Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 2.1e-270 935.3 527 100.0
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 1.4e-104 384.4 307 71.7
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.4e-101 374.4 308 66.6
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.9e-101 374.0 311 67.8
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.9e-101 374.0 311 67.8
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 4.2e-101 372.9 283 70.3
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 5.5e-101 372.5 283 71.4
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 1.2e-100 371.3 281 71.5
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 4.6e-100 369.4 312 65.7
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 7.9e-100 368.6 284 70.4
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 7.9e-100 368.6 281 71.2
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 1.0e-99 368.2 255 78.4
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 1.0e-99 368.2 281 71.2
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 1.8e-99 367.5 281 71.2
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 1.8e-99 367.5 281 71.2
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 3.9e-99 366.3 281 70.1
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 5.1e-99 365.9 308 65.3
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 6.7e-99 365.5 281 71.9
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 6.7e-99 365.5 281 70.8
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.1e-98 364.8 283 71.0
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 1.5e-98 364.4 316 67.1
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 2.5e-98 363.6 282 69.5
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 9.6e-98 361.7 281 69.4
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 1.3e-97 361.3 310 64.8
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 3.7e-97 359.8 309 63.8
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 8.2e-97 358.6 310 64.2
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 2.4e-96 357.1 285 69.1
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 4.1e-96 356.3 310 63.9
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 4.1e-96 356.3 309 64.7
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 5.3e-96 355.9 281 69.4
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 5.3e-96 355.9 308 64.3
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 6.9e-96 355.5 281 69.4
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 1.2e-95 354.8 282 68.4
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 1.2e-95 354.8 281 68.0
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 1.2e-95 354.8 285 69.1
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 1.5e-95 354.4 281 68.0
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 1.5e-95 354.4 311 64.0
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 2.6e-95 353.6 285 67.4
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 2.6e-95 353.6 285 67.4
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 4.5e-95 352.8 284 68.0
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 5.8e-95 352.4 281 68.3
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 7.6e-95 352.1 289 64.4
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 7.6e-95 352.1 284 67.3
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 1.3e-94 351.3 281 67.3
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.4
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 2.9e-94 350.1 281 67.6
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 2.9e-94 350.1 309 64.1
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 3.8e-94 349.7 311 63.0
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 5.0e-94 349.4 309 63.4
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 5.0e-94 349.4 282 65.2
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 8.4e-94 348.6 289 63.7
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 8.4e-94 348.6 281 68.3
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 8.4e-94 348.6 281 66.5
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 8.4e-94 348.6 289 64.0
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 8.4e-94 348.6 281 66.9
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 2.5e-93 347.1 309 63.1
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 1.2e-92 344.7 289 63.0
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 1.6e-92 344.4 280 66.1
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 6.1e-92 342.4 281 66.5
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 7.9e-92 342.0 281 66.2
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.0e-91 341.7 298 63.8
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 2.3e-91 340.5 281 65.1
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 7.4e-90 335.5 281 64.4
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 1.3e-89 334.7 294 63.6
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 2.2e-89 334.0 281 64.1
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 9.0e-88 328.6 257 70.4
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 9.0e-88 328.6 285 63.5
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 9.0e-88 328.6 285 63.5
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 4.5e-87 326.2 317 59.6
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 2.2e-86 323.9 296 61.1
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 2.9e-86 323.6 281 63.0
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 3.8e-86 323.2 280 62.5
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 5.0e-86 322.8 288 61.5
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 5.0e-86 322.8 283 61.5
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 4.2e-85 319.7 264 66.3
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 1.6e-84 317.8 286 60.5
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 2.1e-84 317.4 282 60.3
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 4.6e-84 316.2 284 61.3
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 3.9e-83 313.2 376 51.1
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 6.7e-83 312.4 293 59.4
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 1.1e-82 311.6 285 60.0
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 2.5e-82 310.5 255 65.1
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 3.3e-82 310.1 286 58.7
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 5.7e-82 309.3 334 55.4
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 2.8e-81 307.0 285 63.2
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 1.8e-80 304.3 282 62.1
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 2.6e-79 300.4 281 58.7
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 2.6e-79 300.4 284 57.0
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 3.4e-79 300.1 287 59.2
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 7.7e-79 298.9 283 59.4
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 2.9e-78 297.0 227 74.0
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 1.1e-74 285.0 201 79.6
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 2.2e-73 280.8 277 59.2
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 1.1e-72 278.5 257 60.3
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 2.6e-71 273.9 313 54.6
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 8.5e-70 268.9 285 58.2
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 2.5e-69 267.3 292 53.8
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 7.5e-66 255.8 229 62.9
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 9.7e-66 255.4 287 52.3
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 3.1e-64 250.4 228 58.8
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 4.1e-64 250.0 283 49.5
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 6.1e-60 236.1 292 46.2
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 3.4e-58 230.3 199 66.8
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 4.5e-55 219.9 231 57.1
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.5e-53 214.9 321 42.1
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 3.2e-53 213.8 265 49.8
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 2.7e-52 210.7 207 57.0
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 1.0e-51 208.8 192 63.5
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 1.0e-51 208.8 268 45.9
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.0e-51 208.8 282 46.1
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.4e-48 198.4 339 38.1
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 7.7e-47 192.6 282 42.6
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 3.8e-46 190.3 166 65.7
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.8e-46 190.3 318 39.0
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 4.3e-45 186.8 126 73.8
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.2e-44 185.3 172 60.5
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 4.7e-44 183.3 251 47.4
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 2.3e-43 181.0 294 37.1
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 1.3e-41 175.3 145 64.8
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 2.2e-33 147.9 284 35.9
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 1.6e-31 141.7 149 58.4
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 1.0e-30 139.0 299 33.1
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.3e-30 137.9 281 35.2
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 6.6e-30 136.3 103 66.0
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.3e-29 133.7 312 34.0
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-18 97.1 72 62.5
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 1.7e-17 95.1 49 91.8
Cpa.g.sc25.37 Carica papaya HOM05D001329 ORTHO05D004946 4.6e-15 87.0 48 85.4
SHI11143 Sapria himalayana HOM05D000023 ORTHO05D000014 8.6e-14 82.8 53 71.7
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.9e-13 81.6 84 50.0
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 9.6e-13 79.3 82 58.5
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 1.1e-11 75.9 53 66.0
SMO173G0061 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 3.1e-11 74.3 50 70.0
Oeu043914.1 Olea europaea HOM05D001329 ORTHO05D004946 5.2e-11 73.6 53 64.2
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 5.2e-11 73.6 92 46.7
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 1.2e-10 72.4 48 79.2
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 5.8e-10 70.1 178 32.6
RcHm_v2.0_Chr2g0141071 Rosa chinensis HOM05D001329 ORTHO05D004946 2.9e-09 67.8 54 59.3
RcHm_v2.0_Chr2g0141091 Rosa chinensis HOM05D001329 ORTHO05D004946 5.4e-08 63.5 49 67.3
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 4.6e-07 60.5 39 64.1
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.6e-07 60.5 121 33.1
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 2.3e-06 58.2 27 81.5
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-06 57.4 39 59.0
arahy.Tifrunner.gnm1.ann1.4Z5MNN Arachis hypogaea HOM05D001329 ORTHO05D004946 5.1e-06 57.0 39 74.4

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (3 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (3 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (3 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (3 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (3 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (8 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (3 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings