Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g09970 Coffea canephora HOM05D006471 ORTHO05D008157 1.8e-170 602.4 296 100.0
Dinv17647 Davidia involucrata HOM05D000200 ORTHO05D001546 2.3e-104 382.9 331 64.4
Actinidia04343 Actinidia chinensis HOM05D006471 ORTHO05D008157 2.5e-103 379.4 309 63.8
CSS0032634 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 1.1e-101 374.0 297 64.6
CSS0035224 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 1.8e-101 373.2 297 64.3
Oeu006329.1 Olea europaea HOM05D006471 ORTHO05D008157 1.2e-100 370.5 294 66.7
TAR628G0373 Trochodendron aralioides HOM05D006471 ORTHO05D008157 8.4e-99 364.4 309 62.8
Ciclev10031833m.g Citrus clementina HOM05D006471 ORTHO05D008157 4.1e-98 362.1 296 63.2
Solyc04g008990.3 Solanum lycopersicum HOM05D006471 ORTHO05D008157 2.1e-97 359.8 327 60.2
Sopen04g004170 Solanum pennellii HOM05D006471 ORTHO05D008157 2.1e-97 359.8 333 59.5
PGSC0003DMG400011512 Solanum tuberosum HOM05D006471 ORTHO05D008157 2.3e-96 356.3 333 59.5
Hma1.2p1_0044F.1_g026290 Hydrangea macrophylla HOM05D006471 ORTHO05D008157 3.0e-96 355.9 313 60.7
Lj3A846G60 Lonicera japonica HOM05D006471 ORTHO05D008157 3.0e-96 355.9 274 65.3
CiPaw.05G172000 Carya illinoinensis HOM05D006471 ORTHO05D008157 3.3e-95 352.4 316 59.2
Manes.04G162800 Manihot esculenta HOM05D006471 ORTHO05D008157 4.3e-95 352.1 296 62.5
DCAR_002605 Daucus carota HOM05D000200 ORTHO05D001546 5.6e-95 351.7 304 61.5
Peaxi162Scf00681g00221 Petunia axillaris HOM05D006471 ORTHO05D008157 2.1e-94 349.7 307 63.2
Nitab4.5_0005997g0050 Nicotiana tabacum HOM05D006471 ORTHO05D008157 6.2e-94 348.2 273 67.0
Cfa008776 Carpinus fangiana HOM05D006471 ORTHO05D008157 2.4e-93 346.3 293 61.8
Thecc.02G154800 Theobroma cacao HOM05D006471 ORTHO05D008157 2.4e-93 346.3 300 62.0
Nitab4.5_0004979g0070 Nicotiana tabacum HOM05D006471 ORTHO05D008157 4.0e-93 345.5 273 66.3
Atru.chr11.1240 Acer truncatum HOM05D006471 ORTHO05D008157 5.2e-93 345.1 300 61.3
Haze_11788 Corylus avellana HOM05D006471 ORTHO05D008157 8.9e-93 344.4 292 61.6
Potri.007G075500 Populus trichocarpa HOM05D006471 ORTHO05D008157 1.2e-92 344.0 301 61.8
COL.COLO4_33107 Corchorus olitorius HOM05D006471 ORTHO05D008157 2.6e-92 342.8 300 60.0
Duzib248G0471 Durio zibethinus HOM05D000200 ORTHO05D001546 3.4e-92 342.4 293 60.8
Thhalv10013886m.g Eutrema salsugineum HOM05D006471 ORTHO05D008157 5.8e-92 341.7 300 60.0
Rhsim12G0193800 Rhododendron simsii HOM05D006471 ORTHO05D008157 5.8e-92 341.7 295 61.4
CAN.G274.15 Capsicum annuum HOM05D006471 ORTHO05D008157 7.6e-92 341.3 305 60.3
RcHm_v2.0_Chr4g0446941 Rosa chinensis HOM05D006471 ORTHO05D008157 9.9e-92 340.9 330 57.9
Sabra07G0063800 Salix brachista HOM05D006471 ORTHO05D008157 9.9e-92 340.9 294 63.9
TWI74G1585 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 3.8e-91 339.0 300 61.3
TWI77G0721 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 6.4e-91 338.2 300 62.3
CARHR204730 Cardamine hirsuta HOM05D006471 ORTHO05D008157 1.1e-90 337.4 300 59.3
Cpa.g.sc60.91 Carica papaya HOM05D006471 ORTHO05D008157 1.4e-90 337.0 284 62.7
Sp6g34600 Schrenkiella parvula HOM05D006471 ORTHO05D008157 2.4e-90 336.3 292 59.9
Duzib132G0448 Durio zibethinus HOM05D006471 ORTHO05D008157 4.2e-90 335.5 300 59.7
Gorai.012G135400 Gossypium raimondii HOM05D006471 ORTHO05D008157 5.4e-90 335.1 300 59.0
BcaB01g05611 Brassica carinata HOM05D006471 ORTHO05D008157 1.6e-89 333.6 294 58.8
SalBow2G1748 Salvia bowleyana HOM05D006471 ORTHO05D008157 1.6e-89 333.6 299 59.5
Gohir.A04G109424 Gossypium hirsutum HOM05D006471 ORTHO05D008157 2.1e-89 333.2 300 58.7
MD16G1004200 Malus domestica HOM05D006471 ORTHO05D008157 2.1e-89 333.2 301 60.8
Gohir.D04G148900 Gossypium hirsutum HOM05D006471 ORTHO05D008157 2.7e-89 332.8 293 59.4
MSTRG.8091 Avicennia marina HOM05D006471 ORTHO05D008157 6.0e-89 331.6 292 59.9
AL6G18780 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 7.8e-89 331.3 296 59.1
Carub.0006s0724 Capsella rubella HOM05D006471 ORTHO05D008157 7.8e-89 331.3 300 58.7
MBI06_g44273_MAGBIO Magnolia biondii HOM05D006471 ORTHO05D008157 7.8e-89 331.3 310 59.4
Sc10g0006980 Simmondsia chinensis HOM05D006471 ORTHO05D008157 1.0e-88 330.9 305 58.0
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 2.3e-88 329.7 298 59.4
vmacro16923 Vaccinium macrocarpon HOM05D006471 ORTHO05D008157 3.0e-88 329.3 274 62.8
GSVIVG01034416001 Vitis vinifera HOM05D006471 ORTHO05D008157 3.0e-88 329.3 274 63.9
Eucgr.G02586 Eucalyptus grandis HOM05D006471 ORTHO05D008157 5.1e-88 328.6 297 58.9
FvH4_4g37140 Fragaria vesca HOM05D006471 ORTHO05D008157 5.1e-88 328.6 298 59.1
SGA_v2.0_scaffold92G28263 Striga asiatica HOM05D006471 ORTHO05D008157 8.7e-88 327.8 340 55.9
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 1.1e-87 327.4 299 57.5
MSTRG.428 Avicennia marina HOM05D006471 ORTHO05D008157 1.5e-87 327.0 322 54.7
EL10Ac9g22981 Beta vulgaris HOM05D006471 ORTHO05D008157 2.5e-87 326.2 308 57.8
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 2.5e-87 326.2 271 62.4
Migut.L00869 Erythranthe guttata HOM05D006471 ORTHO05D008157 3.3e-87 325.9 300 59.7
BcaB01g05607 Brassica carinata HOM05D006471 ORTHO05D008157 7.3e-87 324.7 224 72.3
CANSAT78G1799 Cannabis sativa HOM05D006471 ORTHO05D008157 7.3e-87 324.7 300 58.0
AT5G08340 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 2.1e-86 323.2 300 57.3
A03p03780 Brassica napus HOM05D006471 ORTHO05D008157 6.2e-86 321.6 225 72.0
BraA03t09725Z Brassica rapa HOM05D006471 ORTHO05D008157 6.2e-86 321.6 225 72.0
AUR62032950 Chenopodium quinoa HOM05D006471 ORTHO05D008157 8.1e-86 321.2 286 60.8
AUR62017731 Chenopodium quinoa HOM05D006471 ORTHO05D008157 1.1e-85 320.9 308 56.8
THA.LOC104800739 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 1.1e-85 320.9 227 69.6
C03p04260 Brassica napus HOM05D006471 ORTHO05D008157 1.8e-85 320.1 225 72.0
BolC3t12958H Brassica oleracea HOM05D006471 ORTHO05D008157 1.8e-85 320.1 225 72.0
Sed0003381 Sechium edule HOM05D006471 ORTHO05D008157 5.3e-85 318.5 294 57.5
Lsat_1_v5_gn_0_15460 Lactuca sativa HOM05D006471 ORTHO05D008157 1.5e-84 317.0 219 71.7
ECA240G3241 Erigeron canadensis HOM05D006471 ORTHO05D008157 2.6e-84 316.2 215 72.6
Aqoxy2G00030 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 4.5e-84 315.5 312 56.1
HanXRQChr03g0076951 Helianthus annuus HOM05D006471 ORTHO05D008157 5.8e-84 315.1 287 59.2
PSO782G0560 Papaver somniferum HOM05D006471 ORTHO05D008157 1.7e-83 313.5 298 56.7
Psat6g234000 Pisum sativum HOM05D006471 ORTHO05D008157 2.2e-83 313.2 254 66.9
PGR142G1667 Punica granatum HOM05D006471 ORTHO05D008157 2.9e-83 312.8 227 70.5
Nn8g40194 Nelumbo nucifera HOM05D006471 ORTHO05D008157 3.8e-83 312.4 271 60.5
Glyma.10G286400 Glycine max HOM05D006471 ORTHO05D008157 4.9e-83 312.0 224 70.5
Aqoxy2G01235 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 6.4e-83 311.6 312 55.1
Ca_11258_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 1.1e-82 310.8 212 74.1
VMungo0720G2382 Vigna mungo HOM05D006471 ORTHO05D008157 1.4e-82 310.5 224 70.5
AT5G23330 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 1.9e-82 310.1 303 55.4
CsaV3_5G029010 Cucumis sativus L. HOM05D006471 ORTHO05D008157 1.9e-82 310.1 220 71.4
PSO170G1614 Papaver somniferum HOM05D006471 ORTHO05D008157 1.9e-82 310.1 298 56.0
Ah.16g106450 Amaranthus hybridus HOM05D000154 ORTHO05D000092 2.4e-82 309.7 217 70.5
Lj5g0013377 Lotus japonicus HOM05D006471 ORTHO05D008157 5.4e-82 308.5 239 68.2
Medtr1g114560 Medicago truncatula HOM05D006471 ORTHO05D008157 7.1e-82 308.1 213 74.2
THA.LOC104818378 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 7.1e-82 308.1 228 68.0
Lalb_Chr06g0163931 Lupinus albus HOM05D006471 ORTHO05D008157 9.3e-82 307.8 244 66.0
TPR.G4059 Trifolium pratense HOM05D006471 ORTHO05D008157 1.6e-81 307.0 213 72.8
CARHR190210 Cardamine hirsuta HOM05D006471 ORTHO05D008157 4.6e-81 305.4 296 56.4
Nn2g12513 Nelumbo nucifera HOM05D006471 ORTHO05D008157 6.0e-81 305.1 217 68.7
Phvul.007G014500 Phaseolus vulgaris HOM05D006471 ORTHO05D008157 2.3e-80 303.1 224 69.6
unitig_749.g13340 Utricularia gibba HOM05D006471 ORTHO05D008157 2.3e-80 303.1 232 64.7
AL6G34590 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 1.5e-79 300.4 224 68.3
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.5e-79 300.4 203 73.4
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 4.3e-79 298.9 240 64.6
ClCG02G014150 Citrullus lanatus HOM05D006471 ORTHO05D008157 7.4e-79 298.1 335 50.4
ATR0665G473 Amborella trichopoda HOM05D006471 ORTHO05D008157 8.1e-78 294.7 273 59.0
CDE02G4670 Ceratophyllum demersum HOM05D006471 ORTHO05D008157 1.8e-77 293.5 208 69.2
SGA_v2.0_scaffold42G16129 Striga asiatica HOM05D006471 ORTHO05D008157 1.5e-76 290.4 312 55.8
Os03g0801700 Oryza sativa ssp. japonica HOM05D006471 ORTHO05D008157 7.1e-74 281.6 244 59.4
MD13G1003200 Malus domestica HOM05D006471 ORTHO05D008157 2.7e-73 279.6 175 78.3
Zm00001eb061200 Zea mays HOM05D006471 ORTHO05D008157 7.9e-73 278.1 197 69.5
FAN17G0671 Fragaria x ananassa HOM05D006471 ORTHO05D008157 4.3e-71 272.3 257 58.0
FAN07G1501 Fragaria x ananassa HOM05D002605 ORTHO05D002842 1.1e-69 267.7 179 74.3
SEGI_40912 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 5.3e-69 265.4 193 68.9
Prupe.1G349200 Prunus persica HOM05D006471 ORTHO05D008157 1.5e-68 263.8 238 59.7
MELO3C011756.2 Cucumis melo HOM05D006471 ORTHO05D008157 2.0e-68 263.5 289 51.9
HPP92_017784 Vanilla planifolia HOM05D006471 ORTHO05D008157 2.9e-67 259.6 195 66.2
Pp3c5_28930 Physcomitrium patens HOM05D006471 ORTHO05D008157 6.5e-67 258.5 191 64.9
arahy.Tifrunner.gnm1.ann1.V4ETXF Arachis hypogaea HOM05D006471 ORTHO05D008157 4.2e-66 255.8 285 51.6
QL08p056974 Quercus lobata HOM05D006471 ORTHO05D008157 2.1e-65 253.4 229 58.5
Mapoly0019s0104 Marchantia polymorpha HOM05D006471 ORTHO05D008157 5.7e-63 245.4 195 61.5
SMO141G0020 Selaginella moellendorffii HOM05D006471 ORTHO05D008157 7.4e-63 245.0 190 60.5
Pp3c14_5150 Physcomitrium patens HOM05D006471 ORTHO05D008157 1.6e-57 227.3 212 53.8
Carub.0006s2111 Capsella rubella HOM05D006471 ORTHO05D008157 5.0e-51 205.7 152 69.1
AagrBONN_evm.TU.Sc2ySwM_362.1554 Anthoceros agrestis HOM05D006471 ORTHO05D008157 5.9e-44 182.2 131 64.1
Glyma.20G102800 Glycine max HOM05D006471 ORTHO05D008157 3.2e-42 176.4 274 42.3
MCO07G267 Micromonas commoda HOM05D006471 ORTHO05D008157 7.2e-42 175.3 207 47.8
Sc06g0004050 Simmondsia chinensis HOM05D006471 ORTHO05D008157 5.0e-35 152.5 143 58.7
FAN12G2193 Fragaria x ananassa HOM05D006471 ORTHO05D008157 1.0e-27 128.3 94 68.1
QL08p056966 Quercus lobata HOM05D006471 ORTHO05D008157 3.7e-22 109.8 69 75.4
Carub.0006s2110 Capsella rubella HOM05D006471 ORTHO05D008157 4.8e-22 109.4 79 67.1
Cre13.g607600 Chlamydomonas reinhardtii HOM05D006471 ORTHO05D008157 3.1e-21 106.7 296 30.7
BolC9t53696H Brassica oleracea HOM05D006471 ORTHO05D008157 5.9e-12 75.9 84 47.6
arahy.Tifrunner.gnm1.ann1.SQAN1F Arachis hypogaea HOM05D006471 ORTHO05D008157 1.0e-11 75.1 47 74.5
SEGI_34336 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 5.7e-07 59.3 71 46.5

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (3 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (4 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings