Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 6.1e-36 153.7 80 100.0
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 6.1e-36 153.7 80 100.0
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 6.1e-36 153.7 80 100.0
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 6.1e-36 153.7 80 100.0
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 6.1e-36 153.7 80 100.0
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 6.1e-36 153.7 80 100.0
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 6.1e-36 153.7 80 100.0
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 6.1e-36 153.7 80 100.0
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 1.6e-33 145.6 80 95.0
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.2e-20 102.8 85 63.5
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 6.7e-19 97.1 87 63.2
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 8.8e-19 96.7 85 60.0
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.2e-17 92.0 84 58.3
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 3.7e-17 91.3 81 59.3
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 3.7e-17 91.3 90 54.4
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 4.8e-17 90.9 85 57.6
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 4.8e-17 90.9 87 59.8
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 6.3e-17 90.5 88 54.5
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 6.3e-17 90.5 89 59.6
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.4e-16 89.4 81 58.0
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.8e-16 89.0 85 54.1
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 3.1e-16 88.2 81 58.0
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 4.1e-16 87.8 81 58.0
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 4.1e-16 87.8 86 58.1
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-15 86.3 93 53.8
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 2.0e-15 85.5 93 53.8
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 2.0e-15 85.5 93 53.8
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 2.0e-15 85.5 82 59.8
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 2.6e-15 85.1 82 61.0
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 2.6e-15 85.1 87 57.5
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.5e-15 84.3 87 52.9
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 5.9e-15 84.0 88 55.7
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 1.3e-14 82.8 76 55.3
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.9e-14 81.6 83 53.0
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 2.9e-14 81.6 89 56.2
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 3.8e-14 81.3 85 57.6
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 5.0e-14 80.9 84 54.8
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 6.5e-14 80.5 83 54.2
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.1e-13 79.7 84 52.4
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.5e-13 79.3 85 56.5
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 1.5e-13 79.3 85 54.1
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.5e-13 78.6 83 53.0
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 5.5e-13 77.4 87 52.9
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 9.4e-13 76.6 88 48.9
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 9.4e-13 76.6 88 48.9
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.2e-12 76.3 87 51.7
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 1.6e-12 75.9 94 51.1
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 1.6e-12 75.9 101 49.5
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 4.7e-12 74.3 88 47.7
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 8.0e-12 73.6 87 50.6
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 1.4e-11 72.8 86 53.5
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 1.4e-11 72.8 107 41.1
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 1.8e-11 72.4 86 51.2
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 3.0e-11 71.6 87 54.0
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 5.2e-11 70.9 88 50.0
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 5.2e-11 70.9 88 50.0
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 5.2e-11 70.9 89 47.2
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 5.2e-11 70.9 80 55.0
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 8.8e-11 70.1 87 52.9
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 1.1e-10 69.7 88 48.9
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 1.5e-10 69.3 93 47.3
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 1.5e-10 69.3 93 47.3
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 2.0e-10 68.9 87 51.7
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 2.0e-10 68.9 75 50.7
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 5.7e-10 67.4 57 61.4
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 7.5e-10 67.0 90 45.6
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 7.5e-10 67.0 107 39.3
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 9.7e-10 66.6 74 48.6
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 9.7e-10 66.6 126 34.9
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 1.3e-09 66.2 70 51.4
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 2.2e-09 65.5 85 49.4
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 2.8e-09 65.1 87 46.0
Potri.001G172900 Populus trichocarpa HOM05D008630 ORTHO05D010727 3.7e-09 64.7 71 49.3
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 6.3e-09 63.9 75 50.7
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 8.2e-09 63.5 51 62.7
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 1.1e-08 63.2 89 51.7
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-08 63.2 107 37.4
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-08 63.2 107 37.4
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 1.1e-08 63.2 107 37.4
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 1.1e-08 63.2 83 44.6
TWI53G0373 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 1.1e-08 63.2 38 81.6
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 1.4e-08 62.8 83 48.2
THA.LOC104810501 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 1.4e-08 62.8 87 49.4
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 1.8e-08 62.4 88 50.0
HPP92_007288 Vanilla planifolia HOM05D005842 ORTHO05D007077 1.8e-08 62.4 105 40.0
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.4e-08 62.0 89 51.7
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 2.4e-08 62.0 89 50.6
MELO3C023400.2 Cucumis melo HOM05D008630 ORTHO05D010727 2.4e-08 62.0 81 46.9
Sed0009523 Sechium edule HOM05D008630 ORTHO05D010727 2.4e-08 62.0 70 47.1
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 3.1e-08 61.6 76 51.3
TWI18G0017 Tripterygium wilfordii HOM05D008630 ORTHO05D010727 3.1e-08 61.6 78 47.4
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 4.1e-08 61.2 108 38.0
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 4.1e-08 61.2 108 38.0
THA.LOC104818037 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 4.1e-08 61.2 80 48.8
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 7.0e-08 60.5 76 50.0
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 9.1e-08 60.1 86 47.7
Sopen12g032850 Solanum pennellii HOM05D005842 ORTHO05D007077 1.2e-07 59.7 78 44.9
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.6e-07 59.3 107 39.3
Solyc12g097050.2 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.6e-07 59.3 78 44.9
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 2.0e-07 58.9 101 39.6
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 2.0e-07 58.9 107 35.5
HanXRQChr14g0434231 Helianthus annuus HOM05D005842 ORTHO05D007077 2.0e-07 58.9 84 44.0
PGSC0003DMG400008623 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.0e-07 58.9 78 44.9
Thecc.06G073200 Theobroma cacao HOM05D008630 ORTHO05D010727 2.0e-07 58.9 70 44.3
Dinv38096 Davidia involucrata HOM05D008630 ORTHO05D010727 4.5e-07 57.8 83 42.2
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 4.5e-07 57.8 84 39.3
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 5.9e-07 57.4 107 39.3
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 7.7e-07 57.0 49 63.3
Cpa.g.sc336.6 Carica papaya HOM05D008630 ORTHO05D010727 1.0e-06 56.6 74 45.9
Lalb_Chr03g0036861 Lupinus albus HOM05D005842 ORTHO05D007077 1.3e-06 56.2 64 53.1
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 1.7e-06 55.8 94 40.4
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 3.8e-06 54.7 107 33.6
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 3.8e-06 54.7 93 43.0
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 3.8e-06 54.7 93 43.0
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 3.8e-06 54.7 93 43.0
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 3.8e-06 54.7 93 43.0
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 3.8e-06 54.7 107 37.4
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 3.8e-06 54.7 84 41.7
TPR.G23959 Trifolium pratense HOM05D005842 ORTHO05D007077 3.8e-06 54.7 63 54.0
HPP92_007287 Vanilla planifolia HOM05D005842 ORTHO05D007077 5.0e-06 54.3 103 34.0
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 8.5e-06 53.5 107 33.6

Acer truncatum (4 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (7 genes)
Brassica napus (4 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (2 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (0 genes)
Coffea canephora (9 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (4 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (2 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (8 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (0 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (3 genes)
Solanum pennellii (3 genes)
Solanum tuberosum (3 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (2 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings