Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 0.0e+00 1102.0 547 100.0
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 6.8e-171 604.7 618 58.9
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 3.2e-160 569.3 585 57.8
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 4.7e-156 555.4 586 56.0
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 1.9e-149 533.5 564 55.5
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 1.3e-142 510.8 616 52.3
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 7.4e-125 451.8 567 48.7
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.5e-122 444.1 549 49.2
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 7.6e-122 441.8 588 48.6
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 1.4e-120 437.6 577 47.8
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 1.9e-120 437.2 570 47.9
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 2.3e-118 430.3 423 56.7
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 2.1e-116 423.7 445 54.8
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 1.8e-115 420.6 418 54.8
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 4.5e-114 416.0 428 54.4
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 1.0e-110 404.8 323 65.9
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 1.6e-108 397.5 439 53.1
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 2.1e-108 397.1 420 55.0
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 3.7e-108 396.4 431 52.9
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 1.2e-106 391.3 429 53.6
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 1.5e-106 391.0 443 52.1
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 2.0e-106 390.6 434 53.2
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.0e-105 388.3 434 52.3
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 5.0e-105 386.0 392 56.4
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 1.1e-104 384.8 408 54.7
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 1.4e-104 384.4 310 64.5
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 1.2e-103 381.3 303 65.0
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 2.1e-103 380.6 411 54.7
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 4.6e-103 379.4 320 61.9
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 8.7e-102 375.2 453 51.2
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.1e-101 374.8 469 49.5
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 1.1e-101 374.8 314 62.7
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 2.5e-101 373.6 385 56.1
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 3.3e-101 373.2 596 44.3
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 5.7e-101 372.5 499 48.1
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 1.3e-100 371.3 364 57.4
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 1.6e-100 370.9 364 57.7
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 2.8e-100 370.2 446 50.7
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 6.3e-100 369.0 391 55.0
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 1.1e-99 368.2 316 61.7
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 1.1e-99 368.2 530 45.3
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 3.1e-99 366.7 306 64.4
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 3.1e-99 366.7 306 64.4
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 3.1e-99 366.7 452 50.9
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 1.0e-97 361.7 295 64.7
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 1.3e-97 361.3 577 43.8
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 1.7e-97 360.9 372 54.6
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 2.2e-97 360.5 315 62.5
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 2.2e-97 360.5 435 49.2
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 3.8e-97 359.8 476 48.1
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 8.5e-97 358.6 430 50.0
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 1.9e-96 357.5 278 63.7
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 2.5e-96 357.1 234 71.8
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 3.2e-96 356.7 583 42.5
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 9.4e-96 355.1 322 59.9
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 3.6e-95 353.2 285 64.2
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 4.6e-95 352.8 403 53.3
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 4.6e-95 352.8 394 53.3
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 4.6e-95 352.8 287 62.4
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 1.0e-94 351.7 396 53.5
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 5.1e-94 349.4 394 52.8
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 8.8e-94 348.6 428 50.2
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 1.1e-93 348.2 508 44.7
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 1.5e-93 347.8 537 44.7
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 1.3e-92 344.7 394 52.3
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 1.7e-92 344.4 274 64.2
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 4.8e-92 342.8 434 49.1
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 1.1e-91 341.7 431 49.7
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.4e-91 341.3 274 63.5
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 1.4e-91 341.3 299 61.5
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 6.9e-91 339.0 522 44.8
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 1.5e-90 337.8 198 81.3
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 4.5e-90 336.3 298 61.4
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 1.0e-89 335.1 197 79.2
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 2.9e-89 333.6 413 48.4
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 6.5e-89 332.4 302 59.3
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 8.5e-89 332.0 299 60.2
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 5.5e-88 329.3 201 77.6
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 5.5e-88 329.3 374 52.1
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 1.2e-87 328.2 531 42.7
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 1.2e-87 328.2 409 50.6
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 2.1e-87 327.4 299 59.2
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.1e-87 327.4 232 70.3
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 2.1e-87 327.4 203 76.8
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 4.7e-87 326.2 233 70.4
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 6.1e-87 325.9 302 57.9
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 5.2e-86 322.8 299 57.9
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 2.6e-85 320.5 321 56.1
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 4.4e-85 319.7 218 73.4
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 4.4e-85 319.7 278 61.5
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 7.4e-85 318.9 460 45.7
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 9.7e-85 318.5 530 42.3
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 1.7e-84 317.8 300 56.7
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 6.3e-84 315.8 277 59.2
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 1.1e-83 315.1 302 58.6
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 2.4e-83 313.9 227 68.7
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 3.1e-83 313.5 227 68.7
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 7.7e-82 308.9 507 42.4
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 7.7e-82 308.9 301 57.1
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 1.3e-81 308.1 260 62.7
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 3.3e-77 293.5 603 38.0
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 1.8e-75 287.7 198 70.2
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 2.9e-65 253.8 202 60.4
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 5.9e-50 203.0 335 40.9
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 3.0e-49 200.7 436 36.9
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 1.2e-42 178.7 169 58.0
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 4.0e-38 163.7 146 56.8
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 5.8e-37 159.8 202 41.1
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 1.5e-21 108.6 64 78.1

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings