Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 5.7e-181 637.5 331 100.0
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.0e-169 600.1 327 94.2
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.5e-168 595.5 327 93.3
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 4.2e-168 594.7 331 92.4
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 7.2e-168 594.0 327 93.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 7.2e-168 594.0 329 92.4
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 6.1e-167 590.9 327 92.7
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 1.0e-166 590.1 327 92.4
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 1.4e-166 589.7 329 91.5
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 8.9e-166 587.0 327 92.0
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 8.9e-166 587.0 327 92.0
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-165 586.6 335 91.0
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.2e-165 586.6 329 90.9
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 5.7e-165 584.3 327 91.4
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.6e-162 576.2 328 90.2
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 3.5e-162 575.1 328 89.3
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.3e-161 573.2 328 89.0
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 8.6e-161 570.5 328 88.7
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 8.6e-161 570.5 327 89.3
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.1e-160 570.1 328 89.3
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.9e-160 569.3 328 89.6
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.5e-160 568.9 328 89.3
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 4.3e-160 568.2 329 88.1
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 4.3e-160 568.2 328 89.3
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 9.5e-160 567.0 326 89.6
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.2e-159 566.6 328 87.8
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 4.7e-159 564.7 327 88.7
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.4e-158 563.1 330 87.3
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.8e-158 562.8 325 88.9
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 3.1e-158 562.0 332 86.7
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 8.9e-158 560.5 328 87.2
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.4e-157 558.5 325 88.9
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.4e-157 558.5 325 88.9
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 5.8e-157 557.8 327 87.5
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 9.8e-157 557.0 325 88.6
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 9.8e-157 557.0 327 87.8
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.2e-156 555.8 327 87.5
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.9e-156 554.7 328 87.2
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.4e-156 554.3 328 87.5
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.1e-155 553.5 327 87.2
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.4e-155 553.1 327 86.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 3.2e-155 552.0 330 87.6
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 5.4e-155 551.2 327 86.2
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 9.2e-155 550.4 331 86.7
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 4.6e-154 548.1 327 84.7
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 6.0e-154 547.7 330 85.2
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 6.0e-154 547.7 330 85.2
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.0e-153 547.0 328 85.4
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 1.3e-153 546.6 328 85.4
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 1.3e-153 546.6 328 85.4
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 1.3e-153 546.6 328 85.4
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 1.3e-153 546.6 328 85.4
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.3e-153 546.6 330 84.8
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.3e-153 546.6 330 84.2
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 1.7e-153 546.2 328 84.1
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.7e-153 546.2 330 84.2
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 3.0e-153 545.4 330 84.5
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 3.0e-153 545.4 328 85.1
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 3.9e-153 545.0 327 85.0
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 5.0e-153 544.7 327 85.0
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 5.0e-153 544.7 330 84.2
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.9e-152 542.7 328 84.8
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 2.5e-152 542.3 330 83.9
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.3e-152 542.0 328 84.8
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 4.3e-152 541.6 328 84.5
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 5.6e-152 541.2 328 84.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 5.6e-152 541.2 326 85.0
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 5.6e-152 541.2 325 85.2
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 9.5e-152 540.4 328 85.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 1.2e-151 540.0 331 83.7
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.2e-151 540.0 330 83.0
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 2.1e-151 539.3 328 84.1
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.1e-151 539.3 328 83.2
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.8e-151 538.9 328 83.5
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.6e-151 538.5 328 83.5
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 3.6e-151 538.5 328 83.2
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 6.2e-151 537.7 329 84.5
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.4e-150 536.6 328 83.5
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.4e-150 536.6 328 85.1
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.8e-150 536.2 363 79.3
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 2.3e-150 535.8 382 75.9
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.1e-150 535.4 327 83.2
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.1e-150 535.4 331 83.4
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.5e-149 533.1 329 83.0
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 3.4e-149 531.9 355 77.7
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.3e-148 530.0 327 85.3
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 4.9e-148 528.1 327 82.3
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.3e-148 527.3 328 83.8
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.9e-147 526.2 328 83.5
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 4.1e-147 525.0 328 82.3
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 7.1e-147 524.2 333 80.2
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.1e-146 522.7 333 79.9
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 6.0e-146 521.2 451 65.0
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 7.8e-146 520.8 325 82.2
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.3e-145 520.0 314 84.4
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.1e-144 516.9 303 86.8
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 4.3e-144 515.0 329 82.4
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 1.1e-142 510.4 329 82.7
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.3e-140 503.4 327 79.2
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.7e-140 503.1 291 86.6
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 2.2e-140 502.7 331 81.9
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.9e-140 502.3 328 80.2
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 6.0e-138 494.6 328 77.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 9.6e-136 487.3 326 75.5
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 2.0e-133 479.6 330 74.5
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-132 476.5 298 82.9
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.9e-131 473.0 374 70.6
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.2e-130 470.3 325 73.2
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.3e-128 462.2 326 75.8
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 1.4e-126 456.8 279 82.1
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 4.2e-123 445.3 329 72.9
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 1.0e-121 440.7 335 71.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.8e-116 422.2 234 92.3
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 9.6e-112 407.5 323 68.1
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.6e-109 399.4 317 63.7
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.7e-108 396.7 324 61.1
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.0e-105 387.5 329 62.0
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.1e-105 385.2 233 82.4
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 2.4e-102 376.3 273 72.2
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 5.0e-100 368.6 320 62.8
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 9.0e-94 347.8 197 90.9
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.4e-91 340.5 234 72.6
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.2e-90 337.4 328 61.6
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.4e-89 334.0 334 60.5
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 7.4e-88 328.2 220 80.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-87 327.4 227 74.9
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 4.1e-86 322.4 220 78.6
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 2.3e-81 306.6 220 77.3
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.4e-78 297.4 167 88.6
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 2.1e-74 283.5 333 45.0
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.0e-69 266.9 161 86.3
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.1e-67 261.2 328 52.4
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.8e-65 253.8 163 78.5
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 6.3e-63 245.4 268 54.1
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 3.6e-58 229.6 132 87.1
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 4.5e-53 212.6 130 83.8
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.5e-43 181.0 161 64.0
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.1e-41 173.3 100 89.0
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.5e-40 171.0 149 60.4
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 2.4e-38 163.7 103 81.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.3e-36 157.9 205 49.3
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.1e-35 154.8 89 84.3
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 5.6e-35 152.5 88 88.6
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 3.1e-33 146.7 90 85.6
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.7e-31 139.8 80 86.2
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.1e-29 134.0 69 89.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.7e-29 133.7 88 76.1
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-28 131.0 74 89.2
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.1e-27 128.3 77 85.7
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 4.7e-26 122.9 72 80.6
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.5e-24 117.9 72 83.3
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.9e-23 113.6 75 72.0
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 7.1e-22 109.0 69 78.3
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 4.7e-18 96.3 65 80.0
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-15 87.8 62 77.4
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.1e-11 75.1 85 54.1
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 3.4e-08 63.5 48 68.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings