57.5
Potri.004G105800 Populus trichocarpa HOM05D001568 ORTHO05D004404 1.2e-08 62.8 40 75.0
CARHR059650 Cardamine hirsuta HOM05D001568 ORTHO05D004404 2.8e-08 61.6 41 75.6
Ah.10g037380 Amaranthus hybridus HOM05D001568 ORTHO05D004404 3.6e-08 61.2 67 55.2
ECA246G2394 Erigeron canadensis HOM05D001568 ORTHO05D004404 3.6e-08 61.2 71 56.3
A02p14040 Brassica napus HOM05D001568 ORTHO05D004404 4.7e-08 60.8 42 71.4
BraA02t06465Z Brassica rapa HOM05D001568 ORTHO05D004404 4.7e-08 60.8 42 71.4
C02p22640 Brassica napus HOM05D001568 ORTHO05D004404 6.2e-08 60.5 79 49.4
CANSAT25G0020 Cannabis sativa HOM05D001568 ORTHO05D004404 6.2e-08 60.5 60 58.3
COL.COLO4_32490 Corchorus olitorius HOM05D001568 ORTHO05D004404 2.4e-07 58.5 61 59.0
Lsat_1_v5_gn_4_175441 Lactuca sativa HOM05D001568 ORTHO05D004404 2.4e-07 58.5 66 59.1
BolC2t08417H Brassica oleracea HOM05D001568 ORTHO05D004404 3.1e-07 58.2 42 69.0
Nitab4.5_0001099g0080 Nicotiana tabacum HOM05D001568 ORTHO05D004404 4.0e-07 57.8 54 59.3
CiPaw.03G006700 Carya illinoinensis HOM05D001568 ORTHO05D004404 5.2e-07 57.4 55 61.8
CAN.G606.68 Capsicum annuum HOM05D001568 ORTHO05D004404 6.8e-07 57.0 54 59.3
Gohir.A03G181200 Gossypium hirsutum HOM05D001568 ORTHO05D004404 6.8e-07 57.0 61 57.4
Cpa.g.sc106.34 Carica papaya HOM05D001568 ORTHO05D004404 8.9e-07 56.6 58 53.4
Hma1.2p1_1051F.1_g252100 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 8.9e-07 56.6 58 53.4
Hma1.2p1_2793F.1_g328635 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 8.9e-07 56.6 58 53.4
Manes.10G086400 Manihot esculenta HOM05D001568 ORTHO05D004404 8.9e-07 56.6 58 53.4
Potri.001G290200 Populus trichocarpa HOM05D001568 ORTHO05D004404 8.9e-07 56.6 57 56.1
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.2e-06 56.2 58 53.4
Peaxi162Scf00016g03013 Petunia axillaris HOM05D001568 ORTHO05D004404 1.2e-06 56.2 54 55.6
RcHm_v2.0_Chr6g0248611 Rosa chinensis HOM05D001568 ORTHO05D004404 1.2e-06 56.2 61 50.8
Solyc01g106890.2 Solanum lycopersicum HOM05D001568 ORTHO05D004404 1.2e-06 56.2 54 57.4
Sopen01g049170 Solanum pennellii HOM05D001568 ORTHO05D004404 1.2e-06 56.2 54 57.4
TWI59G0092 Tripterygium wilfordii HOM05D001568 ORTHO05D004404 1.2e-06 56.2 56 58.9
QL11p029492 Quercus lobata HOM05D001568 ORTHO05D004404 1.5e-06 55.8 54 55.6
PGSC0003DMG400025934 Solanum tuberosum HOM05D001568 ORTHO05D004404 1.5e-06 55.8 54 57.4
Sed0007286 Sechium edule HOM05D001568 ORTHO05D004404 2.0e-06 55.5 60 56.7
PGSC0003DMG400012835 Solanum tuberosum HOM05D001568 ORTHO05D004404 2.0e-06 55.5 58 50.0
Atru.chr5.2306 Acer truncatum HOM05D001568 ORTHO05D004404 2.6e-06 55.1 61 50.8
Hma1.2p1_0661F.1_g198120 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 2.6e-06 55.1 60 56.7
Nn5g30644 Nelumbo nucifera HOM05D001568 ORTHO05D004404 2.6e-06 55.1 58 51.7
Nitab4.5_0001458g0030 Nicotiana tabacum HOM05D001568 ORTHO05D004404 2.6e-06 55.1 54 55.6
Oeu021354.1 Olea europaea HOM05D001568 ORTHO05D004404 2.6e-06 55.1 54 53.7
PSO017G7292 Papaver somniferum HOM05D001568 ORTHO05D004404 2.6e-06 55.1 56 57.1
PSO170G4708 Papaver somniferum HOM05D001568 ORTHO05D004404 2.6e-06 55.1 56 57.1
CSS0000365 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 3.4e-06 54.7 60 53.3
CiPaw.05G020400 Carya illinoinensis HOM05D001568 ORTHO05D004404 3.4e-06 54.7 63 55.6
Peaxi162Scf00003g02832 Petunia axillaris HOM05D001568 ORTHO05D004404 3.4e-06 54.7 59 50.8
TAR625G0364 Trochodendron aralioides HOM05D001568 ORTHO05D004404 3.4e-06 54.7 54 53.7
Duzib132G0295 Durio zibethinus HOM05D001568 ORTHO05D004404 4.4e-06 54.3 60 58.3
MSTRG.23836 Avicennia marina HOM05D001568 ORTHO05D004404 5.8e-06 53.9 68 51.5
Haze_10310 Corylus avellana HOM05D001568 ORTHO05D004404 5.8e-06 53.9 60 56.7
Gohir.D02G203199 Gossypium hirsutum HOM05D001568 ORTHO05D004404 5.8e-06 53.9 61 55.7
Manes.07G057600 Manihot esculenta HOM05D001568 ORTHO05D004404 5.8e-06 53.9 58 50.0
Nn6g34513 Nelumbo nucifera HOM05D001568 ORTHO05D004404 5.8e-06 53.9 58 50.0
Oeu037288.1 Olea europaea HOM05D001568 ORTHO05D004404 5.8e-06 53.9 58 50.0
Potri.009G085800 Populus trichocarpa HOM05D001568 ORTHO05D004404 5.8e-06 53.9 60 56.7
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 5.8e-06 53.9 54 55.6
Thecc.02G119400 Theobroma cacao HOM05D001568 ORTHO05D004404 5.8e-06 53.9 58 53.4
TAR376G0823 Trochodendron aralioides HOM05D001568 ORTHO05D004404 5.8e-06 53.9 58 51.7
Psat0s6663g0040 Pisum sativum HOM05D001568 ORTHO05D004404 7.6e-06 53.5 57 54.4
CSS0019733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 9.9e-06 53.1 60 55.0
Duzib052G0823 Durio zibethinus HOM05D001568 ORTHO05D004404 9.9e-06 53.1 58 50.0
TAR628G0963 Trochodendron aralioides HOM05D001568 ORTHO05D004404 9.9e-06 53.1 54 55.6

Acer truncatum (2 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (3 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (4 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (4 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Nicotiana tabacum (2 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (6 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (2 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (4 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (6 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings