Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049416 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 3.4e-155 551.6 275 100.0
CSS0047775 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 3.9e-127 458.4 264 89.8
CSS0018932 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 2.8e-125 452.2 264 88.6
Lj3C728G3 Lonicera japonica HOM05D004359 ORTHO05D005052 1.6e-120 436.4 258 85.3
CSS0047348 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 2.7e-120 435.6 264 83.0
Dinv44576 Davidia involucrata HOM05D004359 ORTHO05D005052 1.0e-119 433.7 270 82.6
CSS0043956 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 3.0e-119 432.2 277 83.8
Hma1.2p1_0549F.1_g177000 Hydrangea macrophylla HOM05D004359 ORTHO05D005052 5.2e-119 431.4 261 83.1
Actinidia40118 Actinidia chinensis HOM05D004359 ORTHO05D005052 1.5e-118 429.9 264 82.6
Cc03_g04290 Coffea canephora HOM05D004359 ORTHO05D005052 1.5e-118 429.9 261 82.0
TAR362G1241 Trochodendron aralioides HOM05D004359 ORTHO05D005052 2.0e-118 429.5 261 82.8
Actinidia04510 Actinidia chinensis HOM05D004359 ORTHO05D005052 9.8e-118 427.2 264 83.0
Nn6g34169 Nelumbo nucifera HOM05D004359 ORTHO05D005052 2.8e-117 425.6 261 82.0
GSVIVG01018042001 Vitis vinifera HOM05D004359 ORTHO05D005052 2.8e-117 425.6 261 82.8
vmacro08371 Vaccinium macrocarpon HOM05D004359 ORTHO05D005052 3.7e-117 425.2 261 83.5
Oeu064245.1 Olea europaea HOM05D004359 ORTHO05D005052 4.8e-117 424.9 267 79.0
Oeu064246.1 Olea europaea HOM05D004359 ORTHO05D005052 4.8e-117 424.9 267 79.0
Lsat_1_v5_gn_5_104320 Lactuca sativa HOM05D004359 ORTHO05D005052 1.1e-116 423.7 264 80.7
ECA234G1583 Erigeron canadensis HOM05D004359 ORTHO05D005052 1.4e-116 423.3 267 79.4
Rhsim04G0197200 Rhododendron simsii HOM05D004359 ORTHO05D005052 2.4e-116 422.5 265 80.4
HanXRQChr16g0513791 Helianthus annuus HOM05D004359 ORTHO05D005052 4.1e-116 421.8 261 80.5
HanXRQChr10g0294741 Helianthus annuus HOM05D004359 ORTHO05D005052 1.6e-115 419.9 267 79.0
CAN.G1437.8 Capsicum annuum HOM05D004359 ORTHO05D005052 2.0e-115 419.5 264 78.8
Peaxi162Scf00316g00517 Petunia axillaris HOM05D004359 ORTHO05D005052 2.0e-115 419.5 270 77.4
DCAR_027243 Daucus carota HOM05D004359 ORTHO05D005052 1.7e-114 416.4 261 80.1
Nitab4.5_0002541g0010 Nicotiana tabacum HOM05D004359 ORTHO05D005052 2.2e-114 416.0 260 79.2
RcHm_v2.0_Chr4g0387781 Rosa chinensis HOM05D004359 ORTHO05D005052 3.8e-114 415.2 259 79.5
PGSC0003DMG400006446 Solanum tuberosum HOM05D004359 ORTHO05D005052 3.8e-114 415.2 261 78.2
Cfa008449 Carpinus fangiana HOM05D004359 ORTHO05D005052 5.0e-114 414.8 261 79.3
QL06p000928 Quercus lobata HOM05D004359 ORTHO05D005052 6.5e-114 414.5 261 79.7
Solyc09g082680.3 Solanum lycopersicum HOM05D004359 ORTHO05D005052 6.5e-114 414.5 264 78.0
Sopen09g031540 Solanum pennellii HOM05D004359 ORTHO05D005052 6.5e-114 414.5 264 78.0
Os01g0773100 Oryza sativa ssp. japonica HOM05D004359 ORTHO05D005052 1.1e-113 413.7 260 79.6
PSO210G2230 Papaver somniferum HOM05D004359 ORTHO05D005052 3.2e-113 412.1 262 79.4
FvH4_4g01230 Fragaria vesca HOM05D004359 ORTHO05D005052 4.2e-113 411.8 257 80.2
CiPaw.01G195300 Carya illinoinensis HOM05D004359 ORTHO05D005052 5.5e-113 411.4 261 78.9
Lj6A646G73 Lonicera japonica HOM05D004359 ORTHO05D005052 5.5e-113 411.4 261 80.1
FAN12G0664 Fragaria x ananassa HOM05D004359 ORTHO05D005052 1.2e-112 410.2 257 80.5
FAN22G1739 Fragaria x ananassa HOM05D004359 ORTHO05D005052 1.2e-112 410.2 259 78.8
FAN17G0057 Fragaria x ananassa HOM05D004359 ORTHO05D005052 1.6e-112 409.8 259 79.2
Prupe.1G021300 Prunus persica HOM05D004359 ORTHO05D005052 1.6e-112 409.8 259 78.4
MD13G1199900 Malus domestica HOM05D004359 ORTHO05D005052 3.6e-112 408.7 261 78.9
Aqoxy5G00400 Aquilegia oxysepala HOM05D004359 ORTHO05D005052 4.7e-112 408.3 262 79.4
Lalb_Chr06g0160731 Lupinus albus HOM05D004359 ORTHO05D005052 4.7e-112 408.3 261 76.6
PSO170G6248 Papaver somniferum HOM05D004359 ORTHO05D005052 6.1e-112 407.9 262 78.6
ATR0665G111 Amborella trichopoda HOM05D004359 ORTHO05D005052 8.0e-112 407.5 257 78.6
Migut.N00211 Erythranthe guttata HOM05D004359 ORTHO05D005052 8.0e-112 407.5 271 77.1
MD16G1199900 Malus domestica HOM05D004359 ORTHO05D005052 8.0e-112 407.5 261 78.5
arahy.Tifrunner.gnm1.ann1.4267PD Arachis hypogaea HOM05D004359 ORTHO05D005052 3.0e-111 405.6 259 76.4
MSTRG.4062 Avicennia marina HOM05D004359 ORTHO05D005052 3.0e-111 405.6 258 78.7
Ciclev10004430m.g Citrus clementina HOM05D004359 ORTHO05D005052 8.8e-111 404.1 261 77.4
CiPaw.02G120800 Carya illinoinensis HOM05D004359 ORTHO05D005052 1.5e-110 403.3 257 79.4
Atru.chr4.2362 Acer truncatum HOM05D004359 ORTHO05D005052 2.6e-110 402.5 261 77.0
Cpa.g.sc44.123 Carica papaya HOM05D004359 ORTHO05D005052 2.6e-110 402.5 270 75.6
CDE07G0702 Ceratophyllum demersum HOM05D004359 ORTHO05D005052 2.6e-110 402.5 261 76.6
Lj5g0004472 Lotus japonicus HOM05D004359 ORTHO05D005052 1.3e-109 400.2 258 76.4
Zm00001eb370110 Zea mays HOM05D004359 ORTHO05D005052 2.2e-109 399.4 258 76.4
Glyma.10G243900 Glycine max HOM05D004359 ORTHO05D005052 2.8e-109 399.1 258 76.4
PGR004G1328 Punica granatum HOM05D004359 ORTHO05D005052 2.8e-109 399.1 261 75.9
Thecc.04G238800 Theobroma cacao HOM05D004359 ORTHO05D005052 2.8e-109 399.1 269 75.8
DCAR_030686 Daucus carota HOM05D004359 ORTHO05D005052 3.7e-109 398.7 261 75.9
DCAR_002367 Daucus carota HOM05D004359 ORTHO05D005052 6.3e-109 397.9 267 73.8
Glyma.20G150500 Glycine max HOM05D004359 ORTHO05D005052 6.3e-109 397.9 258 76.0
EL10Ac3g06499 Beta vulgaris HOM05D004359 ORTHO05D005052 1.1e-108 397.1 265 74.0
Phvul.007G061900 Phaseolus vulgaris HOM05D004359 ORTHO05D005052 1.1e-108 397.1 258 76.4
VMungo0720G0936 Vigna mungo HOM05D004359 ORTHO05D005052 1.4e-108 396.7 258 76.4
CANSAT78G1027 Cannabis sativa HOM05D004359 ORTHO05D005052 2.4e-108 396.0 267 76.0
MELO3C006500.2 Cucumis melo HOM05D004359 ORTHO05D005052 4.1e-108 395.2 261 75.1
arahy.Tifrunner.gnm1.ann1.GV821P Arachis hypogaea HOM05D004359 ORTHO05D005052 5.4e-108 394.8 273 72.2
Glyma.10G003000 Glycine max HOM05D004359 ORTHO05D005052 7.0e-108 394.4 261 73.9
TWI73G1293 Tripterygium wilfordii HOM05D004359 ORTHO05D005052 7.0e-108 394.4 261 75.9
ClCG05G004860 Citrullus lanatus HOM05D004359 ORTHO05D005052 9.1e-108 394.0 261 75.5
Nitab4.5_0000090g0250 Nicotiana tabacum HOM05D004359 ORTHO05D005052 1.2e-107 393.7 273 73.3
Psat6g204080 Pisum sativum HOM05D004359 ORTHO05D005052 1.2e-107 393.7 260 73.8
CsaV3_3G012900 Cucumis sativus L. HOM05D004359 ORTHO05D005052 1.6e-107 393.3 261 75.1
Eucgr.H03411 Eucalyptus grandis HOM05D004359 ORTHO05D005052 1.6e-107 393.3 258 77.1
SalBow2G3046 Salvia bowleyana HOM05D004359 ORTHO05D005052 3.5e-107 392.1 262 76.3
SalBow3G0915 Salvia bowleyana HOM05D004359 ORTHO05D005052 5.9e-107 391.3 273 74.7
Ca_10850_v3 Cicer arietinum L. HOM05D004359 ORTHO05D005052 7.7e-107 391.0 260 74.2
SGA_v2.0_scaffold79G25594 Striga asiatica HOM05D004359 ORTHO05D005052 1.0e-106 390.6 258 75.6
TPR.G26109 Trifolium pratense HOM05D004359 ORTHO05D005052 1.3e-106 390.2 260 74.2
Migut.G00384 Erythranthe guttata HOM05D004359 ORTHO05D005052 1.7e-106 389.8 269 74.3
Gohir.A09G219100 Gossypium hirsutum HOM05D004359 ORTHO05D005052 1.7e-106 389.8 258 76.7
MSTRG.21878 Avicennia marina HOM05D004359 ORTHO05D005052 5.0e-106 388.3 262 74.4
Medtr1g102840 Medicago truncatula HOM05D004359 ORTHO05D005052 8.6e-106 387.5 260 73.1
Lalb_Chr03g0037471 Lupinus albus HOM05D004359 ORTHO05D005052 1.5e-105 386.7 261 73.2
Sed0002276 Sechium edule HOM05D004359 ORTHO05D005052 4.2e-105 385.2 261 73.6
Manes.03G173100 Manihot esculenta HOM05D004359 ORTHO05D005052 5.5e-105 384.8 267 73.4
CSS0020739 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 9.5e-105 384.0 289 73.4
Sabra10G0061100 Salix brachista HOM05D004359 ORTHO05D005052 9.5e-105 384.0 271 70.1
Glyma.15G201600 Glycine max HOM05D004359 ORTHO05D005052 1.6e-104 383.3 261 72.8
SGA_v2.0_scaffold191G40427 Striga asiatica HOM05D004359 ORTHO05D005052 2.1e-104 382.9 277 71.8
Potri.010G081800 Populus trichocarpa HOM05D004359 ORTHO05D005052 2.8e-104 382.5 261 72.8
SEGI_08230 Sequoiadendron giganteum HOM05D004359 ORTHO05D005052 2.3e-103 379.4 261 72.0
SEGI_41464 Sequoiadendron giganteum HOM05D004359 ORTHO05D005052 2.3e-103 379.4 261 72.0
Haze_11233 Corylus avellana HOM05D004359 ORTHO05D005052 5.2e-103 378.3 237 80.6
CARHR003530 Cardamine hirsuta HOM05D004359 ORTHO05D005052 6.8e-103 377.9 256 73.8
Duzib052G0975 Durio zibethinus HOM05D004359 ORTHO05D005052 1.5e-102 376.7 258 74.8
Phvul.007G278300 Phaseolus vulgaris HOM05D004359 ORTHO05D005052 2.6e-102 375.9 263 69.6
Sc19g0003940 Simmondsia chinensis HOM05D004359 ORTHO05D005052 2.6e-102 375.9 240 80.0
VMungo0720G0919 Vigna mungo HOM05D004359 ORTHO05D005052 3.4e-102 375.6 261 69.7
AL1G13800 Arabidopsis lyrata HOM05D004359 ORTHO05D005052 7.5e-102 374.4 261 72.4
A08p37060 Brassica napus HOM05D004359 ORTHO05D005052 1.3e-101 373.6 258 73.3
Carub.0001s0339 Capsella rubella HOM05D004359 ORTHO05D005052 2.9e-101 372.5 263 71.9
Gorai.006G242500 Gossypium raimondii HOM05D004359 ORTHO05D005052 3.7e-101 372.1 286 68.9
BcaC05g24464 Brassica carinata HOM05D004359 ORTHO05D005052 4.9e-101 371.7 263 71.9
Sp1g03020 Schrenkiella parvula HOM05D004359 ORTHO05D005052 8.3e-101 370.9 263 71.5
Thhalv10006925m.g Eutrema salsugineum HOM05D004359 ORTHO05D005052 1.1e-100 370.5 271 70.8
COL.COLO4_21565 Corchorus olitorius HOM05D004359 ORTHO05D005052 1.8e-100 369.8 241 78.0
C05p02410 Brassica napus HOM05D004359 ORTHO05D005052 1.2e-99 367.1 258 72.1
CSS0027981 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 1.6e-99 366.7 277 73.6
BolC5t29020H Brassica oleracea HOM05D004359 ORTHO05D005052 2.0e-99 366.3 258 71.7
BcaC05g24462 Brassica carinata HOM05D004359 ORTHO05D005052 2.7e-99 365.9 258 71.7
THA.LOC104826064 Tarenaya hassleriana HOM05D004359 ORTHO05D005052 3.5e-99 365.5 260 71.5
BcaC07g36931 Brassica carinata HOM05D004359 ORTHO05D005052 1.0e-98 364.0 258 71.7
C08p00930 Brassica napus HOM05D004359 ORTHO05D005052 1.0e-98 364.0 258 71.7
BolC8t46894H Brassica oleracea HOM05D004359 ORTHO05D005052 2.9e-98 362.5 258 71.3
Aa31LG1G20640 Aethionema arabicum HOM05D004359 ORTHO05D005052 3.9e-98 362.1 256 71.1
AUR62038653 Chenopodium quinoa HOM05D004359 ORTHO05D005052 2.0e-94 349.7 248 72.6
unitig_736.g22459 Utricularia gibba HOM05D004359 ORTHO05D005052 4.9e-93 345.1 256 68.8
SMO340G0218 Selaginella moellendorffii HOM05D004359 ORTHO05D005052 3.2e-92 342.4 257 66.9
HPP92_015636 Vanilla planifolia HOM05D004359 ORTHO05D005052 4.1e-92 342.0 230 76.1
AagrBONN_evm.TU.Sc2ySwM_228.2874 Anthoceros agrestis HOM05D004359 ORTHO05D005052 1.6e-91 340.1 268 64.2
CDE04G1738 Ceratophyllum demersum HOM05D004359 ORTHO05D005052 1.6e-91 340.1 254 70.9
AUR62032000 Chenopodium quinoa HOM05D004359 ORTHO05D005052 7.8e-91 337.8 248 70.2
Ah.04g154140 Amaranthus hybridus HOM05D004359 ORTHO05D005052 1.7e-90 336.7 245 71.4
Zm00001eb151770 Zea mays HOM05D004359 ORTHO05D005052 3.9e-90 335.5 258 68.2
Duzib212G0656 Durio zibethinus HOM05D004359 ORTHO05D005052 2.5e-89 332.8 234 73.9
Gohir.D09G221300 Gossypium hirsutum HOM05D004359 ORTHO05D005052 1.7e-82 310.1 213 75.6
CBR_g41568 Chara braunii HOM05D004359 ORTHO05D005052 1.4e-76 290.4 306 51.0
Mapoly0021s0008 Marchantia polymorpha HOM05D004359 ORTHO05D005052 1.2e-75 287.3 258 58.1
A10p02630 Brassica napus HOM05D004359 ORTHO05D005052 1.6e-75 287.0 256 60.5
Dinv14046 Davidia involucrata HOM05D004359 ORTHO05D005052 7.1e-68 261.5 172 80.8
Manes.15G033000 Manihot esculenta HOM05D004359 ORTHO05D005052 4.2e-60 235.7 258 52.3
AUR62033626 Chenopodium quinoa HOM05D004359 ORTHO05D005052 1.6e-59 233.8 248 56.0
AT1G04200 Arabidopsis thaliana HOM05D004359 ORTHO05D005052 3.5e-59 232.6 174 70.7
unitig_899.g14876 Utricularia gibba HOM05D004359 ORTHO05D005052 9.6e-57 224.6 187 63.1
SEGI_13286 Sequoiadendron giganteum HOM05D004359 ORTHO05D005052 1.6e-48 197.2 191 58.1
FAN17G0101 Fragaria x ananassa HOM05D004359 ORTHO05D005052 4.8e-48 195.7 119 78.2
Sabra08G0120100 Salix brachista HOM05D004359 ORTHO05D005052 4.8e-40 169.1 240 46.2
RcHm_v2.0_Chr4g0393601 Rosa chinensis HOM05D004359 ORTHO05D005052 5.5e-36 155.6 141 62.4
SHI00525 Sapria himalayana HOM05D004359 ORTHO05D005052 3.8e-29 132.9 163 47.9
SHI00526 Sapria himalayana HOM05D004359 ORTHO05D005052 1.1e-25 121.3 120 57.5
Hma1.2p1_0549F.1_g177020 Hydrangea macrophylla HOM05D004359 ORTHO05D005052 2.3e-18 97.1 131 50.4
RcHm_v2.0_Chr4g0393591 Rosa chinensis HOM05D004359 ORTHO05D005052 2.0e-14 84.0 48 77.1
FAN13G0820 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.0e-13 79.3 52 65.4
FAN13G1580 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.0e-13 79.3 52 65.4
COL.COLO4_15960 Corchorus olitorius HOM05D004359 ORTHO05D005052 4.7e-11 72.8 51 66.7
COL.COLO4_21093 Corchorus olitorius HOM05D004359 ORTHO05D005052 4.4e-09 66.2 37 83.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (7 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (3 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (3 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (4 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (3 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (3 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings