Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049222 Camellia sinensis var. sinensis HOM05D005378 ORTHO05D006986 3.6e-133 478.4 267 100.0
Dinv37717 Davidia involucrata HOM05D005378 ORTHO05D006986 2.5e-86 322.8 245 71.8
Hma1.2p1_2135F.1_g314860 Hydrangea macrophylla HOM05D005378 ORTHO05D006986 8.4e-82 307.8 245 68.6
TAR629G1125 Trochodendron aralioides HOM05D005378 ORTHO05D006986 1.3e-79 300.4 243 67.5
Haze_09001 Corylus avellana HOM05D005378 ORTHO05D006986 1.9e-78 296.6 237 68.8
Cfa012056 Carpinus fangiana HOM05D005378 ORTHO05D006986 2.1e-77 293.1 237 67.9
Gorai.004G205500 Gossypium raimondii HOM05D005378 ORTHO05D006986 8.1e-77 291.2 200 76.5
Gohir.D08G194800 Gossypium hirsutum HOM05D005378 ORTHO05D006986 1.1e-76 290.8 200 76.0
Ciclev10021134m.g Citrus clementina HOM05D005378 ORTHO05D006986 1.4e-76 290.4 200 74.5
DCAR_006775 Daucus carota HOM05D005378 ORTHO05D006986 3.1e-76 289.3 202 74.8
Duzib205G1930 Durio zibethinus HOM05D005378 ORTHO05D006986 3.1e-76 289.3 249 65.9
Gohir.A08G176000 Gossypium hirsutum HOM05D005378 ORTHO05D006986 4.0e-76 288.9 200 75.5
Manes.02G028800 Manihot esculenta HOM05D005378 ORTHO05D006986 4.0e-76 288.9 243 63.8
Prupe.5G084900 Prunus persica HOM05D005378 ORTHO05D006986 1.2e-75 287.3 236 69.1
Glyma.05G055000 Glycine max HOM05D005378 ORTHO05D006986 1.5e-75 287.0 200 75.0
Thecc.03G266200 Theobroma cacao HOM05D005378 ORTHO05D006986 1.5e-75 287.0 245 71.0
CiPaw.11G143700 Carya illinoinensis HOM05D005378 ORTHO05D006986 2.6e-75 286.2 243 69.5
VMungo0251G1120 Vigna mungo HOM05D005378 ORTHO05D006986 3.4e-75 285.8 183 77.0
Eucgr.E00505 Eucalyptus grandis HOM05D005378 ORTHO05D006986 4.4e-75 285.4 167 83.2
Potri.003G118400 Populus trichocarpa HOM05D005378 ORTHO05D006986 5.8e-75 285.0 189 75.7
QL12p016275 Quercus lobata HOM05D005378 ORTHO05D006986 5.8e-75 285.0 237 66.2
Lj2A203G52 Lonicera japonica HOM05D005378 ORTHO05D006986 1.7e-74 283.5 269 61.0
Potri.001G113800 Populus trichocarpa HOM05D005378 ORTHO05D006986 2.2e-74 283.1 266 61.3
PGSC0003DMG400003914 Solanum tuberosum HOM05D005378 ORTHO05D006986 3.8e-74 282.3 235 64.3
Phvul.003G217000 Phaseolus vulgaris HOM05D005378 ORTHO05D006986 1.1e-73 280.8 243 64.6
CsaV3_3G003410 Cucumis sativus L. HOM05D005378 ORTHO05D006986 1.9e-73 280.0 234 65.4
Nn6g34347 Nelumbo nucifera HOM05D005378 ORTHO05D006986 3.2e-73 279.3 189 74.1
Sabra03G0082400 Salix brachista HOM05D005378 ORTHO05D006986 4.2e-73 278.9 191 74.9
arahy.Tifrunner.gnm1.ann1.1K1ZSN Arachis hypogaea HOM05D005378 ORTHO05D006986 5.4e-73 278.5 186 75.8
PGR042G0099 Punica granatum HOM05D005378 ORTHO05D006986 5.4e-73 278.5 195 73.8
Cpa.g.sc29.47 Carica papaya HOM05D005378 ORTHO05D006986 7.1e-73 278.1 196 72.4
Rhsim10G0118700 Rhododendron simsii HOM05D005378 ORTHO05D006986 7.1e-73 278.1 194 75.8
TWI60G1116 Tripterygium wilfordii HOM05D005378 ORTHO05D006986 7.1e-73 278.1 236 63.1
arahy.Tifrunner.gnm1.ann1.2GQ0W5 Arachis hypogaea HOM05D005378 ORTHO05D006986 9.3e-73 277.7 186 75.8
Atru.chr9.1492 Acer truncatum HOM05D005378 ORTHO05D006986 1.2e-72 277.3 185 74.6
Psat4g069440 Pisum sativum HOM05D005378 ORTHO05D006986 1.6e-72 276.9 181 79.0
Nitab4.5_0005167g0010 Nicotiana tabacum HOM05D005378 ORTHO05D006986 2.7e-72 276.2 243 68.7
Sopen08g028190 Solanum pennellii HOM05D005378 ORTHO05D006986 3.5e-72 275.8 236 63.6
Nitab4.5_0012494g0030 Nicotiana tabacum HOM05D005378 ORTHO05D006986 4.6e-72 275.4 238 68.9
CAN.G630.23 Capsicum annuum HOM05D005378 ORTHO05D006986 6.0e-72 275.0 235 68.9
MD04G1072900 Malus domestica HOM05D005378 ORTHO05D006986 7.9e-72 274.6 241 65.1
TPR.G37594 Trifolium pratense HOM05D005378 ORTHO05D006986 7.9e-72 274.6 181 77.9
GSVIVG01019902001 Vitis vinifera HOM05D005378 ORTHO05D006986 1.7e-71 273.5 166 81.3
Lj4g0009345 Lotus japonicus HOM05D005378 ORTHO05D006986 2.3e-71 273.1 243 70.8
Medtr4g101820 Medicago truncatula HOM05D005378 ORTHO05D006986 3.0e-71 272.7 179 77.7
RcHm_v2.0_Chr7g0200231 Rosa chinensis HOM05D005378 ORTHO05D006986 3.0e-71 272.7 236 68.2
Sabra01G0087000 Salix brachista HOM05D005378 ORTHO05D006986 3.9e-71 272.3 243 62.1
Solyc08g079830.4 Solanum lycopersicum HOM05D005378 ORTHO05D006986 6.6e-71 271.6 234 63.7
Aqoxy7G00527 Aquilegia oxysepala HOM05D005378 ORTHO05D006986 8.7e-71 271.2 196 70.9
Lalb_Chr05g0225201 Lupinus albus HOM05D005378 ORTHO05D006986 1.9e-70 270.0 243 63.4
Oeu001912.1 Olea europaea HOM05D005378 ORTHO05D006986 2.5e-70 269.6 236 67.4
Cc08_g13620 Coffea canephora HOM05D005378 ORTHO05D006986 3.3e-70 269.2 248 60.5
Ca_12295_v3 Cicer arietinum L. HOM05D005378 ORTHO05D006986 4.3e-70 268.9 181 76.8
Hund14698 Selenicereus undatus HOM05D005378 ORTHO05D006986 4.3e-70 268.9 201 72.1
CANSAT21G0731 Cannabis sativa HOM05D005378 ORTHO05D006986 1.6e-69 266.9 236 64.0
FvH4_5g01090 Fragaria vesca HOM05D005378 ORTHO05D006986 1.6e-69 266.9 163 80.4
FAN18G4319 Fragaria x ananassa HOM05D005378 ORTHO05D006986 1.6e-69 266.9 163 80.4
MD00G1069800 Malus domestica HOM05D005378 ORTHO05D006986 2.1e-69 266.5 186 70.4
THA.LOC104818281 Tarenaya hassleriana HOM05D005378 ORTHO05D006986 2.1e-69 266.5 203 69.5
ClCG00G000130 Citrullus lanatus HOM05D005378 ORTHO05D006986 3.6e-69 265.8 183 73.8
ClCG10G003380 Citrullus lanatus HOM05D005378 ORTHO05D006986 3.6e-69 265.8 183 73.8
SalBow6G7208 Salvia bowleyana HOM05D005378 ORTHO05D006986 1.8e-68 263.5 254 65.4
MSTRG.25561 Avicennia marina HOM05D005378 ORTHO05D006986 2.4e-68 263.1 246 67.1
Sc01g0008970 Simmondsia chinensis HOM05D005378 ORTHO05D006986 3.1e-68 262.7 201 70.1
PGR031G2614 Punica granatum HOM05D005378 ORTHO05D006986 1.5e-67 260.4 196 68.4
ECA233G4179 Erigeron canadensis HOM05D005378 ORTHO05D006986 3.4e-67 259.2 197 67.0
FAN13G1015 Fragaria x ananassa HOM05D005378 ORTHO05D006986 4.5e-67 258.8 244 60.7
HanXRQChr02g0047721 Helianthus annuus HOM05D005378 ORTHO05D006986 4.5e-67 258.8 250 58.0
Sed0008997 Sechium edule HOM05D005378 ORTHO05D006986 4.5e-67 258.8 244 63.1
SGA_v2.0_scaffold37G14872 Striga asiatica HOM05D005378 ORTHO05D006986 2.9e-66 256.1 235 60.9
EL10Ac5g12674 Beta vulgaris HOM05D005378 ORTHO05D006986 3.8e-66 255.8 246 62.2
Migut.A00880 Erythranthe guttata HOM05D005378 ORTHO05D006986 2.4e-65 253.1 251 56.6
MSTRG.12037 Avicennia marina HOM05D005378 ORTHO05D006986 9.3e-65 251.1 148 82.4
AL1G23870 Arabidopsis lyrata HOM05D005378 ORTHO05D006986 1.6e-64 250.4 201 66.7
Carub.0001s1221 Capsella rubella HOM05D005378 ORTHO05D006986 2.7e-64 249.6 204 66.2
AUR62017340 Chenopodium quinoa HOM05D005378 ORTHO05D006986 1.0e-63 247.7 193 67.9
Aa31LG2G450 Aethionema arabicum HOM05D005378 ORTHO05D006986 1.3e-63 247.3 183 69.4
PSO782G2812 Papaver somniferum HOM05D005378 ORTHO05D006986 1.3e-63 247.3 197 67.5
BcaB03g13183 Brassica carinata HOM05D005378 ORTHO05D006986 1.8e-63 246.9 183 68.9
FAN08G1559 Fragaria x ananassa HOM05D005378 ORTHO05D006986 1.8e-63 246.9 282 55.7
Oeu001910.1 Olea europaea HOM05D005378 ORTHO05D006986 2.3e-63 246.5 164 73.8
Sp1g11100 Schrenkiella parvula HOM05D005378 ORTHO05D006986 6.7e-63 245.0 244 61.9
Zm00001eb073490 Zea mays HOM05D005378 ORTHO05D006986 1.1e-62 244.2 152 76.3
AT1G12520 Arabidopsis thaliana HOM05D005378 ORTHO05D006986 1.5e-62 243.8 200 66.0
C08p15470 Brassica napus HOM05D005378 ORTHO05D006986 1.5e-62 243.8 184 69.0
BolC8t49175H Brassica oleracea HOM05D005378 ORTHO05D006986 1.5e-62 243.8 184 69.0
A08p32790 Brassica napus HOM05D005378 ORTHO05D006986 2.5e-62 243.0 184 69.0
CARHR012800 Cardamine hirsuta HOM05D005378 ORTHO05D006986 5.6e-62 241.9 175 70.3
MELO3C014007.2 Cucumis melo HOM05D005378 ORTHO05D006986 5.6e-62 241.9 260 56.9
Thhalv10008232m.g Eutrema salsugineum HOM05D005378 ORTHO05D006986 5.6e-62 241.9 174 70.7
Peaxi162Scf00620g00241 Petunia axillaris HOM05D005378 ORTHO05D006986 5.6e-62 241.9 145 78.6
BraA08t35202Z Brassica rapa HOM05D005378 ORTHO05D006986 9.6e-62 241.1 184 68.5
PSO478G1428 Papaver somniferum HOM05D005378 ORTHO05D006986 2.8e-61 239.6 202 64.9
BcaC07g41696 Brassica carinata HOM05D005378 ORTHO05D006986 3.7e-61 239.2 182 66.5
Lsat_1_v5_gn_6_10640 Lactuca sativa HOM05D005378 ORTHO05D006986 1.1e-60 237.7 175 70.3
BolC8t52274H Brassica oleracea HOM05D005378 ORTHO05D006986 1.4e-60 237.3 245 55.9
C08p47320 Brassica napus HOM05D005378 ORTHO05D006986 3.1e-60 236.1 245 55.5
AUR62010552 Chenopodium quinoa HOM05D005378 ORTHO05D006986 3.1e-60 236.1 167 73.1
Ah.12g057930 Amaranthus hybridus HOM05D005378 ORTHO05D006986 5.3e-60 235.3 141 79.4
BcaB08g34272 Brassica carinata HOM05D005378 ORTHO05D006986 2.0e-59 233.4 201 62.7
BraA09t41728Z Brassica rapa HOM05D005378 ORTHO05D006986 2.0e-59 233.4 174 67.2
A09p63820 Brassica napus HOM05D005378 ORTHO05D006986 7.6e-59 231.5 237 57.8
ATR0757G076 Amborella trichopoda HOM05D005378 ORTHO05D006986 1.0e-58 231.1 139 79.1
Actinidia02066 Actinidia chinensis HOM05D005378 ORTHO05D006986 2.9e-58 229.6 156 76.9
COL.COLO4_23814 Corchorus olitorius HOM05D005378 ORTHO05D006986 1.0e-55 221.1 208 60.6
SEGI_32640 Sequoiadendron giganteum HOM05D005378 ORTHO05D006986 1.8e-55 220.3 148 70.9
HPP92_021079 Vanilla planifolia HOM05D005378 ORTHO05D006986 1.1e-54 217.6 177 62.1
CDE01G0558 Ceratophyllum demersum HOM05D005378 ORTHO05D006986 6.3e-53 211.8 149 69.1
Mapoly0127s0018 Marchantia polymorpha HOM05D005378 ORTHO05D006986 2.4e-52 209.9 155 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1340 Anthoceros agrestis HOM05D005378 ORTHO05D006986 2.6e-51 206.5 153 64.7
Os04g0573200 Oryza sativa ssp. japonica HOM05D005378 ORTHO05D006986 1.2e-48 197.6 131 73.3
Pp3c18_10490 Physcomitrium patens HOM05D005378 ORTHO05D006986 6.1e-48 195.3 164 57.9
Pp3c21_8100 Physcomitrium patens HOM05D005378 ORTHO05D006986 3.9e-47 192.6 139 64.7
SMO201G0146 Selaginella moellendorffii HOM05D005378 ORTHO05D006986 4.3e-46 189.1 140 67.1
unitig_744.g24326 Utricularia gibba HOM05D005378 ORTHO05D006986 4.5e-43 179.1 120 71.7
Actinidia14494 Actinidia chinensis HOM05D005378 ORTHO05D006986 2.9e-42 176.4 97 87.6
Atru.chr3.15 Acer truncatum HOM05D000534 ORTHO05D000389 1.1e-41 174.5 112 78.6
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 2.5e-41 173.3 113 77.0
Atru.chr7.434 Acer truncatum HOM05D005378 ORTHO05D006986 3.2e-41 172.9 106 82.1
TAR374G0182 Trochodendron aralioides HOM05D005378 ORTHO05D006986 1.4e-31 141.0 144 52.8
CBR_g27778 Chara braunii HOM05D005378 ORTHO05D006986 5.3e-28 129.0 188 39.4
unitig_22.g5478 Utricularia gibba HOM05D002871 ORTHO05D003307 1.7e-26 124.0 108 61.1
BolC4t24476H Brassica oleracea HOM05D005378 ORTHO05D006986 1.5e-22 110.9 66 78.8
Atru.chr3.3516 Acer truncatum HOM05D005378 ORTHO05D006986 1.3e-21 107.8 62 82.3
BcaC06g31923 Brassica carinata HOM05D005378 ORTHO05D006986 8.2e-21 105.1 78 62.8
BcaC04g22737 Brassica carinata HOM05D005378 ORTHO05D006986 1.6e-19 100.9 63 69.8
C09p15780 Brassica napus HOM05D005378 ORTHO05D006986 1.6e-19 100.9 63 69.8
BolC9t54490H Brassica oleracea HOM05D005378 ORTHO05D006986 1.6e-19 100.9 63 69.8
Migut.D00824 Erythranthe guttata HOM05D005378 ORTHO05D006986 6.5e-18 95.5 75 62.7
A09p13280 Brassica napus HOM05D005378 ORTHO05D006986 4.2e-17 92.8 63 66.7
BraA09t36976Z Brassica rapa HOM05D005378 ORTHO05D006986 4.2e-17 92.8 63 66.7
AagrBONN_evm.TU.Sc2ySwM_228.914 Anthoceros agrestis HOM05D005378 ORTHO05D006986 1.2e-14 84.7 61 63.9
Oeu001911.1 Olea europaea HOM05D005378 ORTHO05D006986 3.1e-12 76.6 41 85.4
Pp3c17_14500 Physcomitrium patens HOM05D005378 ORTHO05D001264 1.3e-10 71.2 65 52.3
Atru.chr5.2888 Acer truncatum HOM05D005378 ORTHO05D037884 6.5e-10 68.9 44 77.3
Mapoly0152s0017 Marchantia polymorpha HOM05D005378 ORTHO05D006986 6.5e-10 68.9 102 37.3
Atru.chr6.1840 Acer truncatum HOM05D005378 ORTHO05D037884 1.4e-07 61.2 36 80.6
CBR_g48191 Chara braunii HOM05D005378 ORTHO05D000399 5.2e-07 59.3 66 34.8
CANSAT64G0315 Cannabis sativa HOM05D001405 ORTHO05D001264 2.0e-06 57.4 85 41.2
Lj3g0018098 Lotus japonicus HOM05D000262 ORTHO05D000300 2.6e-06 57.0 63 44.4
Sabra09G0002300 Salix brachista HOM05D001405 ORTHO05D001264 5.7e-06 55.8 103 35.9
HPP92_025381 Vanilla planifolia HOM05D001405 ORTHO05D001264 5.7e-06 55.8 111 34.2
EL10Ac9g22624 Beta vulgaris HOM05D001405 ORTHO05D001264 7.5e-06 55.5 97 37.1
Peaxi162Scf00983g00213 Petunia axillaris HOM05D001405 ORTHO05D001264 9.8e-06 55.1 101 37.6
PGR042G0027 Punica granatum HOM05D000262 ORTHO05D000300 9.8e-06 55.1 63 39.7
Sc21g0000320 Simmondsia chinensis HOM05D001405 ORTHO05D001264 9.8e-06 55.1 97 37.1

Acer truncatum (7 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (2 genes)
Brassica carinata (5 genes)
Brassica napus (6 genes)
Brassica oleracea (4 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (3 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (3 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (3 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings