Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050166 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D043319 6.1e-82 307.4 149 100.0
CSS0004527 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D043319 8.3e-63 243.8 160 79.4
Actinidia26156 Actinidia chinensis HOM05D002874 ORTHO05D003250 3.6e-18 95.5 84 59.5
vmacro19881 Vaccinium macrocarpon HOM05D002874 ORTHO05D003250 2.6e-16 89.4 112 48.2
Actinidia06462 Actinidia chinensis HOM05D002874 ORTHO05D003250 4.5e-16 88.6 115 45.2
Dinv24303 Davidia involucrata HOM05D002874 ORTHO05D003250 4.5e-16 88.6 158 40.5
Rhsim05G0106200 Rhododendron simsii HOM05D002874 ORTHO05D003250 2.9e-15 85.9 90 56.7
COL.COLO4_11715 Corchorus olitorius HOM05D002874 ORTHO05D003250 1.1e-11 73.9 48 66.7
BraA03t15313Z Brassica rapa HOM05D002874 ORTHO05D003250 2.5e-11 72.8 34 73.5
Gorai.013G041100 Gossypium raimondii HOM05D002874 ORTHO05D003250 2.5e-11 72.8 48 62.5
THA.LOC104807351 Tarenaya hassleriana HOM05D002874 ORTHO05D003250 2.5e-11 72.8 34 76.5
Gohir.A13G038000 Gossypium hirsutum HOM05D002874 ORTHO05D003250 3.3e-11 72.4 48 62.5
Gohir.D13G036400 Gossypium hirsutum HOM05D002874 ORTHO05D003250 3.3e-11 72.4 48 62.5
Thecc.02G096400 Theobroma cacao HOM05D002874 ORTHO05D003250 9.6e-11 70.9 48 60.4
CARHR242040 Cardamine hirsuta HOM05D002874 ORTHO05D003250 1.3e-10 70.5 64 53.1
BcaNung02905 Brassica carinata HOM05D002874 ORTHO05D003250 1.6e-10 70.1 64 46.9
C07p60060 Brassica napus HOM05D002874 ORTHO05D003250 1.6e-10 70.1 64 46.9
Gohir.D01G006200 Gossypium hirsutum HOM05D002874 ORTHO05D003250 1.6e-10 70.1 45 62.2
Gorai.002G007200 Gossypium raimondii HOM05D002874 ORTHO05D003250 1.6e-10 70.1 45 62.2
Sp7g31670 Schrenkiella parvula HOM05D002874 ORTHO05D003250 2.1e-10 69.7 67 49.3
A03p62460 Brassica napus HOM05D002874 ORTHO05D003250 2.8e-10 69.3 54 50.0
Gohir.A01G006100 Gossypium hirsutum HOM05D002874 ORTHO05D003250 2.8e-10 69.3 45 62.2
Solyc01g103970.4 Solanum lycopersicum HOM05D002874 ORTHO05D003250 2.8e-10 69.3 59 50.8
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 3.7e-10 68.9 48 60.4
BcaNung04335 Brassica carinata HOM05D002874 ORTHO05D003250 4.8e-10 68.6 43 58.1
PGSC0003DMG400023801 Solanum tuberosum HOM05D002874 ORTHO05D003250 4.8e-10 68.6 61 50.8
TWI75G1683 Tripterygium wilfordii HOM05D002874 ORTHO05D003250 6.2e-10 68.2 79 43.0
Nitab4.5_0001744g0040 Nicotiana tabacum HOM05D002874 ORTHO05D003250 1.1e-09 67.4 50 54.0
Peaxi162Scf00011g00065 Petunia axillaris HOM05D002874 ORTHO05D003250 1.1e-09 67.4 39 64.1
Thhalv10026077m.g Eutrema salsugineum HOM05D002874 ORTHO05D003250 1.4e-09 67.0 71 46.5
Carub.0007s0648 Capsella rubella HOM05D002874 ORTHO05D003250 6.9e-09 64.7 45 55.6
Cpa.g.sc62.42 Carica papaya HOM05D002874 ORTHO05D003250 6.9e-09 64.7 61 45.9
Cc02_g22760 Coffea canephora HOM05D002874 ORTHO05D003250 9.0e-09 64.3 32 71.9
A01p04460 Brassica napus HOM05D002874 ORTHO05D003250 1.2e-08 63.9 59 40.7
BraA01t00433Z Brassica rapa HOM05D002874 ORTHO05D003250 1.2e-08 63.9 59 40.7
Manes.15G142950 Manihot esculenta HOM05D002874 ORTHO05D003250 1.2e-08 63.9 66 47.0
DCAR_006694 Daucus carota HOM05D002874 ORTHO05D003250 1.5e-08 63.5 48 54.2
AL7G17480 Arabidopsis lyrata HOM05D002874 ORTHO05D003250 2.6e-08 62.8 58 48.3
Potri.004G143900 Populus trichocarpa HOM05D002874 ORTHO05D003250 2.6e-08 62.8 59 45.8
C01p04850 Brassica napus HOM05D002874 ORTHO05D003250 3.4e-08 62.4 71 40.8
Rhsim07G0166200 Rhododendron simsii HOM05D002874 ORTHO05D003250 3.4e-08 62.4 29 75.9
Sabra04G0095400 Salix brachista HOM05D002874 ORTHO05D003250 3.4e-08 62.4 32 68.8
BolC1t00469H Brassica oleracea HOM05D002874 ORTHO05D003250 4.5e-08 62.0 71 40.8
Ciclev10029827m.g Citrus clementina HOM05D002874 ORTHO05D003250 4.5e-08 62.0 74 45.9
Dinv24301 Davidia involucrata HOM05D002874 ORTHO05D003250 4.5e-08 62.0 74 43.2
Eucgr.I01172 Eucalyptus grandis HOM05D002874 ORTHO05D003250 4.5e-08 62.0 33 63.6
Actinidia39025 Actinidia chinensis HOM05D002874 ORTHO05D003250 5.8e-08 61.6 77 45.5
Ah.05g178590 Amaranthus hybridus HOM05D002874 ORTHO05D003250 5.8e-08 61.6 32 68.8
Nn1g08358 Nelumbo nucifera HOM05D002874 ORTHO05D003250 5.8e-08 61.6 33 60.6
ECA240G2758 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.6e-08 61.2 96 38.5
Pp3c4_27320 Physcomitrium patens HOM05D002874 ORTHO05D003250 7.6e-08 61.2 42 47.6
Atru.chr5.2783 Acer truncatum HOM05D002874 ORTHO05D003250 9.9e-08 60.8 40 50.0
Atru.chr5.2798 Acer truncatum HOM05D002874 ORTHO05D003250 9.9e-08 60.8 40 50.0
AT4G33940 Arabidopsis thaliana HOM05D002874 ORTHO05D003250 9.9e-08 60.8 57 45.6
Hma1.2p1_0217F.1_g092230 Hydrangea macrophylla HOM05D002874 ORTHO05D003250 1.3e-07 60.5 60 51.7
Hma1.2p1_2221F.1_g317360 Hydrangea macrophylla HOM05D002874 ORTHO05D003250 1.3e-07 60.5 60 51.7
vmacro05120 Vaccinium macrocarpon HOM05D002874 ORTHO05D003250 1.7e-07 60.1 130 31.5
Cc02_g22750 Coffea canephora HOM05D002874 ORTHO05D003250 2.9e-07 59.3 33 57.6
Rhsim07G0166100 Rhododendron simsii HOM05D002874 ORTHO05D003250 2.9e-07 59.3 74 39.2
SEGI_08350 Sequoiadendron giganteum HOM05D002874 ORTHO05D003250 2.9e-07 59.3 34 50.0
SEGI_23344 Sequoiadendron giganteum HOM05D002874 ORTHO05D003250 2.9e-07 59.3 34 50.0
HanXRQChr06g0181251 Helianthus annuus HOM05D002874 ORTHO05D003250 3.8e-07 58.9 42 52.4
CSS0000541 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D003250 4.9e-07 58.5 93 40.9
CSS0036415 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D003250 4.9e-07 58.5 93 40.9
CAN.G11.39 Capsicum annuum HOM05D002874 ORTHO05D003250 4.9e-07 58.5 49 55.1
Hma1.2p1_0349F.1_g132050 Hydrangea macrophylla HOM05D002874 ORTHO05D003250 4.9e-07 58.5 31 67.7
Lj5P254T61 Lonicera japonica HOM05D002874 ORTHO05D003250 4.9e-07 58.5 45 51.1
Nitab4.5_0008061g0010 Nicotiana tabacum HOM05D002874 ORTHO05D003250 4.9e-07 58.5 44 52.3
Aqoxy6G00106 Aquilegia oxysepala HOM05D002874 ORTHO05D003250 6.4e-07 58.2 29 62.1
MSTRG.3584 Avicennia marina HOM05D002874 ORTHO05D003250 6.4e-07 58.2 74 39.2
Nitab4.5_0001744g0010 Nicotiana tabacum HOM05D002874 ORTHO05D003250 8.4e-07 57.8 62 40.3
Nitab4.5_0007966g0010 Nicotiana tabacum HOM05D002874 ORTHO05D003250 8.4e-07 57.8 42 54.8
Solyc01g103980.4 Solanum lycopersicum HOM05D002874 ORTHO05D003250 8.4e-07 57.8 91 35.2
TAR628G0883 Trochodendron aralioides HOM05D002874 ORTHO05D003250 8.4e-07 57.8 30 56.7
MSTRG.16509 Avicennia marina HOM05D002874 ORTHO05D003250 1.1e-06 57.4 159 30.2
Oeu032245.1 Olea europaea HOM05D002874 ORTHO05D003250 1.1e-06 57.4 43 53.5
PGR142G2581 Punica granatum HOM05D002874 ORTHO05D003250 1.1e-06 57.4 60 40.0
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 1.4e-06 57.0 42 52.4
CANSAT56G0379 Cannabis sativa HOM05D002874 ORTHO05D003250 1.9e-06 56.6 28 64.3
CANSAT56G0446 Cannabis sativa HOM05D002874 ORTHO05D003250 1.9e-06 56.6 28 64.3
Migut.B00815 Erythranthe guttata HOM05D002874 ORTHO05D003250 1.9e-06 56.6 52 46.2
Sopen01g046380 Solanum pennellii HOM05D002874 ORTHO05D003250 1.9e-06 56.6 89 38.2
Peaxi162Scf00003g03946 Petunia axillaris HOM05D002874 ORTHO05D003250 2.4e-06 56.2 45 48.9
SMO347G0660 Selaginella moellendorffii HOM05D002874 ORTHO05D003250 2.4e-06 56.2 30 56.7
ATR0709G075 Amborella trichopoda HOM05D002874 ORTHO05D003250 3.2e-06 55.8 29 62.1
Dinv24302 Davidia involucrata HOM05D002874 ORTHO05D003250 3.2e-06 55.8 78 41.0
Nitab4.5_0008546g0010 Nicotiana tabacum HOM05D002874 ORTHO05D003250 3.2e-06 55.8 62 37.1
SGA_v2.0_scaffold110G31336 Striga asiatica HOM05D002874 ORTHO05D003250 4.2e-06 55.5 73 41.1
Duzib211G0598 Durio zibethinus HOM05D002874 ORTHO05D003250 5.5e-06 55.1 30 60.0
Lsat_1_v5_gn_7_78981 Lactuca sativa HOM05D002874 ORTHO05D003250 5.5e-06 55.1 61 42.6
Mapoly0062s0090 Marchantia polymorpha HOM05D002874 ORTHO05D003250 5.5e-06 55.1 33 54.5
MSTRG.1570 Avicennia marina HOM05D002874 ORTHO05D003250 7.1e-06 54.7 29 62.1
EL10Ac1g00137 Beta vulgaris HOM05D002874 ORTHO05D003250 7.1e-06 54.7 32 59.4
PGSC0003DMG400023800 Solanum tuberosum HOM05D002874 ORTHO05D003250 7.1e-06 54.7 92 32.6
Thecc.08G192600 Theobroma cacao HOM05D002874 ORTHO05D003250 7.1e-06 54.7 30 60.0
HPP92_003141 Vanilla planifolia HOM05D002874 ORTHO05D003250 7.1e-06 54.7 30 53.3
Gohir.A05G251600 Gossypium hirsutum HOM05D002874 ORTHO05D003250 9.3e-06 54.3 30 60.0
Gohir.D05G252200 Gossypium hirsutum HOM05D002874 ORTHO05D003250 9.3e-06 54.3 30 60.0
Gorai.009G265000 Gossypium raimondii HOM05D002874 ORTHO05D003250 9.3e-06 54.3 30 60.0

Acer truncatum (2 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (3 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (3 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (5 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (1 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (0 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings